Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G01874 Striga asiatica HOM05D007192 ORTHO05D009034 1.1e-61 240.0 142 100.0
Migut.M01397 Erythranthe guttata HOM05D007192 ORTHO05D009034 2.2e-28 129.4 142 63.4
MSTRG.14611 Avicennia marina HOM05D007192 ORTHO05D009034 1.6e-26 123.2 143 60.1
Dinv07405 Davidia involucrata HOM05D007192 ORTHO05D009034 4.5e-26 121.7 144 56.2
Oeu016820.1 Olea europaea HOM05D007192 ORTHO05D009034 7.7e-26 120.9 147 52.4
PGSC0003DMG400013349 Solanum tuberosum HOM05D007192 ORTHO05D009034 2.2e-25 119.4 145 59.3
Solyc11g012280.2 Solanum lycopersicum HOM05D007192 ORTHO05D009034 2.9e-25 119.0 145 59.3
Sopen11g007060 Solanum pennellii HOM05D007192 ORTHO05D009034 3.8e-25 118.6 145 59.3
SalBow8G5140 Salvia bowleyana HOM05D007192 ORTHO05D009034 1.9e-24 116.3 137 57.7
Dinv13967 Davidia involucrata HOM05D001152 ORTHO05D000967 1.2e-23 113.6 148 50.0
Hma1.2p1_0657F.1_g197140 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 1.2e-23 113.6 145 51.0
MELO3C007436.2 Cucumis melo HOM05D007192 ORTHO05D009034 4.7e-23 111.7 144 48.6
Prupe.4G010200 Prunus persica HOM05D007192 ORTHO05D009034 6.1e-23 111.3 136 53.7
unitig_37.g12189 Utricularia gibba HOM05D007192 ORTHO05D009034 6.1e-23 111.3 137 53.3
RcHm_v2.0_Chr5g0001481 Rosa chinensis HOM05D007192 ORTHO05D009034 1.4e-22 110.2 141 51.1
GSVIVG01003334001 Vitis vinifera HOM05D007192 ORTHO05D009034 1.4e-22 110.2 140 57.9
FvH4_3g00960 Fragaria vesca HOM05D007192 ORTHO05D009034 1.8e-22 109.8 140 50.7
TWI38G0802 Tripterygium wilfordii HOM05D007192 ORTHO05D009034 1.8e-22 109.8 140 52.9
PGR042G3283 Punica granatum HOM05D007192 ORTHO05D009034 2.3e-22 109.4 135 51.9
Ciclev10016735m.g Citrus clementina HOM05D007192 ORTHO05D009034 4.0e-22 108.6 138 54.3
Peaxi162Scf00352g00210 Petunia axillaris HOM05D007192 ORTHO05D009034 4.0e-22 108.6 142 54.2
Thecc.06G233600 Theobroma cacao HOM05D007192 ORTHO05D009034 5.2e-22 108.2 142 54.2
CDE08G0359 Ceratophyllum demersum HOM05D007192 ORTHO05D009034 6.8e-22 107.8 149 50.3
ClCG01G021480 Citrullus lanatus HOM05D007192 ORTHO05D009034 2.6e-21 105.9 142 52.8
Potri.016G013500 Populus trichocarpa HOM05D007192 ORTHO05D009034 2.6e-21 105.9 135 53.3
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 3.4e-21 105.5 100 60.0
Sed0016386 Sechium edule HOM05D007192 ORTHO05D009034 3.4e-21 105.5 140 49.3
TAR629G2173 Trochodendron aralioides HOM05D007192 ORTHO05D009034 7.5e-21 104.4 99 62.6
Gohir.A06G205200 Gossypium hirsutum HOM05D007192 ORTHO05D009034 9.8e-21 104.0 99 65.7
Gohir.D06G216300 Gossypium hirsutum HOM05D007192 ORTHO05D009034 1.3e-20 103.6 99 65.7
Gorai.010G249900 Gossypium raimondii HOM05D007192 ORTHO05D009034 1.3e-20 103.6 99 65.7
