Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G01872 Striga asiatica HOM05D007829 ORTHO05D009903 2.0e-138 495.7 249 100.0
Migut.M01399 Erythranthe guttata HOM05D007829 ORTHO05D009903 1.6e-66 256.9 201 62.7
Hma1.2p1_0657F.1_g197120 Hydrangea macrophylla HOM05D007829 ORTHO05D009903 2.6e-53 213.0 193 56.5
Rhsim02G0099400 Rhododendron simsii HOM05D007829 ORTHO05D009903 3.4e-53 212.6 186 57.0
Nn1g07397 Nelumbo nucifera HOM05D007829 ORTHO05D009903 2.4e-51 206.5 177 56.5
CSS0014217 Camellia sinensis var. sinensis HOM05D007829 ORTHO05D009903 9.3e-51 204.5 209 51.7
Prupe.4G010000 Prunus persica HOM05D007829 ORTHO05D009903 9.3e-51 204.5 192 53.1
Dinv07407 Davidia involucrata HOM05D007829 ORTHO05D009903 1.6e-50 203.8 202 51.5
Actinidia39272 Actinidia chinensis HOM05D007829 ORTHO05D009903 2.1e-50 203.4 184 55.4
Oeu002768.1 Olea europaea HOM05D007829 ORTHO05D009903 8.7e-49 198.0 169 57.4
Eucgr.D01411 Eucalyptus grandis HOM05D007829 ORTHO05D009903 2.4e-46 189.9 174 54.0
Sc05g0009620 Simmondsia chinensis HOM05D007829 ORTHO05D009903 2.4e-46 189.9 188 47.9
Aqoxy2G02687 Aquilegia oxysepala HOM05D007829 ORTHO05D009903 9.0e-46 188.0 199 46.2
Cpa.g.sc75.113 Carica papaya HOM05D007829 ORTHO05D009903 9.0e-46 188.0 187 51.3
Manes.08G071000 Manihot esculenta HOM05D007829 ORTHO05D009903 1.5e-45 187.2 181 51.9
PSO675G8147 Papaver somniferum HOM05D007829 ORTHO05D009903 2.0e-45 186.8 211 52.1
CiPaw.10G078200 Carya illinoinensis HOM05D007829 ORTHO05D009903 4.5e-45 185.7 200 49.5
Cc00_g34400 Coffea canephora HOM05D007829 ORTHO05D009903 1.3e-44 184.1 211 47.4
MD10G1332100 Malus domestica HOM05D007829 ORTHO05D009903 1.3e-44 184.1 191 48.2
PSO541G5076 Papaver somniferum HOM05D007829 ORTHO05D009903 1.7e-44 183.7 205 52.2
Potri.016G013200 Populus trichocarpa HOM05D007829 ORTHO05D009903 2.2e-44 183.3 187 49.7
Gohir.A10G009200 Gossypium hirsutum HOM05D007829 ORTHO05D009903 3.2e-43 179.5 179 49.2
Thecc.06G233800 Theobroma cacao HOM05D007829 ORTHO05D009903 3.2e-43 179.5 192 48.4
TWI38G1785 Tripterygium wilfordii HOM05D007829 ORTHO05D009903 4.2e-43 179.1 195 47.7
SalBow8G1028 Salvia bowleyana HOM05D007829 ORTHO05D009903 5.5e-43 178.7 179 53.6
Gorai.011G009700 Gossypium raimondii HOM05D007829 ORTHO05D009903 7.1e-43 178.3 179 48.6
Gohir.D10G008900 Gossypium hirsutum HOM05D007829 ORTHO05D009903 9.3e-43 177.9 179 48.0
PGR004G1136 Punica granatum HOM05D007829 ORTHO05D009903 1.6e-42 177.2 179 50.8
Ciclev10018278m.g Citrus clementina HOM05D007829 ORTHO05D009903 2.7e-42 176.4 136 62.5
COL.COLO4_31889 Corchorus olitorius HOM05D007829 ORTHO05D009903 6.0e-42 175.3 211 43.6
