Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold49G18363 Striga asiatica HOM05D006530 ORTHO05D008283 3.5e-272 941.0 485 100.0
Migut.H01255 Erythranthe guttata HOM05D006530 ORTHO05D008283 2.6e-134 483.0 589 48.6
MSTRG.14123 Avicennia marina HOM05D006530 ORTHO05D008283 9.4e-132 474.6 639 44.6
SalBow3G0397 Salvia bowleyana HOM05D006530 ORTHO05D008283 2.1e-123 446.8 620 44.2
SalBow1G8616 Salvia bowleyana HOM05D006530 ORTHO05D008283 3.5e-118 429.5 659 41.6
Cfa014298 Carpinus fangiana HOM05D006530 ORTHO05D008283 9.5e-108 394.8 636 39.6
Hma1.2p1_0445F.1_g154110 Hydrangea macrophylla HOM05D006530 ORTHO05D008283 2.6e-105 386.7 617 39.5
Duzib133G1057 Durio zibethinus HOM05D006530 ORTHO05D008283 9.8e-105 384.8 668 37.4
Haze_12746 Corylus avellana HOM05D006530 ORTHO05D008283 1.4e-103 380.9 636 38.2
unitig_26.g9922 Utricularia gibba HOM05D006530 ORTHO05D008283 5.4e-103 379.0 561 42.4
Nitab4.5_0000622g0140 Nicotiana tabacum HOM05D006530 ORTHO05D008283 2.3e-101 373.6 638 37.5
Peaxi162Scf00047g02037 Petunia axillaris HOM05D006530 ORTHO05D008283 2.9e-101 373.2 644 36.3
Thecc.01G184900 Theobroma cacao HOM05D006530 ORTHO05D008283 1.2e-99 367.9 665 36.8
CAN.G931.8 Capsicum annuum HOM05D006530 ORTHO05D008283 2.1e-99 367.1 642 38.9
COL.COLO4_32787 Corchorus olitorius HOM05D006530 ORTHO05D008283 2.1e-99 367.1 652 37.3
Rhsim06G0169800 Rhododendron simsii HOM05D006530 ORTHO05D008283 2.8e-99 366.7 636 38.1
DCAR_019250 Daucus carota HOM05D006530 ORTHO05D008283 1.0e-98 364.8 652 38.0
Sopen12g001950 Solanum pennellii HOM05D006530 ORTHO05D008283 1.0e-98 364.8 633 36.0
PGSC0003DMG400013890 Solanum tuberosum HOM05D006530 ORTHO05D008283 2.3e-98 363.6 632 36.1
Solyc12g005980.2 Solanum lycopersicum HOM05D006530 ORTHO05D008283 4.0e-98 362.8 633 37.1
Cpa.g.sc132.47 Carica papaya HOM05D006530 ORTHO05D008283 6.8e-98 362.1 575 41.4
HanXRQChr16g0508331 Helianthus annuus HOM05D006530 ORTHO05D008283 6.8e-98 362.1 592 38.3
Cc05_g02470 Coffea canephora HOM05D006530 ORTHO05D008283 1.2e-97 361.3 616 37.3
Atru.chr6.3278 Acer truncatum HOM05D006530 ORTHO05D008283 1.7e-96 357.5 681 36.6
Atru.chr6.3294 Acer truncatum HOM05D006530 ORTHO05D008283 1.7e-96 357.5 681 36.6
CSS0049970 Camellia sinensis var. sinensis HOM05D006530 ORTHO05D008283 1.7e-96 357.5 680 37.4
Gorai.001G218200 Gossypium raimondii HOM05D006530 ORTHO05D008283 1.7e-96 357.5 667 36.1
CSS0002282 Camellia sinensis var. sinensis HOM05D006530 ORTHO05D008283 6.4e-96 355.5 685 36.9
Oeu061995.2 Olea europaea HOM05D006530 ORTHO05D008283 8.3e-96 355.1 722 35.7
Gohir.A07G188400 Gossypium hirsutum HOM05D006530 ORTHO05D008283 1.4e-95 354.4 656 36.9
