Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 9.2e-223 776.5 386 100.0
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 1.1e-156 557.0 369 75.9
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 6.3e-155 551.2 369 75.3
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 9.1e-154 547.4 369 75.1
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 4.2e-143 511.9 368 70.9
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 9.4e-143 510.8 368 70.1
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 1.2e-140 503.8 370 67.8
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 1.5e-140 503.4 369 69.1
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 5.7e-140 501.5 368 69.6
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 7.5e-140 501.1 368 68.8
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 7.5e-140 501.1 372 70.2
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 7.5e-140 501.1 370 67.6
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 2.2e-139 499.6 369 69.1
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 8.2e-139 497.7 368 68.5
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 1.8e-138 496.5 369 69.4
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 1.8e-138 496.5 369 69.9
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 3.1e-138 495.7 362 69.6
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 7.0e-138 494.6 369 69.4
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 2.0e-137 493.0 369 67.8
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 2.0e-137 493.0 369 70.2
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 4.5e-137 491.9 368 67.9
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 7.7e-137 491.1 370 68.6
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 1.7e-136 490.0 370 67.8
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 2.2e-136 489.6 368 67.9
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 5.0e-136 488.4 369 68.6
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 5.0e-136 488.4 368 66.8
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 8.5e-136 487.6 363 68.0
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 1.5e-135 486.9 374 66.8
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 4.2e-135 485.3 378 66.1
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 2.1e-134 483.0 370 65.4
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 2.7e-134 482.6 369 66.1
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 6.1e-134 481.5 372 65.3
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 6.1e-134 481.5 374 64.7
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 8.0e-134 481.1 371 67.9
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 1.0e-133 480.7 372 65.3
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 1.4e-133 480.3 371 66.6
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 1.8e-133 479.9 368 66.6
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 1.8e-133 479.9 369 65.9
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 2.3e-133 479.6 374 64.7
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 3.0e-133 479.2 368 68.5
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 3.0e-133 479.2 370 64.9
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 3.0e-133 479.2 369 65.3
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 4.0e-133 478.8 356 66.9
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 5.2e-133 478.4 373 64.1
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 8.8e-133 477.6 376 64.4
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 8.8e-133 477.6 376 64.4
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 2.0e-132 476.5 368 67.7
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 3.4e-132 475.7 368 67.1
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 5.7e-132 474.9 378 65.1
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 7.5e-132 474.6 373 63.8
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 6.3e-131 471.5 375 66.9
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 6.3e-131 471.5 372 65.1
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 6.3e-131 471.5 399 62.4
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 1.1e-130 470.7 373 63.8
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 1.1e-130 470.7 369 64.5
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 1.4e-130 470.3 368 64.7
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 7.0e-130 468.0 368 66.3
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 7.0e-130 468.0 372 63.7
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 9.1e-130 467.6 368 66.3
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 9.1e-130 467.6 368 65.8
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 9.1e-130 467.6 370 64.1
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 1.2e-129 467.2 368 66.3
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 3.5e-129 465.7 373 63.0
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 1.7e-128 463.4 368 65.2
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 1.7e-128 463.4 368 65.5
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 2.9e-128 462.6 370 65.1
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 1.5e-127 460.3 368 64.1
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 1.5e-127 460.3 369 63.1
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 2.5e-127 459.5 369 63.1
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 3.2e-127 459.1 369 62.3
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 4.2e-127 458.8 345 69.0
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 4.2e-127 458.8 344 69.2
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 1.2e-126 457.2 380 63.7
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 2.8e-126 456.1 370 63.5
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 2.8e-126 456.1 370 63.2
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 2.8e-126 456.1 369 63.7
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 4.7e-126 455.3 373 63.0
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 6.1e-126 454.9 369 62.1
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 1.8e-125 453.4 368 64.7
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 3.0e-125 452.6 379 58.3
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 1.2e-124 450.7 370 61.6
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 1.7e-123 446.8 449 54.6
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 2.2e-123 446.4 370 61.4
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 6.3e-123 444.9 373 58.4
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 8.3e-123 444.5 419 56.8
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 4.1e-122 442.2 371 61.5
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 4.1e-122 442.2 367 60.2
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 4.1e-122 442.2 370 62.4
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 1.2e-121 440.7 369 62.9
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 4.5e-121 438.7 346 65.9
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 3.3e-119 432.6 344 65.1
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 4.3e-119 432.2 338 66.6
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 7.3e-119 431.4 369 60.7
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 9.5e-119 431.0 372 58.6
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 1.2e-118 430.6 370 60.5
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 7.5e-116 421.4 367 58.3
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 1.7e-115 420.2 324 66.4
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 2.4e-114 416.4 350 61.1
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 6.0e-113 411.8 284 71.5
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 6.6e-112 408.3 331 62.8
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 8.6e-112 407.9 287 70.7
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 1.9e-111 406.8 288 71.5
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 7.5e-108 394.8 277 72.6
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 6.4e-107 391.7 323 62.5
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 6.0e-105 385.2 276 71.4
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 1.4e-101 374.0 373 52.5
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 1.1e-98 364.4 304 64.5
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 1.4e-98 364.0 372 52.4
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 2.5e-95 353.2 338 56.5
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 9.5e-95 351.3 363 50.7
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 1.4e-90 337.4 269 62.1
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 2.4e-90 336.7 273 63.4
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 2.4e-90 336.7 264 63.6
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 4.9e-83 312.4 368 45.9
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 2.9e-75 286.6 324 45.7
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 3.7e-70 269.6 459 36.4
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 1.3e-59 234.6 368 41.3
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 4.2e-58 229.6 357 38.4
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 8.2e-54 215.3 177 66.1
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 2.6e-52 210.3 271 44.3
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 6.5e-51 205.7 249 51.4
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.7e-46 191.0 243 50.2
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 1.1e-45 188.3 212 55.2
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 1.0e-43 181.8 183 60.1
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 6.5e-43 179.1 183 59.0
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 1.7e-38 164.5 265 45.3
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 3.6e-25 120.2 119 51.3
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 9.1e-21 105.5 205 37.6
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 1.4e-16 91.7 106 50.9
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 6.8e-16 89.4 63 68.3
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 4.8e-14 83.2 49 79.6
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 4.8e-14 83.2 66 59.1
Ca_29425_v3 Cicer arietinum L. HOM05D005739 ORTHO05D044167 1.1e-10 72.0 221 28.1
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 4.7e-09 66.6 35 85.7
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 2.2e-06 57.8 83 39.8


User provided reference genes

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