Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 2.8e-64 248.4 122 100.0
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 5.6e-41 171.0 124 73.4
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 2.3e-39 165.6 122 68.0
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 4.4e-38 161.4 125 68.8
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 9.9e-38 160.2 121 66.9
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 9.9e-38 160.2 126 66.7
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 1.3e-37 159.8 122 69.7
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 1.7e-37 159.5 122 69.7
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 3.7e-37 158.3 122 65.6
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 3.7e-37 158.3 126 65.9
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 6.4e-37 157.5 124 66.1
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 1.1e-36 156.8 122 65.6
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 2.4e-36 155.6 122 67.2
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 2.4e-36 155.6 122 65.6
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 3.2e-36 155.2 122 63.1
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 3.2e-36 155.2 121 64.5
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 3.2e-36 155.2 122 67.2
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 5.4e-36 154.5 118 66.9
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 5.4e-36 154.5 122 65.6
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 9.2e-36 153.7 122 64.8
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 1.2e-35 153.3 122 64.8
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.2e-35 153.3 122 64.8
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.2e-35 153.3 122 64.8
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 1.2e-35 153.3 122 68.9
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 1.2e-35 153.3 122 68.9
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 1.2e-35 153.3 122 65.6
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 2.1e-35 152.5 122 68.9
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 2.7e-35 152.1 122 65.6
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 2.7e-35 152.1 125 64.0
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 6.0e-35 151.0 97 78.4
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 1.0e-34 150.2 112 65.2
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 1.0e-34 150.2 122 64.8
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 1.7e-34 149.4 122 63.9
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 2.3e-34 149.1 122 65.6
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 3.0e-34 148.7 119 63.9
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 3.9e-34 148.3 118 66.1
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 5.1e-34 147.9 123 64.2
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 8.6e-34 147.1 87 82.8
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 8.6e-34 147.1 87 82.8
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 8.6e-34 147.1 87 80.5
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 8.6e-34 147.1 122 63.9
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 1.1e-33 146.7 118 65.3
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 1.1e-33 146.7 113 67.3
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 1.5e-33 146.4 129 62.8
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 1.5e-33 146.4 122 63.9
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 1.9e-33 146.0 107 71.0
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 1.9e-33 146.0 122 62.3
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 3.3e-33 145.2 130 58.5
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 4.3e-33 144.8 79 86.1
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 4.3e-33 144.8 97 71.1
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 5.6e-33 144.4 81 84.0
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 9.6e-33 143.7 129 61.2
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 1.2e-32 143.3 122 62.3
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 1.6e-32 142.9 126 62.7
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 1.6e-32 142.9 92 76.1
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 2.1e-32 142.5 79 84.8
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 2.1e-32 142.5 79 84.8
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 2.1e-32 142.5 79 84.8
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 2.1e-32 142.5 79 84.8
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 2.8e-32 142.1 80 82.5
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 2.8e-32 142.1 118 61.9
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 3.6e-32 141.7 90 75.6
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 4.7e-32 141.4 126 62.7
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 4.7e-32 141.4 87 83.9
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 8.1e-32 140.6 107 68.2
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 1.1e-31 140.2 123 58.5
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 1.1e-31 140.2 97 70.1
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 2.4e-31 139.0 79 83.5
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 1.2e-30 136.7 116 62.9
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 2.6e-30 135.6 79 79.7
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 4.4e-30 134.8 79 78.5
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 4.4e-30 134.8 70 90.0
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 5.8e-30 134.4 104 64.4
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 5.8e-30 134.4 78 85.9
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 5.8e-30 134.4 79 78.5
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 7.6e-30 134.0 121 60.3
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 7.6e-30 134.0 121 59.5
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 9.9e-30 133.7 123 56.1
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 1.7e-29 132.9 73 86.3
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 2.2e-29 132.5 74 85.1
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 6.4e-29 131.0 122 57.4
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 6.4e-29 131.0 118 61.0
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 8.4e-29 130.6 81 75.3
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 2.4e-28 129.0 69 84.1
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 4.2e-28 128.3 126 57.9
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 9.3e-28 127.1 113 60.2
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 9.3e-28 127.1 165 43.0
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 3.9e-26 121.7 118 57.6
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 3.3e-25 118.6 76 73.7
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 1.3e-24 116.7 72 79.2
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 9.0e-23 110.5 71 69.0
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 4.4e-22 108.2 70 68.6
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 3.2e-20 102.1 48 95.8
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 4.2e-20 101.7 49 93.9
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 8.7e-18 94.0 58 72.4
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 1.1e-15 87.0 70 57.1
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 3.4e-14 82.0 73 52.1
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 5.6e-09 64.7 65 47.7
MELO3C025961.2 Cucumis melo HOM05D007442 ORTHO05D009284 9.6e-09 63.9 77 51.9
CSS0040675 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 6.2e-08 61.2 74 44.6


User provided reference genes

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