THA.LOC104813576 Tarenaya hassleriana HOM05D007829 ORTHO05D009903 7.9e-42 174.9 173 49.1
DCAR_004889 Daucus carota HOM05D003856 ORTHO05D004547 1.8e-41 173.7 134 59.7
Lj6g0010113 Lotus japonicus HOM05D007829 ORTHO05D009903 5.1e-41 172.2 177 46.3
TAR627G0564 Trochodendron aralioides HOM05D007829 ORTHO05D009903 8.7e-41 171.4 201 45.3
TAR627G1193 Trochodendron aralioides HOM05D007829 ORTHO05D009903 3.3e-40 169.5 204 44.6
CARHR229280 Cardamine hirsuta HOM05D007829 ORTHO05D009903 9.7e-40 167.9 167 49.7
Sabra16G0002200 Salix brachista HOM05D007829 ORTHO05D009903 2.8e-39 166.4 201 44.3
arahy.Tifrunner.gnm1.ann1.G424KC Arachis hypogaea HOM05D007829 ORTHO05D009903 6.3e-39 165.2 175 45.1
BraA01t01318Z Brassica rapa HOM05D007829 ORTHO05D009903 1.1e-38 164.5 177 47.5
A01p13730 Brassica napus HOM05D007829 ORTHO05D009903 1.8e-38 163.7 145 51.0
C01p16640 Brassica napus HOM05D007829 ORTHO05D009903 5.3e-38 162.2 177 48.6
BolC1t01611H Brassica oleracea HOM05D007829 ORTHO05D009903 2.0e-37 160.2 174 48.9
BcaC09g51100 Brassica carinata HOM05D007829 ORTHO05D009903 2.6e-37 159.8 174 48.9
Medtr2g025760 Medicago truncatula HOM05D007829 ORTHO05D009903 3.8e-36 156.0 175 45.7
Sabra16G0015800 Salix brachista HOM05D007829 ORTHO05D009903 5.0e-36 155.6 185 43.8
Solyc11g012300.1 Solanum lycopersicum HOM05D007829 ORTHO05D009903 5.0e-36 155.6 177 45.2
Psat1g175960 Pisum sativum HOM05D007829 ORTHO05D009903 6.5e-36 155.2 173 45.1
Duzib235G0645 Durio zibethinus HOM05D007829 ORTHO05D009903 1.6e-34 150.6 117 59.0
QL05p069622 Quercus lobata HOM05D007829 ORTHO05D009903 1.0e-33 147.9 177 44.6
Sp7g20500 Schrenkiella parvula HOM05D007829 ORTHO05D009903 1.8e-33 147.1 192 42.2
unitig_5.g30996 Utricularia gibba HOM05D000093 ORTHO05D001309 5.7e-32 142.1 168 48.8
ATR0712G049 Amborella trichopoda HOM05D007829 ORTHO05D009903 7.4e-32 141.7 134 47.0
FAN21G3309 Fragaria x ananassa HOM05D007829 ORTHO05D009903 2.8e-31 139.8 177 40.1
CANSAT56G1477 Cannabis sativa HOM05D007829 ORTHO05D009903 3.7e-31 139.4 206 41.7
CDE11G1237 Ceratophyllum demersum HOM05D007829 ORTHO05D009903 6.3e-31 138.7 189 38.1
AT4G22370 Arabidopsis thaliana HOM05D007829 ORTHO05D009903 1.1e-30 137.9 164 42.7
RcHm_v2.0_Chr5g0001461 Rosa chinensis HOM05D007829 ORTHO05D009903 1.1e-30 137.9 175 41.7
Sopen11g007080 Solanum pennellii HOM05D007829 ORTHO05D009903 1.1e-30 137.9 153 45.8
Peaxi162Scf00352g00215 Petunia axillaris HOM05D007829 ORTHO05D009903 1.4e-30 137.5 140 47.1
Carub.0007s1893 Capsella rubella HOM05D007829 ORTHO05D009903 1.8e-30 137.1 143 46.9
