Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02004 Striga asiatica HOM05D006672 ORTHO05D007769 1.5e-92 342.8 175 100.0
Migut.D01021 Erythranthe guttata HOM05D006672 ORTHO05D007769 2.9e-59 232.3 176 75.0
SalBow1G8254 Salvia bowleyana HOM05D000380 ORTHO05D000561 3.2e-50 202.2 168 68.5
MSTRG.22671 Avicennia marina HOM05D006672 ORTHO05D007769 1.4e-48 196.8 173 65.3
Oeu040367.1 Olea europaea HOM05D006672 ORTHO05D007769 3.0e-40 169.1 173 61.3
Cc04_g03140 Coffea canephora HOM05D006672 ORTHO05D007769 4.4e-39 165.2 177 57.1
unitig_899.g14774 Utricularia gibba HOM05D006672 ORTHO05D007769 1.7e-38 163.3 172 57.0
Nitab4.5_0001315g0240 Nicotiana tabacum HOM05D006672 ORTHO05D007769 9.5e-34 147.5 181 56.4
Nitab4.5_0008314g0010 Nicotiana tabacum HOM05D006672 ORTHO05D007769 3.4e-31 139.0 177 54.2
Rhsim12G0199700 Rhododendron simsii HOM05D006672 ORTHO05D007769 4.9e-30 135.2 151 55.6
Dinv30493 Davidia involucrata HOM05D006672 ORTHO05D007769 8.3e-30 134.4 148 58.1
FvH4_6g31600 Fragaria vesca HOM05D006672 ORTHO05D007769 5.4e-29 131.7 174 50.0
ECA234G2073 Erigeron canadensis HOM05D006672 ORTHO05D007769 1.0e-27 127.5 168 47.6
FAN09G1670 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.3e-27 127.1 172 50.0
HanXRQChr10g0313401 Helianthus annuus HOM05D006672 ORTHO05D007769 2.3e-27 126.3 170 52.9
Sopen03g039560 Solanum pennellii HOM05D006672 ORTHO05D007769 2.3e-27 126.3 176 50.6
Solyc03g120740.1 Solanum lycopersicum HOM05D006672 ORTHO05D007769 1.5e-26 123.6 174 50.0
FAN14G5379 Fragaria x ananassa HOM05D006672 ORTHO05D007769 7.3e-26 121.3 174 47.7
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 1.1e-24 117.5 177 48.0
Lsat_1_v5_gn_2_34400 Lactuca sativa HOM05D008424 ORTHO05D007769 1.1e-24 117.5 172 46.5
FAN05G5736 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.4e-24 117.1 177 46.3
Manes.04G128475 Manihot esculenta HOM05D006672 ORTHO05D007769 3.1e-24 115.9 189 44.4
Actinidia08988 Actinidia chinensis HOM05D000726 ORTHO05D007769 1.2e-23 114.0 149 54.4
Cfa009362 Carpinus fangiana HOM05D006672 ORTHO05D007769 1.2e-23 114.0 144 52.8
vmacro16964 Vaccinium macrocarpon HOM05D006672 ORTHO05D007769 2.0e-23 113.2 191 45.0
Haze_12408 Corylus avellana HOM05D006672 ORTHO05D007769 2.6e-23 112.8 148 52.0
PGSC0003DMG400040414 Solanum tuberosum HOM05D006672 ORTHO05D007769 2.6e-23 112.8 178 48.9
Hma1.2p1_2022F.1_g311340 Hydrangea macrophylla HOM05D006672 ORTHO05D007769 1.7e-22 110.2 174 47.1
CiPaw.02G149600 Carya illinoinensis HOM05D006672 ORTHO05D007769 2.2e-22 109.8 184 45.1
QL05p022164 Quercus lobata HOM05D006672 ORTHO05D007769 2.2e-22 109.8 190 45.8
