Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02101 Striga asiatica HOM05D006671 ORTHO05D008637 1.1e-300 1035.8 514 100.0
SalBow7G2314 Salvia bowleyana HOM05D006671 ORTHO05D008637 1.7e-219 766.1 528 73.3
MSTRG.9549 Avicennia marina HOM05D006671 ORTHO05D008637 4.1e-218 761.5 529 73.7
Migut.D00903 Erythranthe guttata HOM05D006671 ORTHO05D008637 7.0e-210 734.2 533 68.9
unitig_699.g19656 Utricularia gibba HOM05D006671 ORTHO05D001254 5.4e-186 654.8 511 64.6
vmacro18708 Vaccinium macrocarpon HOM05D006671 ORTHO05D008637 8.9e-181 637.5 539 60.9
CSS0038482 Camellia sinensis var. sinensis HOM05D006671 ORTHO05D008637 1.3e-179 633.6 540 59.3
Rhsim08G0246200 Rhododendron simsii HOM05D006671 ORTHO05D008637 4.9e-179 631.7 544 60.5
Cc04_g00530 Coffea canephora HOM05D006671 ORTHO05D008637 1.3e-176 623.6 535 60.2
CAN.G390.42 Capsicum annuum HOM05D006671 ORTHO05D008637 1.5e-175 620.2 537 61.5
PGSC0003DMG402028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 2.1e-174 616.3 537 61.8
Sopen12g024210 Solanum pennellii HOM05D006671 ORTHO05D008637 2.8e-174 615.9 537 60.7
Solyc12g055740.2 Solanum lycopersicum HOM05D006671 ORTHO05D008637 5.2e-173 611.7 537 60.5
PGSC0003DMG401028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 2.1e-169 599.7 537 60.5
TAR623G0926 Trochodendron aralioides HOM05D006671 ORTHO05D008637 7.8e-169 597.8 537 56.6
COL.COLO4_26801 Corchorus olitorius HOM05D006671 ORTHO05D008637 2.5e-167 592.8 536 58.4
Sc12g0010960 Simmondsia chinensis HOM05D006671 ORTHO05D008637 2.8e-166 589.3 532 57.7
Nn8g41287 Nelumbo nucifera HOM05D006671 ORTHO05D008637 4.4e-164 582.0 535 55.3
Gohir.D13G119900 Gossypium hirsutum HOM05D006671 ORTHO05D008637 7.6e-164 581.3 536 56.2
TPR.G26443 Trifolium pratense HOM05D006671 ORTHO05D008637 3.7e-163 578.9 539 56.4
CiPaw.03G010100 Carya illinoinensis HOM05D006671 ORTHO05D008637 8.3e-163 577.8 541 55.8
Gorai.013G134300 Gossypium raimondii HOM05D006671 ORTHO05D008637 8.3e-163 577.8 540 55.9
MD09G1171100 Malus domestica HOM05D006671 ORTHO05D008637 5.4e-162 575.1 536 57.3
Actinidia24409 Actinidia chinensis HOM05D006671 ORTHO05D008637 1.6e-161 573.5 494 60.5
Duzib160G0342 Durio zibethinus HOM05D006671 ORTHO05D008637 3.5e-161 572.4 537 55.5
Thecc.06G048900 Theobroma cacao HOM05D006671 ORTHO05D008637 4.6e-161 572.0 537 55.7
Glyma.16G015100 Glycine max HOM05D006671 ORTHO05D008637 6.0e-161 571.6 544 55.9
Phvul.010G121800 Phaseolus vulgaris HOM05D006671 ORTHO05D008637 7.8e-161 571.2 541 55.5
Prupe.3G029600 Prunus persica HOM05D006671 ORTHO05D008637 1.3e-160 570.5 531 56.3
Psat4g165440 Pisum sativum HOM05D006671 ORTHO05D008637 2.3e-160 569.7 542 55.9