CiPaw.09G102500 Carya illinoinensis HOM05D007192 ORTHO05D009034 1.7e-20 103.2 144 45.8
CsaV3_6G048500 Cucumis sativus L. HOM05D007192 ORTHO05D009034 2.2e-20 102.8 137 52.6
Duzib235G0907 Durio zibethinus HOM05D007192 ORTHO05D009034 2.8e-20 102.4 145 55.9
Atru.chr1.2446 Acer truncatum HOM05D007192 ORTHO05D009034 8.3e-20 100.9 142 52.1
Cc09_g00850 Coffea canephora HOM05D007192 ORTHO05D009034 8.3e-20 100.9 141 56.7
Actinidia26860 Actinidia chinensis HOM05D007192 ORTHO05D009034 1.4e-19 100.1 140 51.4
MD05G1358000 Malus domestica HOM05D007192 ORTHO05D009034 1.4e-19 100.1 115 57.4
Nn1g07392 Nelumbo nucifera HOM05D007192 ORTHO05D009034 1.8e-19 99.8 140 47.9
Glyma.17G008700 Glycine max HOM05D007192 ORTHO05D009034 2.4e-19 99.4 114 57.0
Nitab4.5_0000143g0180 Nicotiana tabacum HOM05D007192 ORTHO05D009034 3.1e-19 99.0 148 54.1
CANSAT56G2005 Cannabis sativa HOM05D007192 ORTHO05D009034 4.1e-19 98.6 137 53.3
Eucgr.E03926 Eucalyptus grandis HOM05D007192 ORTHO05D009034 4.1e-19 98.6 99 60.6
Nitab4.5_0011595g0010 Nicotiana tabacum HOM05D007192 ORTHO05D009034 5.4e-19 98.2 148 52.0
MD10G1331900 Malus domestica HOM05D007192 ORTHO05D009034 7.0e-19 97.8 141 50.4
Phvul.003G083700 Phaseolus vulgaris HOM05D007192 ORTHO05D009034 7.0e-19 97.8 137 52.6
Haze_08662 Corylus avellana HOM05D007192 ORTHO05D009034 9.1e-19 97.4 104 67.3
Glyma.07G265300 Glycine max HOM05D007192 ORTHO05D009034 9.1e-19 97.4 119 55.5
Ah.14g087620 Amaranthus hybridus HOM05D007192 ORTHO05D009034 1.2e-18 97.1 114 52.6
QL05p069683 Quercus lobata HOM05D007192 ORTHO05D009034 1.2e-18 97.1 143 50.3
Sabra06G0008700 Salix brachista HOM05D007192 ORTHO05D009034 2.7e-18 95.9 135 49.6
Rhsim02G0145900 Rhododendron simsii HOM05D007192 ORTHO05D009034 4.5e-18 95.1 137 51.8
Aqoxy2G00603 Aquilegia oxysepala HOM05D007192 ORTHO05D009034 5.9e-18 94.7 145 44.8
Hund23406 Selenicereus undatus HOM05D007192 ORTHO05D009034 7.7e-18 94.4 136 50.7
THA.LOC104799643 Tarenaya hassleriana HOM05D007192 ORTHO05D009034 1.7e-17 93.2 105 57.1
HanXRQChr10g0285171 Helianthus annuus HOM05D007192 ORTHO05D009034 3.8e-17 92.0 100 58.0
Lj4g0002454 Lotus japonicus HOM05D007192 ORTHO05D009034 3.8e-17 92.0 104 58.7
Psat4g005120 Pisum sativum HOM05D007192 ORTHO05D009034 6.5e-17 91.3 108 62.0
TPR.G37116 Trifolium pratense HOM05D007192 ORTHO05D009034 1.1e-16 90.5 106 56.6
HPP92_000005 Vanilla planifolia HOM05D007192 ORTHO05D009034 1.5e-16 90.1 101 46.5
Medtr4g133070 Medicago truncatula HOM05D007192 ORTHO05D009034 2.5e-16 89.4 108 59.3
Manes.09G076800 Manihot esculenta HOM05D007192 ORTHO05D009034 3.3e-16 89.0 139 52.5
Hma1.2p1_0657F.1_g197150 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 7.2e-16 87.8 201 36.8
