Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold49G18345 Striga asiatica HOM05D002897 ORTHO05D008718 2.4e-142 508.8 261 100.0
SalBow1G3579 Salvia bowleyana HOM05D002897 ORTHO05D008718 5.5e-94 348.2 259 68.0
SalBow1G2496 Salvia bowleyana HOM05D002897 ORTHO05D008718 7.9e-93 344.4 259 67.6
MSTRG.14141 Avicennia marina HOM05D002897 ORTHO05D008718 1.1e-89 334.0 262 69.5
Nn1g07262 Nelumbo nucifera HOM05D002897 ORTHO05D008718 9.3e-86 320.9 260 62.7
Migut.H01234 Erythranthe guttata HOM05D002897 ORTHO05D008718 4.6e-85 318.5 266 61.7
GSVIVG01030483001 Vitis vinifera HOM05D002897 ORTHO05D008718 7.9e-85 317.8 259 61.4
CSS0022002 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 3.9e-84 315.5 259 63.7
Gorai.007G171100 Gossypium raimondii HOM05D002897 ORTHO05D008718 5.1e-84 315.1 259 61.4
Oeu051891.2 Olea europaea HOM05D002897 ORTHO05D008718 8.7e-84 314.3 282 59.6
TAR624G0001 Trochodendron aralioides HOM05D002897 ORTHO05D008718 8.7e-84 314.3 262 61.8
Gohir.D11G160500 Gossypium hirsutum HOM05D002897 ORTHO05D008718 1.5e-83 313.5 259 61.0
Peaxi162Scf00921g00023 Petunia axillaris HOM05D002897 ORTHO05D008718 3.3e-83 312.4 259 62.5
Actinidia09731 Actinidia chinensis HOM05D002897 ORTHO05D008718 5.7e-83 311.6 257 62.3
Cfa014332 Carpinus fangiana HOM05D002897 ORTHO05D008718 7.4e-83 311.2 259 61.0
Solyc07g049200.4 Solanum lycopersicum HOM05D002897 ORTHO05D008718 1.6e-82 310.1 259 63.3
Cpa.g.sc132.3 Carica papaya HOM05D002897 ORTHO05D008718 3.7e-82 308.9 259 62.5
Duzib138G1172 Durio zibethinus HOM05D002897 ORTHO05D008718 6.3e-82 308.1 254 61.8
Prupe.3G212700 Prunus persica HOM05D002897 ORTHO05D008718 8.2e-82 307.8 260 61.2
Sopen07g025210 Solanum pennellii HOM05D002897 ORTHO05D008718 2.4e-81 306.2 259 62.2
PGSC0003DMG400000696 Solanum tuberosum HOM05D002897 ORTHO05D008718 3.1e-81 305.8 259 62.5
FAN05G4893 Fragaria x ananassa HOM05D002897 ORTHO05D008718 4.1e-81 305.4 260 61.2
FAN02G2770 Fragaria x ananassa HOM05D002897 ORTHO05D008718 1.2e-80 303.9 260 61.2
Hma1.2p1_2044F.1_g312350 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 1.2e-80 303.9 261 61.3
CiPaw.03G157200 Carya illinoinensis HOM05D002897 ORTHO05D008718 1.5e-80 303.5 259 57.5
FvH4_6g42620 Fragaria vesca HOM05D002897 ORTHO05D008718 1.5e-80 303.5 260 61.2
Gohir.A11G153700 Gossypium hirsutum HOM05D002897 ORTHO05D008718 1.5e-80 303.5 259 59.1
RcHm_v2.0_Chr2g0158471 Rosa chinensis HOM05D002897 ORTHO05D008718 1.0e-79 300.8 260 61.9
Thecc.01G180000 Theobroma cacao HOM05D002897 ORTHO05D008718 1.0e-79 300.8 259 59.8
Rhsim06G0166000 Rhododendron simsii HOM05D002897 ORTHO05D008718 1.7e-79 300.1 269 58.4
QL08p031170 Quercus lobata HOM05D002897 ORTHO05D008718 2.2e-79 299.7 260 57.3
Manes.13G067751 Manihot esculenta HOM05D002897 ORTHO05D008718 5.0e-79 298.5 259 59.5
vmacro12177 Vaccinium macrocarpon HOM05D002897 ORTHO05D008718 6.5e-79 298.1 257 59.9
Manes.13G067750 Manihot esculenta HOM05D002897 ORTHO05D008718 8.5e-79 297.7 259 59.5
Haze_12787 Corylus avellana HOM05D002897 ORTHO05D008718 1.1e-78 297.4 279 55.6
Ciclev10016301m.g Citrus clementina HOM05D002897 ORTHO05D008718 2.5e-78 296.2 264 57.6