RcHm_v2.0_Chr2g0138661 Rosa chinensis HOM05D006672 ORTHO05D007769 3.7e-22 109.0 169 47.9
TWI75G0771 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 3.7e-22 109.0 183 45.4
DCAR_022631 Daucus carota HOM05D006672 ORTHO05D007769 4.9e-22 108.6 154 50.0
Glyma.08G205200 Glycine max HOM05D006672 ORTHO05D007769 4.9e-22 108.6 180 45.0
Lsat_1_v5_gn_5_130661 Lactuca sativa HOM05D006672 ORTHO05D007769 1.1e-21 107.5 133 53.4
Potri.003G053500 Populus trichocarpa HOM05D006672 ORTHO05D007769 1.9e-21 106.7 188 41.5
DCAR_026329 Daucus carota HOM05D006672 ORTHO05D007769 2.4e-21 106.3 180 46.7
EL10Ac9g22019 Beta vulgaris HOM05D000202 ORTHO05D000117 3.2e-21 105.9 180 43.9
Ah.01g021520 Amaranthus hybridus HOM05D006672 ORTHO05D007769 7.1e-21 104.8 148 49.3
MBI04_g22016_MAGBIO Magnolia biondii HOM05D006672 ORTHO05D007769 7.1e-21 104.8 183 44.3
TWI12G1441 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 7.1e-21 104.8 188 42.6
TAR636G2852 Trochodendron aralioides HOM05D006672 ORTHO05D007769 9.2e-21 104.4 151 50.3
AUR62011637 Chenopodium quinoa HOM05D006672 ORTHO05D007769 1.0e-19 100.9 130 52.3
Nn8g39154 Nelumbo nucifera HOM05D006672 ORTHO05D007769 1.0e-19 100.9 186 41.4
Lsat_1_v5_gn_5_130760 Lactuca sativa HOM05D006672 ORTHO05D007769 3.0e-19 99.4 115 54.8
Phvul.010G149100 Phaseolus vulgaris HOM05D006672 ORTHO05D007769 3.9e-19 99.0 180 44.4
AL1G27320 Arabidopsis lyrata HOM05D006672 ORTHO05D007769 5.1e-19 98.6 174 44.3
PSO782G0352 Papaver somniferum HOM05D006672 ORTHO05D007769 5.1e-19 98.6 143 44.1
Ciclev10026595m.g Citrus clementina HOM05D006672 ORTHO05D007769 8.6e-19 97.8 169 42.0
CANSAT56G0062 Cannabis sativa HOM05D006672 ORTHO05D007769 1.1e-18 97.4 174 44.3
Peaxi162Scf00015g00013 Petunia axillaris HOM05D006672 ORTHO05D007769 1.9e-18 96.7 88 62.5
PSO832G0654 Papaver somniferum HOM05D006672 ORTHO05D007769 3.3e-18 95.9 143 43.4
Thecc.06G091100 Theobroma cacao HOM05D006672 ORTHO05D007769 4.3e-18 95.5 192 39.6
MD17G1192500 Malus domestica HOM05D006672 ORTHO05D007769 7.3e-18 94.7 139 51.8
Prupe.3G068600 Prunus persica HOM05D006672 ORTHO05D007769 7.3e-18 94.7 147 46.9
Sp1g13550 Schrenkiella parvula HOM05D006672 ORTHO05D007769 1.2e-17 94.0 184 42.9
VMungo0331G0342 Vigna mungo HOM05D006672 ORTHO05D007769 1.2e-17 94.0 181 40.9
Sabra03G0029900 Salix brachista HOM05D006672 ORTHO05D007769 2.8e-17 92.8 121 49.6
ClCG07G013120 Citrullus lanatus HOM05D006672 ORTHO05D007769 3.6e-17 92.4 175 44.0
THA.LOC104800426 Tarenaya hassleriana HOM05D006672 ORTHO05D007769 6.2e-17 91.7 180 44.4