Gohir.D07G195000 Gossypium hirsutum HOM05D006530 ORTHO05D008283 1.9e-95 354.0 667 36.0
Lj1A785T50 Lonicera japonica HOM05D006530 ORTHO05D008283 2.0e-94 350.5 670 36.9
QL08p029933 Quercus lobata HOM05D006530 ORTHO05D008283 4.6e-94 349.4 703 35.3
Glyma.20G058500 Glycine max HOM05D006530 ORTHO05D008283 1.7e-93 347.4 601 36.9
TWI18G1412 Tripterygium wilfordii HOM05D006530 ORTHO05D008283 1.7e-93 347.4 641 36.0
Ciclev10014523m.g Citrus clementina HOM05D006530 ORTHO05D008283 3.9e-93 346.3 653 35.5
MD09G1117000 Malus domestica HOM05D006530 ORTHO05D008283 5.0e-93 345.9 651 37.8
Medtr3g082840 Medicago truncatula HOM05D006530 ORTHO05D008283 5.0e-93 345.9 588 37.2
VMungo0540G0580 Vigna mungo HOM05D006530 ORTHO05D008283 5.0e-93 345.9 548 38.0
FvH4_6g41820 Fragaria vesca HOM05D006530 ORTHO05D008283 6.6e-93 345.5 661 35.4
Phvul.006G013400 Phaseolus vulgaris HOM05D006530 ORTHO05D008283 1.5e-92 344.4 584 37.0
Lj6g0023666 Lotus japonicus HOM05D006530 ORTHO05D008283 2.5e-92 343.6 601 35.6
PSO541G4152 Papaver somniferum HOM05D006530 ORTHO05D008283 2.5e-92 343.6 662 36.1
ECA236G0541 Erigeron canadensis HOM05D006530 ORTHO05D008283 4.3e-92 342.8 626 37.2
Psat5g104000 Pisum sativum HOM05D006530 ORTHO05D008283 5.6e-92 342.4 593 36.6
TAR624G0329 Trochodendron aralioides HOM05D006530 ORTHO05D008283 1.6e-91 340.9 718 34.5
Lalb_Chr08g0236491 Lupinus albus HOM05D006530 ORTHO05D008283 2.8e-91 340.1 612 35.9
Ca_16350_v3 Cicer arietinum L. HOM05D006530 ORTHO05D008283 6.2e-91 339.0 585 35.7
Eucgr.K00730 Eucalyptus grandis HOM05D006530 ORTHO05D008283 6.2e-91 339.0 676 35.8
FAN09G3579 Fragaria x ananassa HOM05D006530 ORTHO05D008283 6.2e-91 339.0 662 35.2
arahy.Tifrunner.gnm1.ann1.KP8KK1 Arachis hypogaea HOM05D006530 ORTHO05D008283 1.1e-90 338.2 591 35.4
arahy.Tifrunner.gnm1.ann1.B2HSRW Arachis hypogaea HOM05D006530 ORTHO05D008283 2.3e-90 337.0 594 35.0
Aqoxy1G02869 Aquilegia oxysepala HOM05D006530 ORTHO05D008283 3.1e-90 336.7 682 35.2
RcHm_v2.0_Chr2g0157621 Rosa chinensis HOM05D006530 ORTHO05D008283 4.0e-90 336.3 661 34.8
Nitab4.5_0005875g0040 Nicotiana tabacum HOM05D006530 ORTHO05D008283 1.2e-89 334.7 627 34.9
CANSAT64G1714 Cannabis sativa HOM05D006530 ORTHO05D008283 7.5e-89 332.0 675 34.2
Prupe.3G206900 Prunus persica HOM05D006530 ORTHO05D008283 2.2e-88 330.5 705 34.9
CARHR217000 Cardamine hirsuta HOM05D006530 ORTHO05D008283 6.4e-88 328.9 573 36.5
AUR62017570 Chenopodium quinoa HOM05D006530 ORTHO05D008283 1.9e-87 327.4 665 33.7
Nn1g03345 Nelumbo nucifera HOM05D006530 ORTHO05D008283 9.2e-87 325.1 719 33.5
Zm00001eb034180 Zea mays HOM05D006530 ORTHO05D008283 1.6e-86 324.3 649 34.7
AUR62015107 Chenopodium quinoa HOM05D006530 ORTHO05D008283 2.1e-86 323.9 666 33.5
