Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02017 Striga asiatica HOM05D008072 ORTHO05D010204 2.2e-58 228.8 119 100.0
SalBow7G3462 Salvia bowleyana HOM05D008072 ORTHO05D010204 5.1e-15 84.7 123 46.3
Oeu060494.1 Olea europaea HOM05D008072 ORTHO05D010204 6.7e-15 84.3 120 45.0
CSS0040470 Camellia sinensis var. sinensis HOM05D008072 ORTHO05D010204 1.1e-14 83.6 119 42.0
Dinv37992 Davidia involucrata HOM05D008072 ORTHO05D010204 5.7e-14 81.3 119 42.9
Cc04_g02690 Coffea canephora HOM05D008072 ORTHO05D010204 2.4e-12 75.9 121 40.5
Thecc.06G097600 Theobroma cacao HOM05D008072 ORTHO05D010204 2.6e-11 72.4 121 41.3
Peaxi162Scf00038g00843 Petunia axillaris HOM05D008072 ORTHO05D010204 3.4e-11 72.0 122 41.8
PGSC0003DMG400002533 Solanum tuberosum HOM05D008072 ORTHO05D010204 7.7e-11 70.9 122 40.2
FAN14G4057 Fragaria x ananassa HOM05D008072 ORTHO05D010204 1.7e-10 69.7 120 38.3
MD17G1186400 Malus domestica HOM05D008072 ORTHO05D010204 1.7e-10 69.7 124 40.3
FAN05G4246 Fragaria x ananassa HOM05D008072 ORTHO05D010204 6.5e-10 67.8 119 36.1
FvH4_6g32180 Fragaria vesca HOM05D008072 ORTHO05D010204 8.5e-10 67.4 119 36.1
Sopen03g039710 Solanum pennellii HOM05D008072 ORTHO05D010204 1.4e-09 66.6 122 39.3
MSTRG.9481 Avicennia marina HOM05D008072 ORTHO05D010204 2.5e-09 65.9 119 37.8
Prupe.3G061100 Prunus persica HOM05D008072 ORTHO05D010204 2.5e-09 65.9 119 37.0
FAN09G3706 Fragaria x ananassa HOM05D008072 ORTHO05D010204 3.2e-09 65.5 119 35.3
Manes.04G132700 Manihot esculenta HOM05D008072 ORTHO05D010204 4.2e-09 65.1 119 37.0
Potri.001G188400 Populus trichocarpa HOM05D008072 ORTHO05D010204 4.2e-09 65.1 119 37.0
Hma1.2p1_3269F.1_g334750 Hydrangea macrophylla HOM05D008072 ORTHO05D010204 7.2e-09 64.3 120 43.3
Cpa.g.c31416 Carica papaya HOM05D008072 ORTHO05D010204 9.4e-09 63.9 119 40.3
Sabra01G0152600 Salix brachista HOM05D008072 ORTHO05D010204 9.4e-09 63.9 119 37.8
FAN02G2294 Fragaria x ananassa HOM05D008072 ORTHO05D010204 1.2e-08 63.5 119 34.5
QL05p020523 Quercus lobata HOM05D008072 ORTHO05D010204 1.2e-08 63.5 118 37.3
RcHm_v2.0_Chr2g0140071 Rosa chinensis HOM05D008072 ORTHO05D010204 1.6e-08 63.2 122 36.9
Lalb_Chr04g0262911 Lupinus albus HOM05D008072 ORTHO05D010204 2.1e-08 62.8 119 39.5
Aqoxy7G01464 Aquilegia oxysepala HOM05D008072 ORTHO05D010204 2.7e-08 62.4 123 36.6
Actinidia09003 Actinidia chinensis HOM05D008072 ORTHO05D010204 3.6e-08 62.0 117 37.6
Duzib192G0771 Durio zibethinus HOM05D008072 ORTHO05D010204 3.6e-08 62.0 122 36.1
Glyma.08G202200 Glycine max HOM05D008072 ORTHO05D010204 3.6e-08 62.0 119 38.7
Atru.chr1.3499 Acer truncatum HOM05D008072 ORTHO05D010204 7.9e-08 60.8 124 33.1
Solyc03g120880.4 Solanum lycopersicum HOM05D004877 ORTHO05D005942 7.9e-08 60.8 116 36.2
HanXRQChr16g0501221 Helianthus annuus HOM05D008072 ORTHO05D010204 1.4e-07 60.1 120 36.7
TWI18G1284 Tripterygium wilfordii HOM05D008072 ORTHO05D010204 1.4e-07 60.1 119 36.1
Lj3g0001751 Lotus japonicus HOM05D008072 ORTHO05D010204 1.8e-07 59.7 119 37.8
TAR626G1017 Trochodendron aralioides HOM05D008072 ORTHO05D010204 1.8e-07 59.7 115 34.8
Rhsim12G0202400 Rhododendron simsii HOM05D008072 ORTHO05D010204 3.0e-07 58.9 115 35.7
TPR.G35014 Trifolium pratense HOM05D008072 ORTHO05D010204 6.7e-07 57.8 119 36.1
Glyma.07G016900 Glycine max HOM05D008072 ORTHO05D010204 1.1e-06 57.0 121 38.0
VMungo0331G2041 Vigna mungo HOM05D008072 ORTHO05D010204 1.1e-06 57.0 119 38.7
Nitab4.5_0001755g0100 Nicotiana tabacum HOM05D008072 ORTHO05D010204 2.0e-06 56.2 46 58.7
Phvul.010G146400 Phaseolus vulgaris HOM05D008072 ORTHO05D010204 2.6e-06 55.8 121 37.2
ClCG09G000070 Citrullus lanatus HOM05D008072 ORTHO05D010204 3.3e-06 55.5 116 36.2
Gorai.003G063000 Gossypium raimondii HOM05D008072 ORTHO05D010204 3.3e-06 55.5 115 36.5
MELO3C024449.2 Cucumis melo HOM05D008072 ORTHO05D010204 4.4e-06 55.1 118 37.3
CsaV3_7G035400 Cucumis sativus L. HOM05D008072 ORTHO05D010204 4.4e-06 55.1 117 35.9
PGR102G0255 Punica granatum HOM05D008072 ORTHO05D010204 5.7e-06 54.7 126 34.1
Gohir.D03G059100 Gossypium hirsutum HOM05D008072 ORTHO05D010204 7.4e-06 54.3 115 35.7


User provided reference genes

Program Settings