FvH4_3g00940 Fragaria vesca HOM05D007829 ORTHO05D009903 1.8e-30 137.1 175 38.9
TPR.G13103 Trifolium pratense HOM05D007829 ORTHO05D009903 3.1e-30 136.3 151 45.7
PGSC0003DMG400013350 Solanum tuberosum HOM05D007829 ORTHO05D009903 9.1e-30 134.8 153 45.1
Glyma.15G114900 Glycine max HOM05D007829 ORTHO05D009903 2.6e-29 133.3 205 36.1
VMungo0540G1426 Vigna mungo HOM05D007829 ORTHO05D009903 5.9e-29 132.1 177 40.1
Phvul.006G143000 Phaseolus vulgaris HOM05D007829 ORTHO05D009903 6.5e-28 128.6 192 35.4
Glyma.09G010400 Glycine max HOM05D007829 ORTHO05D009903 3.2e-27 126.3 185 38.4
Lalb_Chr15g0088001 Lupinus albus HOM05D007829 ORTHO05D009903 7.2e-27 125.2 199 36.7
FAN25G0937 Fragaria x ananassa HOM05D007829 ORTHO05D009903 9.4e-27 124.8 184 38.0
TAR629G0037 Trochodendron aralioides HOM05D007829 ORTHO05D009903 1.2e-26 124.4 118 52.5
MBI19_g06149_MAGBIO Magnolia biondii HOM05D007829 ORTHO05D009903 2.3e-25 120.2 129 45.7
Thhalv10027004m.g Eutrema salsugineum HOM05D007829 ORTHO05D009903 2.6e-24 116.7 125 47.2
Aa31LG6G4470 Aethionema arabicum HOM05D007829 ORTHO05D009903 6.3e-23 112.1 138 45.7
AL7G31240 Arabidopsis lyrata HOM05D007829 ORTHO05D009903 2.0e-21 107.1 93 51.6
unitig_748.g7131 Utricularia gibba HOM05D007829 ORTHO05D009903 1.1e-19 101.3 90 55.6
Sed0017863 Sechium edule HOM05D007829 ORTHO05D009903 7.2e-19 98.6 167 32.9
TPR.G18790 Trifolium pratense HOM05D007829 ORTHO05D009903 7.2e-19 98.6 110 45.5
Cfa000096 Carpinus fangiana HOM05D007829 ORTHO05D009903 3.9e-17 92.8 104 45.2
ClCG01G021470 Citrullus lanatus HOM05D007829 ORTHO05D009903 4.1e-14 82.8 195 30.8
SEGI_16879 Sequoiadendron giganteum HOM05D002745 ORTHO05D002945 9.1e-14 81.6 147 34.7
MBI16_g31712_MAGBIO Magnolia biondii HOM05D007829 ORTHO05D009903 1.2e-13 81.3 122 34.4
SEGI_30590 Sequoiadendron giganteum HOM05D002745 ORTHO05D002945 7.7e-13 78.6 146 34.2
Sp7g00520 Schrenkiella parvula HOM05D002745 ORTHO05D002945 2.2e-12 77.0 116 31.9
SEGI_29799 Sequoiadendron giganteum HOM05D002745 ORTHO05D002945 3.8e-12 76.3 182 25.8
Thecc.03G284700 Theobroma cacao HOM05D002745 ORTHO05D002945 6.5e-12 75.5 118 33.1
CsaV3_6G048490 Cucumis sativus L. HOM05D007829 ORTHO05D009903 1.9e-11 73.9 174 28.7
DCAR_000629 Daucus carota HOM05D002745 ORTHO05D002945 1.9e-11 73.9 178 29.2
PSO832G1614 Papaver somniferum HOM05D002745 ORTHO05D002945 2.5e-11 73.6 193 25.9
Solyc11g012310.1 Solanum lycopersicum HOM05D007829 ORTHO05D009903 2.5e-11 73.6 81 42.0
AL7G47950 Arabidopsis lyrata HOM05D002745 ORTHO05D002945 4.2e-11 72.8 152 28.9
ATR0661G383 Amborella trichopoda HOM05D002745 ORTHO05D002945 5.5e-11 72.4 132 30.3