Lsat_1_v5_gn_7_94721 Lactuca sativa HOM05D006530 ORTHO05D008283 4.6e-86 322.8 581 36.1
MELO3C019717.2 Cucumis melo HOM05D006530 ORTHO05D008283 1.0e-85 321.6 687 33.5
THA.LOC104808864 Tarenaya hassleriana HOM05D006530 ORTHO05D008283 2.3e-85 320.5 659 33.7
Aa31sc124G40 Aethionema arabicum HOM05D006530 ORTHO05D008283 3.9e-85 319.7 633 34.6
BcaC02g09488 Brassica carinata HOM05D006530 ORTHO05D008283 8.6e-85 318.5 562 37.5
Sp7g06570 Schrenkiella parvula HOM05D006530 ORTHO05D008283 2.5e-84 317.0 592 35.0
AL7G44540 Arabidopsis lyrata HOM05D006530 ORTHO05D008283 5.6e-84 315.8 588 35.7
Os08g0500800 Oryza sativa ssp. japonica HOM05D006530 ORTHO05D008283 5.6e-84 315.8 673 33.6
CsaV3_6G015570 Cucumis sativus L. HOM05D006530 ORTHO05D008283 7.3e-84 315.5 687 32.8
C04p43360 Brassica napus HOM05D006530 ORTHO05D008283 3.6e-83 313.2 562 37.2
BolC4t25914H Brassica oleracea HOM05D006530 ORTHO05D008283 3.6e-83 313.2 562 37.2
AT5G35690 Arabidopsis thaliana HOM05D006530 ORTHO05D008283 4.7e-83 312.8 594 33.8
Potri.014G160400 Populus trichocarpa HOM05D006530 ORTHO05D008283 1.4e-82 311.2 687 33.5
Thhalv10003827m.g Eutrema salsugineum HOM05D006530 ORTHO05D008283 5.2e-82 309.3 589 35.7
Hund24188 Selenicereus undatus HOM05D006530 ORTHO05D008283 2.6e-81 307.0 677 33.1
EL10Ac9g22807 Beta vulgaris HOM05D006530 ORTHO05D008283 2.2e-80 303.9 680 31.5
A04p09880 Brassica napus HOM05D006530 ORTHO05D008283 8.3e-80 302.0 562 36.8
BraA04t16650Z Brassica rapa HOM05D006530 ORTHO05D008283 8.3e-80 302.0 562 36.8
Carub.0007s3142 Capsella rubella HOM05D006530 ORTHO05D008283 1.4e-79 301.2 611 33.6
Sabra14G0122100 Salix brachista HOM05D006530 ORTHO05D008283 1.4e-79 301.2 694 32.9
GSVIVG01030533001 Vitis vinifera HOM05D006530 ORTHO05D008283 1.4e-79 301.2 602 37.0
FAN14G2540 Fragaria x ananassa HOM05D006530 ORTHO05D008283 6.0e-78 295.8 635 33.7
Sc20g0005070 Simmondsia chinensis HOM05D006530 ORTHO05D008283 7.8e-78 295.4 532 36.5
PGR142G2443 Punica granatum HOM05D006530 ORTHO05D008283 3.0e-77 293.5 797 29.7
Manes.12G056700 Manihot esculenta HOM05D006530 ORTHO05D008283 1.5e-76 291.2 789 29.5
vmacro12144 Vaccinium macrocarpon HOM05D006530 ORTHO05D008283 8.1e-75 285.4 763 31.2
Dinv08706 Davidia involucrata HOM05D006530 ORTHO05D008283 1.5e-73 281.2 209 64.1
BcaB06g26968 Brassica carinata HOM05D006530 ORTHO05D008283 4.4e-73 279.6 554 35.0
ATR1128G020 Amborella trichopoda HOM05D006530 ORTHO05D008283 1.1e-71 275.0 767 29.2
CDE10G0969 Ceratophyllum demersum HOM05D006530 ORTHO05D008283 4.2e-71 273.1 761 28.8
HPP92_018405 Vanilla planifolia HOM05D006530 ORTHO05D008283 1.0e-69 268.5 613 32.8
CiPaw.03G274100 Carya illinoinensis HOM05D006530 ORTHO05D008283 2.3e-69 267.3 209 59.8