Potri.001G161100 Populus trichocarpa HOM05D006671 ORTHO05D008637 2.3e-160 569.7 532 56.2
Glyma.07G047100 Glycine max HOM05D006671 ORTHO05D008637 3.9e-160 568.9 543 55.4
Manes.11G010600 Manihot esculenta HOM05D006671 ORTHO05D008637 1.1e-159 567.4 538 54.8
RcHm_v2.0_Chr2g0148251 Rosa chinensis HOM05D006671 ORTHO05D008637 1.5e-159 567.0 534 55.8
Lalb_Chr10g0101031 Lupinus albus HOM05D006671 ORTHO05D008637 2.8e-158 562.8 537 55.3
HanXRQChr10g0311581 Helianthus annuus HOM05D006671 ORTHO05D008637 6.2e-158 561.6 541 54.9
ECA234G0268 Erigeron canadensis HOM05D006671 ORTHO05D008637 1.4e-157 560.5 537 53.6
Ciclev10025368m.g Citrus clementina HOM05D006671 ORTHO05D008637 2.4e-157 559.7 529 56.1
DCAR_007665 Daucus carota HOM05D006671 ORTHO05D008637 2.4e-157 559.7 564 52.1
Atru.chr1.4182 Acer truncatum HOM05D006671 ORTHO05D008637 2.2e-155 553.1 535 56.1
Lj3g0013980 Lotus japonicus HOM05D006671 ORTHO05D008637 2.2e-155 553.1 551 53.5
CANSAT56G3116 Cannabis sativa HOM05D006671 ORTHO05D008637 2.9e-155 552.7 539 55.3
Medtr8g023620 Medicago truncatula HOM05D006671 ORTHO05D008637 3.8e-155 552.4 540 54.6
Eucgr.I02172 Eucalyptus grandis HOM05D006671 ORTHO05D008637 2.7e-153 546.2 535 54.4
Aqoxy2G04033 Aquilegia oxysepala HOM05D006671 ORTHO05D008637 2.3e-152 543.1 538 52.4
PSO017G0187 Papaver somniferum HOM05D006671 ORTHO05D008637 3.0e-152 542.7 542 53.9
Sp1g40250 Schrenkiella parvula HOM05D006671 ORTHO05D008637 8.7e-152 541.2 532 52.8
Lj5C27T5 Lonicera japonica HOM05D006671 ORTHO05D008637 1.1e-151 540.8 498 56.0
A08p01430 Brassica napus HOM05D006671 ORTHO05D008637 9.6e-151 537.7 529 52.4
Aa31LG10G1550 Aethionema arabicum HOM05D006671 ORTHO05D008637 2.1e-150 536.6 533 53.3
BraA08t32194Z Brassica rapa HOM05D006671 ORTHO05D008637 2.8e-150 536.2 529 52.0
BcaC01g01410 Brassica carinata HOM05D006671 ORTHO05D008637 4.8e-150 535.4 525 52.2
FvH4_6g36250 Fragaria vesca HOM05D006671 ORTHO05D008637 1.4e-149 533.9 528 53.6
C03p91740 Brassica napus HOM05D006671 ORTHO05D008637 1.8e-149 533.5 525 52.0
FAN14G1234 Fragaria x ananassa HOM05D006671 ORTHO05D008637 2.4e-149 533.1 528 53.6
Thhalv10011378m.g Eutrema salsugineum HOM05D006671 ORTHO05D008637 3.1e-149 532.7 533 51.0
TWI59G0357 Tripterygium wilfordii HOM05D006671 ORTHO05D008637 3.1e-149 532.7 536 54.7
BolC3t21495H Brassica oleracea HOM05D006671 ORTHO05D008637 6.9e-149 531.6 528 51.7
Haze_14039 Corylus avellana HOM05D006671 ORTHO05D008637 2.6e-148 529.6 633 47.7
arahy.Tifrunner.gnm1.ann1.NMV212 Arachis hypogaea HOM05D006671 ORTHO05D008637 1.3e-147 527.3 541 50.8
BcaB04g17063 Brassica carinata HOM05D006671 ORTHO05D008637 2.2e-147 526.6 529 51.2
arahy.Tifrunner.gnm1.ann1.YS0GDU Arachis hypogaea HOM05D006671 ORTHO05D008637 3.8e-147 525.8 541 50.6