CSS0032449 Camellia sinensis var. sinensis HOM05D002745 ORTHO05D002945 5.5e-11 72.4 147 29.3
TWI18G0548 Tripterygium wilfordii HOM05D002745 ORTHO05D002945 5.5e-11 72.4 133 30.8
CARHR291200 Cardamine hirsuta HOM05D002745 ORTHO05D002945 7.2e-11 72.0 171 26.3
PGR042G2485 Punica granatum HOM05D002745 ORTHO05D002945 7.2e-11 72.0 125 30.4
Ciclev10022055m.g Citrus clementina HOM05D002745 ORTHO05D002945 9.4e-11 71.6 123 31.7
Rhsim08G0115600 Rhododendron simsii HOM05D002745 ORTHO05D002945 9.4e-11 71.6 113 32.7
Carub.0007s3403 Capsella rubella HOM05D002745 ORTHO05D002945 1.6e-10 70.9 132 29.5
PSO063G0080 Papaver somniferum HOM05D002745 ORTHO05D002945 1.6e-10 70.9 138 26.8
THA.LOC104817848 Tarenaya hassleriana HOM05D002745 ORTHO05D002945 1.6e-10 70.9 143 28.7
AT5G41470 Arabidopsis thaliana HOM05D002745 ORTHO05D002945 2.1e-10 70.5 155 27.7
CANSAT56G3529 Cannabis sativa HOM05D002745 ORTHO05D002945 2.1e-10 70.5 119 31.1
Carub.0002s1834 Capsella rubella HOM05D002745 ORTHO05D002945 2.1e-10 70.5 196 27.0
CAN.G1039.10 Capsicum annuum HOM05D002745 ORTHO05D002945 2.1e-10 70.5 124 31.5
SMO200G0065 Selaginella moellendorffii HOM05D002745 ORTHO05D002945 2.7e-10 70.1 139 28.1
SEGI_04580 Sequoiadendron giganteum HOM05D002745 ORTHO05D002945 2.7e-10 70.1 182 29.7
Solyc11g042620.3 Solanum lycopersicum HOM05D002745 ORTHO05D002945 2.7e-10 70.1 123 30.9
SGA_v2.0_scaffold118G32594 Striga asiatica HOM05D002745 ORTHO05D002945 3.6e-10 69.7 144 29.9
AL2G31140 Arabidopsis lyrata HOM05D002745 ORTHO05D002945 4.7e-10 69.3 152 29.6
AT1G71480 Arabidopsis thaliana HOM05D002745 ORTHO05D002945 4.7e-10 69.3 175 28.0
Dinv38911 Davidia involucrata HOM05D002745 ORTHO05D002945 4.7e-10 69.3 133 29.3
MD06G1089000 Malus domestica HOM05D002745 ORTHO05D002945 4.7e-10 69.3 109 31.2
Cpa.g.sc180.25 Carica papaya HOM05D002745 ORTHO05D002945 6.1e-10 68.9 140 26.4
Thecc.07G155300 Theobroma cacao HOM05D002745 ORTHO05D002945 6.1e-10 68.9 126 31.0
CiPaw.03G016400 Carya illinoinensis HOM05D002745 ORTHO05D002945 8.0e-10 68.6 123 31.7
Hma1.2p1_0004F.1_g003790 Hydrangea macrophylla HOM05D002745 ORTHO05D002945 8.0e-10 68.6 112 33.9
Lsat_1_v5_gn_6_4781 Lactuca sativa HOM05D002745 ORTHO05D002945 8.0e-10 68.6 133 30.8
Sopen11g018770 Solanum pennellii HOM05D002745 ORTHO05D002945 8.0e-10 68.6 123 30.9
vmacro17840 Vaccinium macrocarpon HOM05D002745 ORTHO05D002945 8.0e-10 68.6 124 29.8
Cfa008098 Carpinus fangiana HOM05D002745 ORTHO05D002945 1.0e-09 68.2 121 31.4
Hma1.2p1_0004F.1_g003800 Hydrangea macrophylla HOM05D002745 ORTHO05D002945 1.0e-09 68.2 123 32.5
Aqoxy5G00847 Aquilegia oxysepala HOM05D002745 ORTHO05D002945 1.4e-09 67.8 112 33.0