arahy.Tifrunner.gnm1.ann1.HW7XL7 Arachis hypogaea HOM05D006672 ORTHO05D007769 8.1e-17 91.3 123 50.4
MELO3C012968.2 Cucumis melo HOM05D006672 ORTHO05D007769 1.8e-16 90.1 174 44.8
Gorai.009G134300 Gossypium raimondii HOM05D006672 ORTHO05D007769 2.3e-16 89.7 193 39.9
Atru.chr1.3318 Acer truncatum HOM05D006672 ORTHO05D007769 3.1e-16 89.4 145 46.2
AT1G15230 Arabidopsis thaliana HOM05D006672 ORTHO05D007769 4.0e-16 89.0 173 41.0
AUR62016468 Chenopodium quinoa HOM05D006672 ORTHO05D007769 4.0e-16 89.0 128 51.6
arahy.Tifrunner.gnm1.ann1.MVJ1PZ Arachis hypogaea HOM05D006672 ORTHO05D007769 5.2e-16 88.6 178 42.7
BraA06t24303Z Brassica rapa HOM05D006672 ORTHO05D007769 5.2e-16 88.6 174 43.7
COL.COLO4_30405 Corchorus olitorius HOM05D006672 ORTHO05D007769 5.2e-16 88.6 190 41.6
Gohir.A05G131200 Gossypium hirsutum HOM05D006672 ORTHO05D007769 5.2e-16 88.6 194 39.2
Gohir.D05G130600 Gossypium hirsutum HOM05D006672 ORTHO05D007769 8.9e-16 87.8 193 39.4
Lj3g0012066 Lotus japonicus HOM05D006672 ORTHO05D007769 8.9e-16 87.8 174 41.4
arahy.Tifrunner.gnm1.ann1.ZTP7X5 Arachis hypogaea HOM05D006672 ORTHO05D007769 2.6e-15 86.3 123 47.2
arahy.Tifrunner.gnm1.ann1.07RGV5 Arachis hypogaea HOM05D006672 ORTHO05D007769 5.8e-15 85.1 181 41.4
Carub.0001s1499 Capsella rubella HOM05D006672 ORTHO05D007769 5.8e-15 85.1 176 40.9
A06p11230 Brassica napus HOM05D006672 ORTHO05D007769 1.3e-14 84.0 174 41.4
Lalb_Chr25g0279941 Lupinus albus HOM05D006672 ORTHO05D007769 1.3e-14 84.0 134 44.8
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 1.7e-14 83.6 145 42.8
Aqoxy7G01641 Aquilegia oxysepala HOM05D006672 ORTHO05D007769 2.2e-14 83.2 179 40.8
Thhalv10008936m.g Eutrema salsugineum HOM05D006672 ORTHO05D007769 3.7e-14 82.4 148 43.2
PGR102G2442 Punica granatum HOM05D006672 ORTHO05D007769 4.9e-14 82.0 159 42.1
arahy.Tifrunner.gnm1.ann1.N61AC9 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.4e-13 80.5 129 47.3
arahy.Tifrunner.gnm1.ann1.HQ5KA8 Arachis hypogaea HOM05D006672 ORTHO05D007769 3.2e-13 79.3 97 49.5
SGA_v2.0_scaffold5G02564 Striga asiatica HOM05D000085 ORTHO05D000274 7.1e-13 78.2 136 44.9
Duzib160G0370 Durio zibethinus HOM05D000726 ORTHO05D007769 9.2e-13 77.8 158 41.8
arahy.Tifrunner.gnm1.ann1.C7681Z Arachis hypogaea HOM05D006672 ORTHO05D007769 1.2e-12 77.4 130 46.9
Mapoly0141s0006 Marchantia polymorpha HOM05D006672 ORTHO05D007769 1.2e-12 77.4 141 41.1
BolC5t30073H Brassica oleracea HOM05D006672 ORTHO05D007769 1.6e-12 77.0 174 39.7
TPR.G17666 Trifolium pratense HOM05D006672 ORTHO05D007769 1.6e-12 77.0 175 41.1
arahy.Tifrunner.gnm1.ann1.QF27IC Arachis hypogaea HOM05D006672 ORTHO05D007769 2.1e-12 76.6 130 45.4
