Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G01894 Striga asiatica HOM05D004496 ORTHO05D005513 2.2e-137 492.7 327 100.0
MSTRG.7183 Avicennia marina HOM05D004496 ORTHO05D005513 2.6e-45 186.8 351 44.4
MSTRG.13128 Avicennia marina HOM05D004496 ORTHO05D005513 9.4e-43 178.3 358 39.1
SalBow8G1688 Salvia bowleyana HOM05D004496 ORTHO05D005513 2.7e-34 150.2 334 37.7
Migut.M01368 Erythranthe guttata HOM05D004496 ORTHO05D005513 7.4e-32 142.1 343 37.6
Nitab4.5_0005882g0010 Nicotiana tabacum HOM05D004496 ORTHO05D005513 2.5e-27 127.1 340 35.6
Lj2P264T22 Lonicera japonica HOM05D004496 ORTHO05D005513 3.2e-27 126.7 353 33.7
Dinv20109 Davidia involucrata HOM05D004496 ORTHO05D005950 3.0e-25 120.2 340 33.8
Nn1g03388 Nelumbo nucifera HOM05D004496 ORTHO05D005513 5.2e-25 119.4 343 31.8
Nn1g07279 Nelumbo nucifera HOM05D004496 ORTHO05D005513 8.8e-25 118.6 354 36.7
Psat1g175480 Pisum sativum HOM05D004496 ORTHO05D005513 5.7e-24 115.9 319 34.8
Migut.H01591 Erythranthe guttata HOM05D004496 ORTHO05D005513 1.3e-23 114.8 340 38.2
Nitab4.5_0000005g0040 Nicotiana tabacum HOM05D004496 ORTHO05D005513 2.2e-23 114.0 340 35.0
PGSC0003DMG400016725 Solanum tuberosum HOM05D004496 ORTHO05D005513 6.3e-23 112.5 392 31.6
TAR627G0164 Trochodendron aralioides HOM05D004496 ORTHO05D005513 6.3e-23 112.5 336 35.1
TAR627G0966 Trochodendron aralioides HOM05D004496 ORTHO05D005513 8.3e-23 112.1 336 35.1
Nitab4.5_0006125g0010 Nicotiana tabacum HOM05D004496 ORTHO05D005513 1.4e-22 111.3 353 34.0
Ca_00696_v3 Cicer arietinum L. HOM05D004496 ORTHO05D005513 2.4e-22 110.5 326 34.7
Sopen02g025790 Solanum pennellii HOM05D004496 ORTHO05D005513 5.4e-22 109.4 393 31.0
CAN.G1014.49 Capsicum annuum HOM05D004496 ORTHO05D005513 7.0e-22 109.0 325 34.8
Ciclev10015792m.g Citrus clementina HOM05D004496 ORTHO05D005513 2.0e-21 107.5 338 32.0
TAR624G0763 Trochodendron aralioides HOM05D001218 ORTHO05D003142 2.0e-21 107.5 354 33.1
Solyc02g081150.1 Solanum lycopersicum HOM05D004496 ORTHO05D005513 7.7e-21 105.5 392 30.9
Hma1.2p1_0298F.1_g117440 Hydrangea macrophylla HOM05D004496 ORTHO05D005513 1.7e-20 104.4 341 35.5
ClCG01G021640 Citrullus lanatus HOM05D004496 ORTHO05D005513 2.2e-20 104.0 368 32.6
Rhsim13G0149900 Rhododendron simsii HOM05D004496 ORTHO05D005513 3.8e-20 103.2 330 32.4
Lsat_1_v5_gn_7_14880 Lactuca sativa HOM05D004496 ORTHO05D005513 6.5e-20 102.4 332 29.8
Nitab4.5_0009517g0010 Nicotiana tabacum HOM05D004496 ORTHO05D005513 6.5e-20 102.4 358 32.4
CiPaw.10G074800 Carya illinoinensis HOM05D004496 ORTHO05D005513 8.5e-20 102.1 341 35.8
Lj6g0013804 Lotus japonicus HOM05D004496 ORTHO05D005513 1.1e-19 101.7 291 33.3
Dinv13941 Davidia involucrata HOM05D004496 ORTHO05D005513 1.5e-19 101.3 328 33.2
THA.LOC104812981 Tarenaya hassleriana HOM05D004496 ORTHO05D005513 1.9e-19 100.9 361 32.4
Medtr2g024980 Medicago truncatula HOM05D004496 ORTHO05D005513 7.2e-19 99.0 339 34.5