PGR119G0898 Punica granatum HOM05D006671 ORTHO05D008637 1.9e-146 523.5 537 52.1
Carub.0001s4299 Capsella rubella HOM05D006671 ORTHO05D008637 2.4e-146 523.1 533 50.7
Lsat_1_v5_gn_5_137600 Lactuca sativa HOM05D006671 ORTHO05D008637 3.5e-145 519.2 529 53.3
AL1G62410 Arabidopsis lyrata HOM05D006671 ORTHO05D008637 7.9e-145 518.1 536 50.2
AT1G53710 Arabidopsis thaliana HOM05D006671 ORTHO05D008637 7.9e-145 518.1 533 50.8
CARHR044010 Cardamine hirsuta HOM05D006671 ORTHO05D008637 7.9e-145 518.1 532 50.6
Nitab4.5_0000357g0220 Nicotiana tabacum HOM05D006671 ORTHO05D008637 1.3e-144 517.3 522 55.7
EL10Ac7g18235 Beta vulgaris HOM05D006671 ORTHO05D008637 3.9e-144 515.8 534 51.5
HPP92_002242 Vanilla planifolia HOM05D006671 ORTHO05D008637 1.5e-143 513.8 534 53.2
FAN09G2187 Fragaria x ananassa HOM05D006671 ORTHO05D008637 2.5e-143 513.1 528 52.3
Sabra01G0131200 Salix brachista HOM05D006671 ORTHO05D008637 1.4e-141 507.3 570 49.5
MBI13_g05970_MAGBIO Magnolia biondii HOM05D006671 ORTHO05D008637 4.0e-141 505.8 479 55.1
GSVIVG01026409001 Vitis vinifera HOM05D006671 ORTHO05D008637 3.4e-140 502.7 761 40.9
Dinv20369 Davidia involucrata HOM05D006671 ORTHO05D008637 6.4e-139 498.4 370 66.5
Nitab4.5_0003469g0010 Nicotiana tabacum HOM05D006671 ORTHO05D008637 2.4e-138 496.5 537 53.3
Cpa.g.sc229.10 Carica papaya HOM05D006671 ORTHO05D008637 1.2e-137 494.2 523 52.4
Os03g0397300 Oryza sativa ssp. japonica HOM05D006671 ORTHO05D008637 6.0e-137 491.9 536 48.9
FAN14G2634 Fragaria x ananassa HOM05D006671 ORTHO05D008637 2.1e-134 483.4 528 51.1
Zm00001eb392730 Zea mays HOM05D006671 ORTHO05D008637 1.4e-133 480.7 533 48.2
AUR62001377 Chenopodium quinoa HOM05D006671 ORTHO05D008637 9.0e-133 478.0 488 52.5
Ah.08g217540 Amaranthus hybridus HOM05D006671 ORTHO05D008637 8.4e-131 471.5 531 49.9
PSO170G0973 Papaver somniferum HOM05D006671 ORTHO05D008637 7.9e-129 464.9 480 51.7
AUR62044064 Chenopodium quinoa HOM05D006671 ORTHO05D008637 2.3e-128 463.4 474 52.3
CDE06G0010 Ceratophyllum demersum HOM05D006671 ORTHO05D008637 1.9e-127 460.3 485 49.5
Actinidia33812 Actinidia chinensis HOM05D006671 ORTHO05D008637 7.4e-127 458.4 532 49.4
Peaxi162Scf00177g00616 Petunia axillaris HOM05D006671 ORTHO05D008637 6.1e-121 438.7 537 49.2
SEGI_35568 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 8.5e-115 418.3 440 51.4
Pp3c21_8010 Physcomitrium patens HOM05D006671 ORTHO05D008637 5.7e-103 379.0 538 42.0
SMO347G0345 Selaginella moellendorffii HOM05D006671 ORTHO05D008637 4.8e-102 375.9 534 41.4
AagrBONN_evm.TU.Sc2ySwM_362.1979 Anthoceros agrestis HOM05D006671 ORTHO05D008637 2.9e-99 366.7 534 41.6