BcaC05g25452 Brassica carinata HOM05D006672 ORTHO05D007769 2.1e-12 76.6 174 40.8
C05p13360 Brassica napus HOM05D006672 ORTHO05D007769 2.1e-12 76.6 174 40.8
CsaV3_3G025030 Cucumis sativus L. HOM05D006672 ORTHO05D007769 2.1e-12 76.6 150 40.7
BcaC05g25464 Brassica carinata HOM05D006672 ORTHO05D007769 6.0e-12 75.1 184 39.1
Duzib235G0275 Durio zibethinus HOM05D006672 ORTHO05D007769 7.8e-12 74.7 87 50.6
Sed0005168 Sechium edule HOM05D006672 ORTHO05D007769 1.0e-11 74.3 169 39.6
CSS0000508 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 1.7e-11 73.6 159 41.5
CARHR015760 Cardamine hirsuta HOM05D006672 ORTHO05D007769 3.0e-11 72.8 172 38.4
Ca_20375_v3 Cicer arietinum L. HOM05D006672 ORTHO05D007769 3.9e-11 72.4 93 51.6
SEGI_22972 Sequoiadendron giganteum HOM05D006672 ORTHO05D007769 8.6e-11 71.2 155 39.4
arahy.Tifrunner.gnm1.ann1.K72DJ3 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.1e-10 70.9 92 51.1
Medtr0206s0010 Medicago truncatula HOM05D006672 ORTHO05D007769 1.1e-10 70.9 87 50.6
CSS0037944 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 1.5e-10 70.5 162 38.9
Medtr4g012950 Medicago truncatula HOM05D006672 ORTHO05D007769 5.6e-10 68.6 87 48.3
BcaC05g25462 Brassica carinata HOM05D006672 ORTHO05D007769 2.1e-09 66.6 174 36.2
SMO364G0119 Selaginella moellendorffii HOM05D006672 ORTHO05D007769 1.4e-08 63.9 134 39.6
arahy.Tifrunner.gnm1.ann1.XTGM9Z Arachis hypogaea HOM05D006672 ORTHO05D007769 1.8e-08 63.5 128 40.6
ATR0829G196 Amborella trichopoda HOM05D006672 ORTHO05D007769 2.4e-08 63.2 145 39.3
AagrBONN_evm.TU.Sc2ySwM_362.2137 Anthoceros agrestis HOM05D006672 ORTHO05D007769 3.1e-08 62.8 138 41.3
Psat7g250280 Pisum sativum HOM05D006672 ORTHO05D007769 3.1e-08 62.8 139 41.0
Lsat_1_v5_gn_5_130640 Lactuca sativa HOM05D006672 ORTHO05D007769 4.0e-08 62.4 51 66.7
Pp3c1_40010 Physcomitrium patens HOM05D006672 ORTHO05D007769 8.9e-08 61.2 131 39.7
Zm00001eb098380 Zea mays HOM05D006672 ORTHO05D007769 8.9e-08 61.2 77 51.9
Aa31LG7G40 Aethionema arabicum HOM05D006672 ORTHO05D007769 1.5e-07 60.5 131 40.5
HPP92_005483 Vanilla planifolia HOM05D006672 ORTHO05D007769 1.3e-06 57.4 159 38.4
Lsat_1_v5_gn_4_162060 Lactuca sativa HOM05D006672 ORTHO05D007769 1.7e-06 57.0 44 65.9
Rhsim06G0080600 Rhododendron simsii HOM05D006672 ORTHO05D007769 2.2e-06 56.6 68 48.5
arahy.Tifrunner.gnm1.ann1.DAY3RM Arachis hypogaea HOM05D006672 ORTHO05D007769 4.9e-06 55.5 141 39.7
SalBow6G4027 Salvia bowleyana HOM05D028312 ORTHO05D355097 4.9e-06 55.5 66 53.0


User provided reference genes

Program Settings