EL10Ac8g20132 Beta vulgaris HOM05D004496 ORTHO05D005513 1.6e-18 97.8 273 37.0
CiPaw.09G098400 Carya illinoinensis HOM05D004496 ORTHO05D005513 1.6e-18 97.8 336 33.9
Carub.0007s1912 Capsella rubella HOM05D004496 ORTHO05D005513 2.1e-18 97.4 352 33.0
Sp7g20330 Schrenkiella parvula HOM05D004496 ORTHO05D005513 2.7e-18 97.1 347 32.9
SGA_v2.0_scaffold89G27486 Striga asiatica HOM05D004496 ORTHO05D005513 6.1e-18 95.9 338 41.4
HanXRQChr15g0470781 Helianthus annuus HOM05D004496 ORTHO05D005513 8.0e-18 95.5 323 36.5
THA.LOC104806318 Tarenaya hassleriana HOM05D004496 ORTHO05D005513 8.0e-18 95.5 355 29.6
Oeu003154.1 Olea europaea HOM05D004496 ORTHO05D005513 1.8e-17 94.4 335 30.4
Actinidia26886 Actinidia chinensis HOM05D004496 ORTHO05D005513 2.3e-17 94.0 324 39.8
PGR042G2934 Punica granatum HOM05D004496 ORTHO05D005513 4.0e-17 93.2 391 29.9
BcaNung03756 Brassica carinata HOM05D004496 ORTHO05D005513 1.2e-16 91.7 343 32.7
PGR004G2243 Punica granatum HOM05D004496 ORTHO05D005513 1.2e-16 91.7 335 33.1
AL7G31460 Arabidopsis lyrata HOM05D004496 ORTHO05D005513 1.5e-16 91.3 343 34.4
Duzib192G0344 Durio zibethinus HOM05D004496 ORTHO05D005513 1.5e-16 91.3 341 28.4
Duzib235G0420 Durio zibethinus HOM05D004496 ORTHO05D005513 1.5e-16 91.3 353 33.1
Gohir.D05G176300 Gossypium hirsutum HOM05D004496 ORTHO05D005513 1.5e-16 91.3 350 27.1
MD10G1327300 Malus domestica HOM05D004496 ORTHO05D005513 1.5e-16 91.3 361 31.0
Prupe.4G014700 Prunus persica HOM05D004496 ORTHO05D005513 1.5e-16 91.3 345 36.2
Actinidia02342 Actinidia chinensis HOM05D004496 ORTHO05D005513 2.0e-16 90.9 330 35.2
BcaNung01704 Brassica carinata HOM05D004496 ORTHO05D005513 2.0e-16 90.9 348 33.6
A01p13560 Brassica napus HOM05D004496 ORTHO05D005513 2.0e-16 90.9 354 33.1
Sabra11G0011700 Salix brachista HOM05D004496 ORTHO05D005513 2.0e-16 90.9 350 32.0
vmacro03662 Vaccinium macrocarpon HOM05D004496 ORTHO05D005513 2.0e-16 90.9 352 29.5
BraA01t01298Z Brassica rapa HOM05D004496 ORTHO05D005513 2.6e-16 90.5 353 33.4
Sabra11G0008600 Salix brachista HOM05D004496 ORTHO05D005513 2.6e-16 90.5 337 32.9
Sabra11G0010200 Salix brachista HOM05D004496 ORTHO05D005513 2.6e-16 90.5 337 32.9
Ah.09g234500 Amaranthus hybridus HOM05D004496 ORTHO05D005950 3.4e-16 90.1 275 37.8
BcaC09g51153 Brassica carinata HOM05D004496 ORTHO05D005513 4.4e-16 89.7 344 32.3
C01p16430 Brassica napus HOM05D004496 ORTHO05D005513 4.4e-16 89.7 344 32.3
BolC1t01593H Brassica oleracea HOM05D004496 ORTHO05D005513 4.4e-16 89.7 344 32.3
CSS0046352 Camellia sinensis var. sinensis HOM05D004496 ORTHO05D005513 5.7e-16 89.4 341 29.9
Cpa.g.sc3209.1 Carica papaya HOM05D004496 ORTHO05D005513 5.7e-16 89.4 352 35.2
Thhalv10025698m.g Eutrema salsugineum HOM05D004496 ORTHO05D005513 5.7e-16 89.4 345 33.6
Lalb_Chr18g0056781 Lupinus albus HOM05D004496 ORTHO05D005513 5.7e-16 89.4 325 31.7