Cpa.g.sc21.67 Carica papaya HOM05D002745 ORTHO05D002945 1.4e-09 67.8 110 32.7
Manes.18G119000 Manihot esculenta HOM05D002745 ORTHO05D002945 1.4e-09 67.8 121 29.8
arahy.Tifrunner.gnm1.ann1.4VP9UF Arachis hypogaea HOM05D002745 ORTHO05D002945 1.8e-09 67.4 123 30.1
Peaxi162Scf00078g00352 Petunia axillaris HOM05D002745 ORTHO05D002945 1.8e-09 67.4 110 31.8
Prupe.1G545800 Prunus persica HOM05D002745 ORTHO05D002945 1.8e-09 67.4 119 31.9
Cc10_g08820 Coffea canephora HOM05D002745 ORTHO05D002945 2.3e-09 67.0 112 33.0
Dinv02444 Davidia involucrata HOM05D002745 ORTHO05D002945 2.3e-09 67.0 114 31.6
Duzib205G0538 Durio zibethinus HOM05D002745 ORTHO05D002945 2.3e-09 67.0 165 26.7
Nitab4.5_0006500g0010 Nicotiana tabacum HOM05D002745 ORTHO05D002945 2.3e-09 67.0 123 30.9
Gohir.A12G234200 Gossypium hirsutum HOM05D002745 ORTHO05D002945 3.0e-09 66.6 172 27.3
Lsat_1_v5_gn_4_133100 Lactuca sativa HOM05D002745 ORTHO05D002945 3.0e-09 66.6 130 28.5
MD08G1213700 Malus domestica HOM05D002745 ORTHO05D002945 3.0e-09 66.6 119 30.3
ATR1089G026 Amborella trichopoda HOM05D002745 ORTHO05D002945 4.0e-09 66.2 117 32.5
FvH4_2g14400 Fragaria vesca HOM05D002745 ORTHO05D002945 4.0e-09 66.2 127 32.3
FAN20G0622 Fragaria x ananassa HOM05D002745 ORTHO05D002945 4.0e-09 66.2 127 31.5
Gohir.D12G233100 Gossypium hirsutum HOM05D002745 ORTHO05D002945 4.0e-09 66.2 172 26.7
PSO017G3694 Papaver somniferum HOM05D002745 ORTHO05D002945 4.0e-09 66.2 123 30.9
Ah.11g043280 Amaranthus hybridus HOM05D002745 ORTHO05D002945 5.2e-09 65.9 121 29.8
Lj9A699T54 Lonicera japonica HOM05D002745 ORTHO05D002945 5.2e-09 65.9 110 30.9
Gorai.008G249500 Gossypium raimondii HOM05D002745 ORTHO05D002945 6.7e-09 65.5 172 26.7
Sc22g0005360 Simmondsia chinensis HOM05D002745 ORTHO05D002945 6.7e-09 65.5 110 29.1
arahy.Tifrunner.gnm1.ann1.A85HWF Arachis hypogaea HOM05D002745 ORTHO05D002945 8.8e-09 65.1 136 27.9
FvH4_5g33211 Fragaria vesca HOM05D002745 ORTHO05D002945 8.8e-09 65.1 119 30.3
FAN18G3413 Fragaria x ananassa HOM05D000972 ORTHO05D007902 8.8e-09 65.1 119 30.3
FAN24G0836 Fragaria x ananassa HOM05D002745 ORTHO05D002945 8.8e-09 65.1 126 32.5
RcHm_v2.0_Chr7g0231601 Rosa chinensis HOM05D002745 ORTHO05D002945 8.8e-09 65.1 151 30.5
Sabra19G0085500 Salix brachista HOM05D002745 ORTHO05D002945 1.2e-08 64.7 110 30.9
FAN08G1704 Fragaria x ananassa HOM05D002745 ORTHO05D002945 1.5e-08 64.3 119 28.6
FAN15G2191 Fragaria x ananassa HOM05D002745 ORTHO05D002945 1.5e-08 64.3 127 31.5
Actinidia33738 Actinidia chinensis HOM05D002745 ORTHO05D002945 2.0e-08 63.9 96 34.4