VMungo0331G0057 Vigna mungo HOM05D006671 ORTHO05D008637 2.8e-94 350.1 293 59.4
Oeu006761.2 Olea europaea HOM05D006671 ORTHO05D008637 8.2e-94 348.6 285 67.0
Ca_23471_v3 Cicer arietinum L. HOM05D006671 ORTHO05D008637 2.2e-91 340.5 472 44.1
Hma1.2p1_1104F.1_g257490 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 1.2e-89 334.7 259 62.5
THA.LOC104822767 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 2.8e-86 323.6 350 49.7
QL03p047059 Quercus lobata HOM05D006671 ORTHO05D008637 1.6e-84 317.8 258 61.6
Hma1.2p1_1104F.1_g257500 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 6.3e-78 295.8 271 59.8
Mapoly0048s0109 Marchantia polymorpha HOM05D006671 ORTHO05D008637 4.1e-77 293.1 534 34.8
QL03p047068 Quercus lobata HOM05D006671 ORTHO05D008637 9.8e-71 271.9 279 53.0
Gohir.A13G116750 Gossypium hirsutum HOM05D006671 ORTHO05D008637 2.2e-70 270.8 201 62.2
FAN02G1271 Fragaria x ananassa HOM05D006671 ORTHO05D008637 4.1e-61 240.0 311 43.4
ATR0006G018 Amborella trichopoda HOM05D006671 ORTHO05D008637 1.7e-59 234.6 268 48.5
Gohir.A13G116801 Gossypium hirsutum HOM05D006671 ORTHO05D008637 3.0e-59 233.8 250 53.2
BcaNung02916 Brassica carinata HOM05D006671 ORTHO05D008637 7.3e-58 229.2 478 33.7
SEGI_04788 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 3.6e-57 226.9 274 48.2
THA.LOC104803433 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 1.7e-54 218.0 183 58.5
MD17G1156100 Malus domestica HOM05D006671 ORTHO05D008637 3.5e-52 210.3 424 36.8
Actinidia21851 Actinidia chinensis HOM05D006671 ORTHO05D008637 9.6e-42 175.6 202 49.5
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 3.4e-39 167.2 306 35.9
Hund05690 Selenicereus undatus HOM05D006671 ORTHO05D008637 2.2e-38 164.5 124 66.1
Actinidia21852 Actinidia chinensis HOM05D006671 ORTHO05D008637 5.4e-37 159.8 126 61.1
MCO09G741 Micromonas commoda HOM05D006671 ORTHO05D008637 5.4e-37 159.8 426 31.5
Cfa022026 Carpinus fangiana HOM05D002393 ORTHO05D123579 3.5e-20 104.0 495 24.6
Lsat_1_v5_gn_2_122021 Lactuca sativa HOM05D006671 ORTHO05D008637 4.6e-20 103.6 142 45.8
FAN05G4676 Fragaria x ananassa HOM05D006671 ORTHO05D008637 1.3e-17 95.5 106 51.9
BcaC09g48416 Brassica carinata HOM05D006671 ORTHO05D027459 3.9e-11 73.9 70 51.4
C01p50010 Brassica napus HOM05D010519 ORTHO05D027459 3.9e-11 73.9 70 51.4
BolC1t04958H Brassica oleracea HOM05D010519 ORTHO05D027459 3.9e-11 73.9 70 51.4
Lsat_1_v5_gn_2_91241 Lactuca sativa HOM05D006671 ORTHO05D011576 8.7e-11 72.8 81 46.9
Lsat_1_v5_gn_1_119700 Lactuca sativa HOM05D006671 ORTHO05D011576 1.6e-09 68.6 81 44.4
CSS0027715 Camellia sinensis var. sinensis HOM05D006671 ORTHO05D008637 2.6e-07 61.2 41 61.0


User provided reference genes

Program Settings