C07p51660 Brassica napus HOM05D004496 ORTHO05D005513 7.5e-16 89.0 344 33.4
DCAR_002205 Daucus carota HOM05D004496 ORTHO05D005513 7.5e-16 89.0 353 37.4
Lalb_Chr15g0087811 Lupinus albus HOM05D004496 ORTHO05D005513 9.8e-16 88.6 317 33.1
Glyma.15G112200 Glycine max HOM05D004496 ORTHO05D005513 1.3e-15 88.2 323 31.9
unitig_749.g13622 Utricularia gibba HOM05D004496 ORTHO05D005513 1.3e-15 88.2 293 42.7
Aa31LG6G4310 Aethionema arabicum HOM05D004496 ORTHO05D005513 1.7e-15 87.8 340 32.9
QL05p071740 Quercus lobata HOM05D004496 ORTHO05D005513 1.7e-15 87.8 333 41.7
Phvul.006G145400 Phaseolus vulgaris HOM05D004496 ORTHO05D005513 2.2e-15 87.4 305 32.1
Sed0021394 Sechium edule HOM05D004496 ORTHO05D005513 2.2e-15 87.4 333 32.1
Lj1P1236T60 Lonicera japonica HOM05D004496 ORTHO05D005513 2.8e-15 87.0 129 45.0
MD05G1352700 Malus domestica HOM05D004496 ORTHO05D005513 4.9e-15 86.3 351 33.9
Manes.16G002700 Manihot esculenta HOM05D004496 ORTHO05D005513 4.9e-15 86.3 335 30.7
Oeu007154.1 Olea europaea HOM05D004496 ORTHO05D005513 4.9e-15 86.3 278 32.0
MBI19_g19808_MAGBIO Magnolia biondii HOM05D004496 ORTHO05D005513 6.3e-15 85.9 351 41.3
BcaNung00807 Brassica carinata HOM05D004496 ORTHO05D005513 8.3e-15 85.5 346 33.5
CsaV3_6G048690 Cucumis sativus L. HOM05D004496 ORTHO05D005513 8.3e-15 85.5 367 32.4
CARHR229080 Cardamine hirsuta HOM05D004496 ORTHO05D005513 1.1e-14 85.1 347 33.4
Thecc.06G228600 Theobroma cacao HOM05D004496 ORTHO05D005513 1.1e-14 85.1 348 27.6
MELO3C007420.2 Cucumis melo HOM05D004496 ORTHO05D005513 1.4e-14 84.7 347 31.4
ECA236G1118 Erigeron canadensis HOM05D004496 ORTHO05D005513 1.8e-14 84.3 314 29.9
Cfa000158 Carpinus fangiana HOM05D004496 ORTHO05D005513 2.4e-14 84.0 339 36.6
Gohir.A05G173300 Gossypium hirsutum HOM05D004496 ORTHO05D005513 2.4e-14 84.0 328 34.1
Sc17g0007590 Simmondsia chinensis HOM05D004496 ORTHO05D005513 2.4e-14 84.0 343 30.9
unitig_26.g9398 Utricularia gibba HOM05D004496 ORTHO05D005513 2.4e-14 84.0 306 34.0
A03p53360 Brassica napus HOM05D004496 ORTHO05D005513 3.1e-14 83.6 343 29.4
Thhalv10028862m.g Eutrema salsugineum HOM05D004496 ORTHO05D005513 4.1e-14 83.2 320 29.7
Peaxi162Scf00708g00013 Petunia axillaris HOM05D004496 ORTHO05D005513 4.1e-14 83.2 326 29.8
Sed0016463 Sechium edule HOM05D004496 ORTHO05D005513 4.1e-14 83.2 273 35.9
Haze_06861 Corylus avellana HOM05D004496 ORTHO05D005513 5.4e-14 82.8 336 35.1
FAN25G1366 Fragaria x ananassa HOM05D004496 ORTHO05D005513 7.0e-14 82.4 335 27.2
THA.LOC104813445 Tarenaya hassleriana HOM05D004496 ORTHO05D005513 7.0e-14 82.4 336 33.6
TWI38G0464 Tripterygium wilfordii HOM05D004496 ORTHO05D005513 9.1e-14 82.0 333 28.2
Glyma.09G007852 Glycine max HOM05D004496 ORTHO05D005513 1.2e-13 81.6 335 30.7
COL.COLO4_31834 Corchorus olitorius HOM05D004496 ORTHO05D005513 1.6e-13 81.3 135 40.0
Peaxi162Scf00294g00097 Petunia axillaris HOM05D004496 ORTHO05D005513 2.0e-13 80.9 327 30.6
