Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G01914 Striga asiatica HOM05D011575 ORTHO05D004912 1.0e-51 206.5 105 100.0
SGA_v2.0_scaffold7G03838 Striga asiatica HOM05D011575 ORTHO05D004912 1.4e-40 169.5 108 81.5
MSTRG.7209 Avicennia marina HOM05D011575 ORTHO05D004912 7.9e-36 153.7 106 74.5
Migut.M01320 Erythranthe guttata HOM05D011575 ORTHO05D004912 6.3e-33 144.1 108 72.2
Migut.H01572 Erythranthe guttata HOM05D011575 ORTHO05D004912 2.4e-32 142.1 110 67.3
SalBow8G3401 Salvia bowleyana HOM05D011575 ORTHO05D004912 1.3e-30 136.3 108 66.7
Oeu002741.1 Olea europaea HOM05D011575 ORTHO05D004912 3.8e-22 108.2 110 55.5
PGSC0003DMG400016452 Solanum tuberosum HOM05D011575 ORTHO05D004912 2.3e-19 99.0 104 55.8
Sopen02g025250 Solanum pennellii HOM05D011575 ORTHO05D004912 2.0e-18 95.9 104 52.9
unitig_744.g24521 Utricularia gibba HOM05D011575 ORTHO05D004912 6.3e-17 90.9 101 50.5
Solyc02g080550.1 Solanum lycopersicum HOM05D011575 ORTHO05D004912 3.1e-16 88.6 92 53.3
unitig_0.g942 Utricularia gibba HOM05D011575 ORTHO05D004912 7.0e-16 87.4 102 51.0
PGSC0003DMG400016451 Solanum tuberosum HOM05D011575 ORTHO05D004912 7.7e-15 84.0 106 47.2
Sopen02g025260 Solanum pennellii HOM05D011575 ORTHO05D004912 1.9e-13 79.3 106 45.3
Solyc02g080560.1 Solanum lycopersicum HOM05D011575 ORTHO05D004912 2.5e-13 79.0 107 47.7
QL05p073115 Quercus lobata HOM05D007398 ORTHO05D004912 6.1e-12 74.3 109 41.3
QL05p073125 Quercus lobata HOM05D007398 ORTHO05D004912 5.2e-11 71.2 106 45.3
Medtr8g468960 Medicago truncatula HOM05D011727 ORTHO05D004912 9.8e-10 67.0 93 44.1
Haze_06802 Corylus avellana HOM05D061810 ORTHO05D004912 6.3e-09 64.3 89 44.9
FAN25G2989 Fragaria x ananassa HOM05D011727 ORTHO05D004912 1.8e-08 62.8 107 41.1
Glyma.14G163600 Glycine max HOM05D011727 ORTHO05D004912 1.8e-08 62.8 101 44.6
Nn1g03511 Nelumbo nucifera HOM05D007398 ORTHO05D004912 1.8e-08 62.8 105 39.0
FAN02G4350 Fragaria x ananassa HOM05D007398 ORTHO05D004912 2.4e-08 62.4 96 42.7
Duzib251G0280 Durio zibethinus HOM05D007398 ORTHO05D004912 3.1e-08 62.0 108 45.4
Glyma.13G082350 Glycine max HOM05D011727 ORTHO05D004912 5.4e-08 61.2 112 38.4
CSS0017183 Camellia sinensis var. sinensis HOM05D007398 ORTHO05D004912 9.2e-08 60.5 84 41.7
Thecc.02G314700 Theobroma cacao HOM05D007398 ORTHO05D004912 9.2e-08 60.5 109 45.0
VMungo0647G2151 Vigna mungo HOM05D011727 ORTHO05D004912 9.2e-08 60.5 98 41.8
FAN14G0586 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.2e-07 60.1 96 42.7
Glyma.13G082600 Glycine max HOM05D011727 ORTHO05D004912 1.2e-07 60.1 99 41.4
TAR627G0987 Trochodendron aralioides HOM05D007398 ORTHO05D004912 1.2e-07 60.1 106 41.5
FAN05G1963 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.6e-07 59.7 96 41.7
Hma1.2p1_0328F.1_g126925 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 1.6e-07 59.7 87 41.4
Hma1.2p1_0328F.1_g126930 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 1.6e-07 59.7 87 41.4