Nitab4.5_0012091g0010 Nicotiana tabacum HOM05D002897 ORTHO05D008718 5.5e-78 295.0 258 60.9
Atru.chr6.3235 Acer truncatum HOM05D002897 ORTHO05D008718 1.2e-77 293.9 259 59.8
Potri.014G156700 Populus trichocarpa HOM05D002897 ORTHO05D008718 1.2e-77 293.9 260 58.5
Cc05_g03270 Coffea canephora HOM05D002897 ORTHO05D008718 1.6e-77 293.5 257 59.1
Dinv39736 Davidia involucrata HOM05D002897 ORTHO05D008718 1.4e-76 290.4 259 60.6
Lsat_1_v5_gn_5_123640 Lactuca sativa HOM05D002897 ORTHO05D008718 1.4e-76 290.4 261 57.1
TWI18G1283 Tripterygium wilfordii HOM05D002897 ORTHO05D008718 1.8e-76 290.0 262 58.4
Sc06g0009610 Simmondsia chinensis HOM05D002897 ORTHO05D008718 2.3e-76 289.7 260 56.5
Sed0013072 Sechium edule HOM05D002897 ORTHO05D008718 3.0e-76 289.3 258 59.7
ClCG02G002140 Citrullus lanatus HOM05D002897 ORTHO05D008718 5.1e-76 288.5 259 59.1
Sabra14G0118500 Salix brachista HOM05D002897 ORTHO05D008718 5.1e-76 288.5 260 58.1
ECA234G1553 Erigeron canadensis HOM05D002897 ORTHO05D008718 6.7e-76 288.1 261 60.2
HanXRQChr12g0373611 Helianthus annuus HOM05D002897 ORTHO05D008718 1.1e-75 287.3 261 59.4
Nitab4.5_0000482g0070 Nicotiana tabacum HOM05D002897 ORTHO05D008718 1.7e-74 283.5 261 59.8
MELO3C018838.2 Cucumis melo HOM05D002897 ORTHO05D008718 2.2e-74 283.1 258 57.0
THA.LOC104826141 Tarenaya hassleriana HOM05D002897 ORTHO05D008718 1.4e-73 280.4 258 56.6
Aqoxy1G03476 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 1.5e-72 276.9 264 58.0
Eucgr.A01101 Eucalyptus grandis HOM05D002897 ORTHO05D008718 3.4e-72 275.8 264 52.7
AUR62035641 Chenopodium quinoa HOM05D002897 ORTHO05D008718 1.0e-71 274.2 260 55.0
CsaV3_7G003360 Cucumis sativus L. HOM05D002897 ORTHO05D008718 2.2e-71 273.1 258 55.8
Hma1.2p1_1986F.1_g310090 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 2.9e-71 272.7 205 65.9
arahy.Tifrunner.gnm1.ann1.QRVI7E Arachis hypogaea HOM05D002897 ORTHO05D008718 3.8e-71 272.3 264 54.9
Lj8C128G4 Lonicera japonica HOM05D002897 ORTHO05D008718 1.4e-70 270.4 262 56.9
arahy.Tifrunner.gnm1.ann1.YEZ88R Arachis hypogaea HOM05D002897 ORTHO05D008718 4.2e-70 268.9 264 54.2
AL1G14810 Arabidopsis lyrata HOM05D002897 ORTHO05D008718 7.2e-70 268.1 262 54.6
Thhalv10008572m.g Eutrema salsugineum HOM05D002897 ORTHO05D008718 9.4e-70 267.7 261 54.0
Glyma.14G046500 Glycine max HOM05D002897 ORTHO05D008718 1.6e-69 266.9 257 57.2
VMungo0647G1784 Vigna mungo HOM05D002897 ORTHO05D008718 1.6e-69 266.9 259 56.4
AT1G05060 Arabidopsis thaliana HOM05D002897 ORTHO05D008718 2.1e-69 266.5 262 54.6
Phvul.008G211400 Phaseolus vulgaris HOM05D002897 ORTHO05D008718 2.7e-69 266.2 259 55.2
Sp1g03930 Schrenkiella parvula HOM05D002897 ORTHO05D008718 3.6e-69 265.8 260 54.6
Ca_06120_v3 Cicer arietinum L. HOM05D002897 ORTHO05D008718 6.1e-69 265.0 258 54.3
Glyma.02G270500 Glycine max HOM05D002897 ORTHO05D008718 6.1e-69 265.0 263 54.0
Carub.0001s0433 Capsella rubella HOM05D002897 ORTHO05D008718 1.8e-68 263.5 260 53.1
TPR.G14446 Trifolium pratense HOM05D002897 ORTHO05D008718 1.8e-68 263.5 260 54.6
Medtr5g085980 Medicago truncatula HOM05D002897 ORTHO05D008718 5.1e-68 261.9 257 53.3
EL10Ac4g07512 Beta vulgaris HOM05D002897 ORTHO05D008718 8.8e-68 261.2 265 52.1