Lsat_1_v5_gn_4_61701 Lactuca sativa HOM05D004496 ORTHO05D005513 2.7e-13 80.5 358 28.5
AT4G22190 Arabidopsis thaliana HOM05D004496 ORTHO05D005513 7.7e-13 79.0 347 37.2
BcaNung03755 Brassica carinata HOM05D004496 ORTHO05D005513 1.3e-12 78.2 127 39.4
Gohir.D06G157600 Gossypium hirsutum HOM05D004496 ORTHO05D005513 5.0e-12 76.3 329 26.1
Gorai.010G184200 Gossypium raimondii HOM05D004496 ORTHO05D005513 5.0e-12 76.3 329 26.1
Potri.011G015500 Populus trichocarpa HOM05D004496 ORTHO05D005513 5.0e-12 76.3 335 31.9
CANSAT56G2524 Cannabis sativa HOM05D004496 ORTHO05D005513 8.6e-12 75.5 169 34.9
Gorai.009G181700 Gossypium raimondii HOM05D004496 ORTHO05D005513 8.6e-12 75.5 275 34.5
GSVIVG01004818001 Vitis vinifera HOM05D004496 ORTHO05D005513 8.6e-12 75.5 239 29.7
TAR626G0621 Trochodendron aralioides HOM05D004496 ORTHO05D005513 1.5e-11 74.7 251 33.5
TWI38G0680 Tripterygium wilfordii HOM05D004496 ORTHO05D005513 4.2e-11 73.2 346 29.8
RcHm_v2.0_Chr5g0001991 Rosa chinensis HOM05D004496 ORTHO05D005513 5.6e-11 72.8 145 38.6
Aqoxy1G03511 Aquilegia oxysepala HOM05D004496 ORTHO05D005513 7.2e-11 72.4 364 25.8
Zm00001eb112850 Zea mays HOM05D004496 ORTHO05D005513 7.2e-11 72.4 362 35.6
FvH4_3g01370 Fragaria vesca HOM05D004496 ORTHO05D005513 2.1e-10 70.9 331 27.8
Manes.17G027100 Manihot esculenta HOM05D004496 ORTHO05D005513 3.6e-10 70.1 298 31.2
arahy.Tifrunner.gnm1.ann1.SI7QTZ Arachis hypogaea HOM05D004496 ORTHO05D005513 6.1e-10 69.3 333 27.3
Nn1g06547 Nelumbo nucifera HOM05D004496 ORTHO05D005513 6.1e-10 69.3 89 48.3
Atru.chr10.2286 Acer truncatum HOM05D004496 ORTHO05D005513 8.0e-10 68.9 297 31.0
Phvul.003G081900 Phaseolus vulgaris HOM05D004496 ORTHO05D005513 8.0e-10 68.9 317 29.3
PSO210G3984 Papaver somniferum HOM05D004496 ORTHO05D005513 3.0e-09 67.0 380 26.1
Glyma.07G263700 Glycine max HOM05D004496 ORTHO05D005513 4.0e-09 66.6 319 30.4
TWI63G1509 Tripterygium wilfordii HOM05D004496 ORTHO05D005513 4.0e-09 66.6 338 32.2
VMungo1215G0904 Vigna mungo HOM05D004496 ORTHO05D005513 4.0e-09 66.6 314 27.1
Nn1g01506 Nelumbo nucifera HOM05D004496 ORTHO05D005513 6.8e-09 65.9 89 48.3
arahy.Tifrunner.gnm1.ann1.EH65IB Arachis hypogaea HOM05D004496 ORTHO05D005513 1.5e-08 64.7 334 27.2
BraA03t14400Z Brassica rapa HOM05D004496 ORTHO05D005513 1.5e-08 64.7 126 37.3
Eucgr.D01366 Eucalyptus grandis HOM05D004496 ORTHO05D005513 5.7e-08 62.8 103 41.7
Sp6g04650 Schrenkiella parvula HOM05D004496 ORTHO05D005513 5.7e-08 62.8 319 28.8
Zm00001eb169380 Zea mays HOM05D004496 ORTHO05D005513 5.7e-08 62.8 350 34.3
Aa31LG9G9910 Aethionema arabicum HOM05D004496 ORTHO05D005950 2.9e-07 60.5 218 30.3
Lj4g0028181 Lotus japonicus HOM05D004496 ORTHO05D005513 1.8e-06 57.8 306 33.7
Psat4g004280 Pisum sativum HOM05D004496 ORTHO05D005513 1.8e-06 57.8 94 41.5


User provided reference genes

Program Settings