Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold49G18372 Striga asiatica HOM05D006473 ORTHO05D008108 1.1e-69 266.5 136 100.0
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 1.5e-34 149.8 139 61.2
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 6.0e-28 127.9 138 51.4
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 1.3e-27 126.7 138 51.4
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 9.7e-26 120.6 133 55.6
Oeu027256.1 Olea europaea HOM05D006473 ORTHO05D008108 6.9e-24 114.4 110 57.3
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 1.2e-23 113.6 136 50.7
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 1.5e-23 113.2 131 48.9
Cc00_g04870 Coffea canephora HOM05D006473 ORTHO05D008108 4.6e-20 101.7 139 46.0
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 7.9e-20 100.9 133 47.4
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 7.9e-20 100.9 137 46.7
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 6.7e-19 97.8 140 45.7
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 2.8e-17 92.4 95 54.7
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 9.1e-16 87.4 130 42.3
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 1.5e-15 86.7 162 41.4
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 7.7e-15 84.3 158 41.8
Lalb_Chr17g0337141 Lupinus albus HOM05D006473 ORTHO05D008108 1.7e-14 83.2 138 40.6
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 3.8e-14 82.0 135 38.5
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 8.5e-14 80.9 130 39.2
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 1.4e-13 80.1 146 39.7
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 4.2e-13 78.6 147 38.8
Phvul.007G120134 Phaseolus vulgaris HOM05D006473 ORTHO05D008108 5.5e-13 78.2 139 40.3
GSVIVG01015888001 Vitis vinifera HOM05D006473 ORTHO05D008108 5.5e-13 78.2 133 40.6
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 7.2e-13 77.8 130 40.8
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 1.2e-12 77.0 164 34.8
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 1.2e-12 77.0 164 34.8
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 1.2e-12 77.0 139 38.1
PGR031G0759 Punica granatum HOM05D006473 ORTHO05D008108 1.6e-12 76.6 135 40.7
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 2.1e-12 76.3 142 37.3
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 4.7e-12 75.1 128 38.3
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 4.7e-12 75.1 132 38.6
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 7.9e-12 74.3 132 36.4
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 7.9e-12 74.3 135 36.3
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 1.0e-11 73.9 131 42.0
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 1.4e-11 73.6 139 36.7
VMungo0540G0033 Vigna mungo HOM05D006473 ORTHO05D008108 1.4e-11 73.6 129 39.5
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 1.8e-11 73.2 137 38.7
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 1.8e-11 73.2 147 41.5
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 2.3e-11 72.8 141 39.0
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 3.0e-11 72.4 131 38.9
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 3.0e-11 72.4 144 37.5
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 3.0e-11 72.4 136 38.2
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 3.9e-11 72.0 147 36.1
Cpa.g.sc8.265 Carica papaya HOM05D006473 ORTHO05D008108 5.1e-11 71.6 150 39.3
Ca_16320_v3 Cicer arietinum L. HOM05D006473 ORTHO05D008108 6.7e-11 71.2 143 35.7
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 6.7e-11 71.2 145 37.9
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 6.7e-11 71.2 144 39.6
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 8.8e-11 70.9 128 39.8
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 1.1e-10 70.5 147 36.1
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 1.1e-10 70.5 150 38.0
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 1.5e-10 70.1 147 35.4
Ciclev10012907m.g Citrus clementina HOM05D006473 ORTHO05D008108 2.6e-10 69.3 128 41.4
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 2.6e-10 69.3 143 34.3
DCAR_029496 Daucus carota HOM05D006473 ORTHO05D008108 3.3e-10 68.9 162 35.8
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 4.4e-10 68.6 150 37.3