Ciclev10017196m.g Citrus clementina HOM05D007398 ORTHO05D004912 2.0e-07 59.3 94 43.6
Gorai.008G173500 Gossypium raimondii HOM05D007398 ORTHO05D004912 2.7e-07 58.9 99 43.4
RcHm_v2.0_Chr2g0159281 Rosa chinensis HOM05D007398 ORTHO05D004912 2.7e-07 58.9 96 43.8
Atru.chr6.3184 Acer truncatum HOM05D007398 ORTHO05D004912 3.5e-07 58.5 112 41.1
FvH4_3g02050 Fragaria vesca HOM05D011727 ORTHO05D004912 3.5e-07 58.5 107 40.2
FAN21G2105 Fragaria x ananassa HOM05D011727 ORTHO05D004912 3.5e-07 58.5 107 40.2
Lj1g0009560 Lotus japonicus HOM05D011727 ORTHO05D004912 3.5e-07 58.5 96 42.7
FAN09G1954 Fragaria x ananassa HOM05D007398 ORTHO05D004912 4.5e-07 58.2 91 42.9
FAN10G4171 Fragaria x ananassa HOM05D007398 ORTHO05D004912 4.5e-07 58.2 96 41.7
MD09G1108900 Malus domestica HOM05D007398 ORTHO05D004912 4.5e-07 58.2 96 41.7
TAR626G0532 Trochodendron aralioides HOM05D007398 ORTHO05D004912 4.5e-07 58.2 107 41.1
Actinidia30523 Actinidia chinensis HOM05D007398 ORTHO05D004912 5.9e-07 57.8 92 42.4
Ca_22861_v3 Cicer arietinum L. HOM05D011727 ORTHO05D004912 7.7e-07 57.4 94 43.6
FvH4_6g43180 Fragaria vesca HOM05D007398 ORTHO05D004912 7.7e-07 57.4 96 40.6
Manes.13G070200 Manihot esculenta HOM05D007398 ORTHO05D004912 1.0e-06 57.0 79 46.8
Phvul.008G166200 Phaseolus vulgaris HOM05D011727 ORTHO05D004912 1.0e-06 57.0 96 39.6
Atru.chr6.3183 Acer truncatum HOM05D007398 ORTHO05D004912 1.3e-06 56.6 113 41.6
Dinv39711 Davidia involucrata HOM05D007398 ORTHO05D004912 1.3e-06 56.6 95 38.9
Duzib248G0799 Durio zibethinus HOM05D007398 ORTHO05D004912 1.3e-06 56.6 111 44.1
CANSAT64G0797 Cannabis sativa HOM05D007398 ORTHO05D004912 1.7e-06 56.2 99 43.4
DCAR_024934 Daucus carota HOM05D011575 ORTHO05D004912 1.7e-06 56.2 107 39.3
Gohir.D04G189100 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.7e-06 56.2 107 41.1
QL08p033081 Quercus lobata HOM05D007398 ORTHO05D004912 1.7e-06 56.2 107 36.4
Gohir.A12G157600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 2.3e-06 55.8 99 42.4
Actinidia03605 Actinidia chinensis HOM05D007398 ORTHO05D004912 2.9e-06 55.5 89 41.6
AUR62012711 Chenopodium quinoa HOM05D011727 ORTHO05D004912 2.9e-06 55.5 100 37.0
COL.COLO4_27711 Corchorus olitorius HOM05D007398 ORTHO05D004912 2.9e-06 55.5 100 41.0
Aqoxy1G02145 Aquilegia oxysepala HOM05D007398 ORTHO05D004912 3.8e-06 55.1 85 42.4
QL07p015665 Quercus lobata HOM05D007398 ORTHO05D004912 3.8e-06 55.1 104 38.5
Ca_01601_v3 Cicer arietinum L. HOM05D007398 ORTHO05D004912 5.0e-06 54.7 94 40.4
Haze_12865 Corylus avellana HOM05D007398 ORTHO05D004912 5.0e-06 54.7 98 35.7
Gorai.012G184400 Gossypium raimondii HOM05D007398 ORTHO05D004912 5.0e-06 54.7 107 41.1
Cfa014400 Carpinus fangiana HOM05D007398 ORTHO05D004912 6.6e-06 54.3 97 39.2
Medtr8g468940 Medicago truncatula HOM05D011727 ORTHO05D004912 6.6e-06 54.3 94 41.5


User provided reference genes

Program Settings