FAN02G4367 Fragaria x ananassa HOM05D006530 ORTHO05D008283 7.3e-68 262.3 203 61.1
Sed0022132 Sechium edule HOM05D006530 ORTHO05D008283 3.6e-67 260.0 210 60.0
CDE10G0956 Ceratophyllum demersum HOM05D006530 ORTHO05D008283 4.7e-67 259.6 208 58.2
TPR.G22470 Trifolium pratense HOM05D006530 ORTHO05D008283 5.3e-66 256.1 199 58.3
ATR1001G009 Amborella trichopoda HOM05D006530 ORTHO05D008283 3.9e-61 240.0 208 54.8
Pp3c20_8530 Physcomitrium patens HOM05D006530 ORTHO05D008283 4.3e-60 236.5 664 30.0
Actinidia09758 Actinidia chinensis HOM05D006530 ORTHO05D008283 1.3e-59 235.0 651 31.6
SEGI_28144 Sequoiadendron giganteum HOM05D006530 ORTHO05D008283 1.1e-55 221.9 198 57.1
BcaB06g26965 Brassica carinata HOM05D006530 ORTHO05D008283 1.3e-53 214.9 197 54.8
MD17G1108500 Malus domestica HOM05D006530 ORTHO05D008283 1.6e-51 208.0 458 34.3
AagrBONN_evm.TU.Sc2ySwM_228.92 Anthoceros agrestis HOM05D006530 ORTHO05D008283 1.1e-47 195.3 210 49.0
Mapoly0071s0087 Marchantia polymorpha HOM05D006530 ORTHO05D008283 4.6e-46 189.9 196 49.5
FAN03G2558 Fragaria x ananassa HOM05D006530 ORTHO05D008283 3.3e-36 157.1 146 53.4
TPR.G7490 Trifolium pratense HOM05D006530 ORTHO05D008283 5.7e-36 156.4 210 46.2
ClCG02G018190 Citrullus lanatus HOM05D006530 ORTHO05D008283 4.5e-33 146.7 521 27.4
SEGI_11846 Sequoiadendron giganteum HOM05D006530 ORTHO05D008283 6.1e-30 136.3 120 51.7
FAN18G0638 Fragaria x ananassa HOM05D000077 ORTHO05D005545 1.7e-27 128.3 120 51.7
FAN15G1469 Fragaria x ananassa HOM05D006530 ORTHO05D008283 2.2e-27 127.9 117 53.0
FAN27G2805 Fragaria x ananassa HOM05D006530 ORTHO05D008283 2.2e-27 127.9 117 53.0
SGA_v2.0_scaffold112G31585 Striga asiatica HOM05D006530 ORTHO05D008283 8.5e-24 115.9 72 77.8
MCO07G103 Micromonas commoda HOM05D006530 ORTHO05D008283 1.2e-22 112.1 212 34.0
Cre16.g684000 Chlamydomonas reinhardtii HOM05D006530 ORTHO05D008283 2.0e-20 104.8 192 31.8
BcaB06g26964 Brassica carinata HOM05D006530 ORTHO05D008283 3.8e-16 90.5 81 49.4
MBI19_g29441_MAGBIO Magnolia biondii HOM05D006530 ORTHO05D008283 2.9e-08 64.3 128 35.9
A03p41860 Brassica napus HOM05D003344 ORTHO05D003981 6.5e-08 63.2 99 35.4
SHI10236 Sapria himalayana HOM05D006530 ORTHO05D008283 8.5e-08 62.8 71 49.3
SHI10239 Sapria himalayana HOM05D006530 ORTHO05D008283 1.5e-07 62.0 83 37.3
SEGI_05435 Sequoiadendron giganteum HOM05D002747 ORTHO05D003069 1.5e-07 62.0 125 31.2
PGSC0003DMG400026879 Solanum tuberosum HOM05D002747 ORTHO05D003069 2.1e-06 58.2 151 27.8
MELO3C020440.2 Cucumis melo HOM05D002747 ORTHO05D003069 8.0e-06 56.2 112 31.2


User provided reference genes

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