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 5.7e-10 68.2 147 34.7
Hund04387 Selenicereus undatus HOM05D006473 ORTHO05D008108 5.7e-10 68.2 132 37.9
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 7.4e-10 67.8 148 36.5
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea HOM05D006473 ORTHO05D008108 1.7e-09 66.6 132 34.8
BcaC07g37876 Brassica carinata HOM05D006473 ORTHO05D008108 2.2e-09 66.2 132 36.4
BolC8t48269H Brassica oleracea HOM05D006473 ORTHO05D008108 2.2e-09 66.2 132 36.4
Haze_13545 Corylus avellana HOM05D006473 ORTHO05D008108 2.2e-09 66.2 90 43.3
Eucgr.A00949 Eucalyptus grandis HOM05D006473 ORTHO05D008108 2.2e-09 66.2 131 40.5
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 2.2e-09 66.2 151 37.1
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 2.8e-09 65.9 152 35.5
A08p11670 Brassica napus HOM05D006473 ORTHO05D008108 3.7e-09 65.5 132 36.4
BraA08t33161Z Brassica rapa HOM05D006473 ORTHO05D008108 3.7e-09 65.5 132 36.4
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 4.8e-09 65.1 167 33.5
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea HOM05D006473 ORTHO05D008108 4.8e-09 65.1 131 35.1
HanXRQChr02g0035171 Helianthus annuus HOM05D006473 ORTHO05D008108 4.8e-09 65.1 158 36.1
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 4.8e-09 65.1 150 37.3
Sabra16G0000300 Salix brachista HOM05D006473 ORTHO05D008108 4.8e-09 65.1 150 34.0
BcaB04g18284 Brassica carinata HOM05D006473 ORTHO05D008108 6.3e-09 64.7 132 37.9
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 6.3e-09 64.7 143 37.8
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 6.3e-09 64.7 131 34.4
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 8.2e-09 64.3 152 35.5
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 8.2e-09 64.3 152 35.5
Zm00001eb078060 Zea mays HOM05D006473 ORTHO05D008108 8.2e-09 64.3 136 35.3
Cpa.g.sc32.52 Carica papaya HOM05D006473 ORTHO05D008108 1.1e-08 63.9 140 37.1
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 1.1e-08 63.9 143 33.6
unitig_62.g23243 Utricularia gibba HOM05D006473 ORTHO05D008108 1.8e-08 63.2 125 36.0
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 4.1e-08 62.0 124 35.5
Rhsim12G0015400 Rhododendron simsii HOM05D006473 ORTHO05D008108 4.1e-08 62.0 149 35.6
Sp7g13370 Schrenkiella parvula HOM05D006473 ORTHO05D008108 4.1e-08 62.0 134 38.1
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 5.3e-08 61.6 144 37.5
QL10p019398 Quercus lobata HOM05D006473 ORTHO05D008108 7.0e-08 61.2 144 34.7
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 9.1e-08 60.8 139 32.4
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 9.1e-08 60.8 139 34.5
Os04g0504200 Oryza sativa ssp. japonica HOM05D006473 ORTHO05D008108 9.1e-08 60.8 144 33.3
QL07p025679 Quercus lobata HOM05D006473 ORTHO05D008108 9.1e-08 60.8 143 34.3
BcaB02g07838 Brassica carinata HOM05D006473 ORTHO05D008108 2.0e-07 59.7 130 38.5
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 2.0e-07 59.7 132 36.4
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 2.0e-07 59.7 139 40.3
Oeu036758.1 Olea europaea HOM05D006473 ORTHO05D008108 2.0e-07 59.7 64 50.0
QL04p064817 Quercus lobata HOM05D006473 ORTHO05D008108 2.6e-07 59.3 143 36.4
THA.LOC104808506 Tarenaya hassleriana HOM05D006473 ORTHO05D008108 3.4e-07 58.9 130 42.3
CDE05G3197 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 4.5e-07 58.5 129 33.3
PSO675G8005 Papaver somniferum HOM05D006473 ORTHO05D008108 5.9e-07 58.2 140 33.6
ATR0763G071 Amborella trichopoda HOM05D006473 ORTHO05D008108 1.0e-06 57.4 149 33.6
A05p16970 Brassica napus HOM05D006473 ORTHO05D008108 1.0e-06 57.4 141 35.5
C06p16570 Brassica napus HOM05D006473 ORTHO05D008108 1.3e-06 57.0 132 35.6
BolC6t36859H Brassica oleracea HOM05D006473 ORTHO05D008108 1.3e-06 57.0 132 35.6
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 1.3e-06 57.0 78 42.3
BcaC08g44251 Brassica carinata HOM05D006473 ORTHO05D008108 1.7e-06 56.6 132 35.6
QL07p026979 Quercus lobata HOM05D006473 ORTHO05D008108 2.2e-06 56.2 82 43.9
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 2.9e-06 55.8 133 37.6
Thhalv10027487m.g Eutrema salsugineum HOM05D006473 ORTHO05D008108 5.0e-06 55.1 132 35.6
QL07p026949 Quercus lobata HOM05D006473 ORTHO05D008108 5.0e-06 55.1 143 32.9


User provided reference genes

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