Duzib213G0118 Durio zibethinus HOM05D002745 ORTHO05D002945 2.0e-08 63.9 126 30.2
Migut.C01366 Erythranthe guttata HOM05D002745 ORTHO05D002945 2.6e-08 63.5 121 28.9
DCAR_014054 Daucus carota HOM05D002745 ORTHO05D002945 3.3e-08 63.2 120 29.2
LjContig00222g0027382 Lotus japonicus HOM05D002745 ORTHO05D002945 4.4e-08 62.8 136 28.7
Medtr7g018880 Medicago truncatula HOM05D002745 ORTHO05D002945 4.4e-08 62.8 148 27.7
Potri.019G074800 Populus trichocarpa HOM05D002745 ORTHO05D002945 4.4e-08 62.8 110 30.0
TAR628G0730 Trochodendron aralioides HOM05D002745 ORTHO05D002945 4.4e-08 62.8 117 29.9
Glyma.11G014300 Glycine max HOM05D002745 ORTHO05D002945 7.5e-08 62.0 123 30.1
Psat3g191440 Pisum sativum HOM05D002745 ORTHO05D002945 9.7e-08 61.6 142 26.1
HPP92_009206 Vanilla planifolia HOM05D002745 ORTHO05D002945 1.3e-07 61.2 106 28.3
Sed0018292 Sechium edule HOM05D002745 ORTHO05D002945 1.7e-07 60.8 141 29.8
Nitab4.5_0015422g0020 Nicotiana tabacum HOM05D007829 ORTHO05D009903 2.8e-07 60.1 217 25.3
MSTRG.1588 Avicennia marina HOM05D002745 ORTHO05D002945 4.8e-07 59.3 137 27.0
Glyma.01G231300 Glycine max HOM05D002745 ORTHO05D002945 6.3e-07 58.9 93 33.3
Prupe.5G104900 Prunus persica HOM05D002745 ORTHO05D002945 8.2e-07 58.5 125 28.0
CsaV3_5G026810 Cucumis sativus L. HOM05D002745 ORTHO05D002945 1.1e-06 58.2 140 26.4
TPR.G28573 Trifolium pratense HOM05D002745 ORTHO05D002945 1.1e-06 58.2 130 28.5
arahy.Tifrunner.gnm1.ann1.10XUBW Arachis hypogaea HOM05D007829 ORTHO05D009903 1.8e-06 57.4 48 47.9
VMungo1215G1904 Vigna mungo HOM05D002745 ORTHO05D002945 1.8e-06 57.4 136 27.9
Actinidia29392 Actinidia chinensis HOM05D002745 ORTHO05D002945 2.4e-06 57.0 137 27.7
EL10Ac1g01732 Beta vulgaris HOM05D002745 ORTHO05D002945 2.4e-06 57.0 121 28.1
Haze_13938 Corylus avellana HOM05D002745 ORTHO05D002945 2.4e-06 57.0 92 31.5
Sed0022750 Sechium edule HOM05D007829 ORTHO05D009903 2.4e-06 57.0 122 29.5
ATR0712G092 Amborella trichopoda HOM05D007829 ORTHO05D009903 5.3e-06 55.8 54 50.0
MBI06_g21934_MAGBIO Magnolia biondii HOM05D002745 ORTHO05D002945 5.3e-06 55.8 137 27.0
RcHm_v2.0_Chr6g0276731 Rosa chinensis HOM05D002745 ORTHO05D002945 5.3e-06 55.8 114 31.6
unitig_37.g13082 Utricularia gibba HOM05D002745 ORTHO05D002945 5.3e-06 55.8 145 27.6
Lsat_1_v5_gn_4_62060 Lactuca sativa HOM05D007829 ORTHO05D009903 7.0e-06 55.5 72 34.7
CSS0032411 Camellia sinensis var. sinensis HOM05D002745 ORTHO05D002945 9.1e-06 55.1 117 29.9
Phvul.002G035800 Phaseolus vulgaris HOM05D002745 ORTHO05D002945 9.1e-06 55.1 136 26.5


User provided reference genes

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