BraA09t38920Z Brassica rapa HOM05D002897 ORTHO05D008718 2.0e-67 260.0 259 53.7
CDE07G0516 Ceratophyllum demersum HOM05D002897 ORTHO05D008718 3.3e-67 259.2 259 52.1
BcaC05g27288 Brassica carinata HOM05D002897 ORTHO05D008718 9.7e-67 257.7 259 52.9
Lalb_Chr04g0249891 Lupinus albus HOM05D002897 ORTHO05D008718 9.7e-67 257.7 259 52.5
BcaB07g32946 Brassica carinata HOM05D002897 ORTHO05D008718 1.3e-66 257.3 259 52.5
MBI19_g24999_MAGBIO Magnolia biondii HOM05D002897 ORTHO05D008718 2.2e-66 256.5 261 57.1
BolC5t31920H Brassica oleracea HOM05D002897 ORTHO05D008718 3.7e-66 255.8 259 52.9
AUR62017163 Chenopodium quinoa HOM05D002897 ORTHO05D008718 4.8e-66 255.4 252 53.2
Aqoxy1G03469 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 5.3e-65 251.9 262 53.8
CARHR004510 Cardamine hirsuta HOM05D002897 ORTHO05D008718 2.6e-64 249.6 269 50.2
Psat4g114440 Pisum sativum HOM05D002897 ORTHO05D008718 2.6e-64 249.6 260 50.8
A09p33710 Brassica napus HOM05D002897 ORTHO05D008718 2.9e-63 246.1 284 48.9
MD17G1102200 Malus domestica HOM05D002897 ORTHO05D008718 5.0e-63 245.4 216 61.1
LjContig00564g0002899 Lotus japonicus HOM05D002897 ORTHO05D008718 7.2e-62 241.5 261 51.7
C05p31940 Brassica napus HOM05D002897 ORTHO05D008718 9.4e-62 241.1 284 48.2
PSO210G2604 Papaver somniferum HOM05D002897 ORTHO05D008718 3.7e-58 229.2 260 47.3
DCAR_012931 Daucus carota HOM05D002897 ORTHO05D008718 9.1e-57 224.6 261 47.5
FAN14G2576 Fragaria x ananassa HOM05D002897 ORTHO05D008718 1.2e-56 224.2 260 51.5
Os06g0239700 Oryza sativa ssp. japonica HOM05D002897 ORTHO05D008718 2.7e-56 223.0 265 47.2
Zm00001eb280010 Zea mays HOM05D002897 ORTHO05D008718 3.5e-56 222.6 259 48.3
Hma1.2p1_2044F.1_g312360 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 3.2e-54 216.1 197 59.4
Aa31LG1G19710 Aethionema arabicum HOM05D002897 ORTHO05D008718 7.2e-54 214.9 307 41.4
unitig_21.g21003 Utricularia gibba HOM05D002897 ORTHO05D008718 2.6e-51 206.5 162 62.3
HPP92_017354 Vanilla planifolia HOM05D002897 ORTHO05D008718 1.8e-49 200.3 255 45.5
SEGI_41028 Sequoiadendron giganteum HOM05D002897 ORTHO05D008718 2.0e-40 170.2 247 38.1
COL.COLO4_21853 Corchorus olitorius HOM05D002897 ORTHO05D008718 7.7e-40 168.3 164 56.1
CSS0034853 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 1.7e-39 167.2 171 53.8
Pp3c23_20260 Physcomitrium patens HOM05D002897 ORTHO05D008718 8.3e-34 148.3 246 37.4
AagrBONN_evm.TU.Sc2ySwM_117.2821 Anthoceros agrestis HOM05D002897 ORTHO05D008718 5.2e-28 129.0 246 36.2
ATR0059G011 Amborella trichopoda HOM05D002897 ORTHO05D008718 1.7e-23 114.0 153 45.8
MD06G1049400 Malus domestica HOM05D002897 ORTHO05D008718 1.5e-19 100.9 131 48.9
ATR0059G040 Amborella trichopoda HOM05D002897 ORTHO05D008718 3.7e-18 96.3 95 49.5
CANSAT64G1786 Cannabis sativa HOM05D002897 ORTHO05D008718 6.6e-15 85.5 59 62.7
SMO356G0703 Selaginella moellendorffii HOM05D013342 ORTHO05D008718 3.1e-12 76.6 225 30.7
Aa31sc72G10 Aethionema arabicum HOM05D002897 ORTHO05D008718 5.4e-09 65.9 114 36.8
BolC6t39233H Brassica oleracea HOM05D002897 ORTHO05D008718 1.9e-06 57.4 45 53.3


User provided reference genes

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