BNapus_Darmor_BZH_scaffold_38p01780 Brassica napus HOM05D007192 ORTHO05D009034 9.5e-16 87.4 95 64.2
BraA02t05557Z Brassica rapa HOM05D007192 ORTHO05D009034 9.5e-16 87.4 95 64.2
Lsat_1_v5_gn_0_23500 Lactuca sativa HOM05D007192 ORTHO05D009034 1.2e-15 87.0 141 47.5
Sp6g24270 Schrenkiella parvula HOM05D007192 ORTHO05D009034 3.6e-15 85.5 96 62.5
Sc24g0000280 Simmondsia chinensis HOM05D007192 ORTHO05D009034 4.7e-15 85.1 86 66.3
PSO541G1889 Papaver somniferum HOM05D007192 ORTHO05D009034 1.4e-14 83.6 151 49.7
BcaB05g22869 Brassica carinata HOM05D007192 ORTHO05D009034 2.3e-14 82.8 97 55.7
Lalb_Chr07g0176981 Lupinus albus HOM05D007192 ORTHO05D009034 6.8e-14 81.3 102 58.8
PSO675G6515 Papaver somniferum HOM05D007192 ORTHO05D009034 6.8e-14 81.3 151 49.7
AT5G20130 Arabidopsis thaliana HOM05D007192 ORTHO05D009034 1.5e-13 80.1 95 64.2
Thhalv10014703m.g Eutrema salsugineum HOM05D007192 ORTHO05D009034 3.4e-13 79.0 142 50.0
Carub.0006s1851 Capsella rubella HOM05D007192 ORTHO05D009034 4.4e-13 78.6 92 64.1
FAN21G0227 Fragaria x ananassa HOM05D007192 ORTHO05D009034 4.4e-13 78.6 79 63.3
arahy.Tifrunner.gnm1.ann1.E8J80R Arachis hypogaea HOM05D007192 ORTHO05D009034 5.7e-13 78.2 138 49.3
CAN.G1186.41 Capsicum annuum HOM05D007192 ORTHO05D009034 7.5e-13 77.8 80 68.8
C03p11420 Brassica napus HOM05D007192 ORTHO05D009034 9.8e-13 77.4 96 63.5
Duzib192G0317 Durio zibethinus HOM05D007192 ORTHO05D009034 9.8e-13 77.4 81 54.3
DCAR_004888 Daucus carota HOM05D007192 ORTHO05D009034 1.3e-12 77.0 120 52.5
CARHR192700 Cardamine hirsuta HOM05D007192 ORTHO05D009034 1.7e-12 76.6 144 46.5
A03p09840 Brassica napus HOM05D007192 ORTHO05D009034 3.7e-12 75.5 96 64.6
BraA03t10299Z Brassica rapa HOM05D007192 ORTHO05D009034 3.7e-12 75.5 96 64.6
EL10Ac8g20192 Beta vulgaris HOM05D007192 ORTHO05D009034 4.9e-12 75.1 127 49.6
ATR0776G058 Amborella trichopoda HOM05D007192 ORTHO05D009034 7.0e-11 71.2 86 59.3
BcaC03g13735 Brassica carinata HOM05D007192 ORTHO05D009034 1.2e-10 70.5 95 51.6
BolC2t07017H Brassica oleracea HOM05D007192 ORTHO05D009034 1.2e-10 70.5 95 51.6
ECA248G2945 Erigeron canadensis HOM05D007192 ORTHO05D009034 1.0e-09 67.4 140 46.4
Lj2A261T34 Lonicera japonica HOM05D007192 ORTHO05D009034 2.3e-09 66.2 80 66.2
Cfa000100 Carpinus fangiana HOM05D007192 ORTHO05D009034 6.6e-09 64.7 79 63.3
AL6G31680 Arabidopsis lyrata HOM05D007192 ORTHO05D009034 8.6e-09 64.3 95 48.4
vmacro03641 Vaccinium macrocarpon HOM05D007192 ORTHO05D009034 1.9e-08 63.2 82 47.6
Aa31LG2G11450 Aethionema arabicum HOM05D007192 ORTHO05D009034 2.5e-08 62.8 76 56.6
VMungo1215G1962 Vigna mungo HOM05D007192 ORTHO05D009034 3.3e-08 62.4 75 61.3


User provided reference genes

Program Settings