Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold49G18329 Striga asiatica HOM05D007783 ORTHO05D009740 5.4e-36 154.8 159 100.0
MSTRG.12290 Avicennia marina HOM05D007783 ORTHO05D009740 2.4e-12 76.3 60 65.0
Migut.H01214 Erythranthe guttata HOM05D007783 ORTHO05D009740 9.3e-12 74.3 60 65.0
Gohir.D12G138800 Gossypium hirsutum HOM05D007783 ORTHO05D009740 6.0e-11 71.6 57 63.2
Gorai.008G150200 Gossypium raimondii HOM05D007783 ORTHO05D009740 6.0e-11 71.6 57 63.2
Oeu041963.1 Olea europaea HOM05D007783 ORTHO05D009740 7.9e-11 71.2 60 61.7
Gohir.A12G135100 Gossypium hirsutum HOM05D007783 ORTHO05D009740 2.3e-10 69.7 57 61.4
TWI36G1428 Tripterygium wilfordii HOM05D007783 ORTHO05D009740 3.0e-10 69.3 60 61.7
RcHm_v2.0_Chr2g0160271 Rosa chinensis HOM05D007783 ORTHO05D009740 6.6e-10 68.2 54 59.3
FAN05G3706 Fragaria x ananassa HOM05D007783 ORTHO05D009740 8.7e-10 67.8 71 53.5
FAN14G2245 Fragaria x ananassa HOM05D007783 ORTHO05D009740 8.7e-10 67.8 60 56.7
FAN09G3630 Fragaria x ananassa HOM05D007783 ORTHO05D009740 1.1e-09 67.4 58 60.3
TWI18G0657 Tripterygium wilfordii HOM05D007783 ORTHO05D009740 1.5e-09 67.0 56 64.3
FvH4_6g43650 Fragaria vesca HOM05D007783 ORTHO05D009740 1.9e-09 66.6 60 56.7
Gohir.D04G147200 Gossypium hirsutum HOM05D007783 ORTHO05D009740 2.5e-09 66.2 55 65.5
Gorai.012G133100 Gossypium raimondii HOM05D007783 ORTHO05D009740 2.5e-09 66.2 55 65.5
Gohir.A04G107200 Gossypium hirsutum HOM05D007783 ORTHO05D009740 3.3e-09 65.9 55 65.5
COL.COLO4_13003 Corchorus olitorius HOM05D007783 ORTHO05D009740 4.3e-09 65.5 57 64.9
Rhsim06G0156700 Rhododendron simsii HOM05D000213 ORTHO05D009740 5.6e-09 65.1 60 60.0
Glyma.13G305400 Glycine max HOM05D007783 ORTHO05D009740 1.3e-08 63.9 55 63.6
Cc00_g19250 Coffea canephora HOM05D007783 ORTHO05D009740 2.8e-08 62.8 57 50.9
Actinidia30505 Actinidia chinensis HOM05D007783 ORTHO05D009740 3.6e-08 62.4 55 61.8
VMungo1080G1091 Vigna mungo HOM05D007783 ORTHO05D009740 4.8e-08 62.0 55 61.8
Lsat_1_v5_gn_8_129821 Lactuca sativa HOM05D007783 ORTHO05D009740 6.2e-08 61.6 64 48.4
Oeu011075.1 Olea europaea HOM05D007783 ORTHO05D009740 6.2e-08 61.6 55 58.2
Solyc07g052680.1 Solanum lycopersicum HOM05D007783 ORTHO05D009740 8.1e-08 61.2 59 55.9
Sopen07g026300 Solanum pennellii HOM05D007783 ORTHO05D009740 8.1e-08 61.2 59 55.9
PGSC0003DMG400026167 Solanum tuberosum HOM05D007783 ORTHO05D009740 8.1e-08 61.2 59 55.9
Thecc.02G163100 Theobroma cacao HOM05D007783 ORTHO05D009740 8.1e-08 61.2 55 58.2
CANSAT64G1524 Cannabis sativa HOM05D007783 ORTHO05D009740 1.1e-07 60.8 58 58.6
Dinv10909 Davidia involucrata HOM05D007783 ORTHO05D009740 1.4e-07 60.5 55 58.2
Ciclev10017097m.g Citrus clementina HOM05D007783 ORTHO05D009740 1.8e-07 60.1 64 56.2
HanXRQChr17g0563901 Helianthus annuus HOM05D007783 ORTHO05D009740 2.4e-07 59.7 56 50.0
QL08p033993 Quercus lobata HOM05D007783 ORTHO05D009740 2.4e-07 59.7 63 54.0
Manes.07G029300 Manihot esculenta HOM05D007783 ORTHO05D009740 5.3e-07 58.5 59 54.2
Sed0000870 Sechium edule HOM05D007783 ORTHO05D009740 5.3e-07 58.5 55 58.2
Phvul.005G112200 Phaseolus vulgaris HOM05D007783 ORTHO05D009740 6.9e-07 58.2 55 60.0
Ca_01568_v3 Cicer arietinum L. HOM05D007783 ORTHO05D009740 1.2e-06 57.4 54 55.6
Lsat_1_v5_gn_3_43341 Lactuca sativa HOM05D007783 ORTHO05D009740 1.2e-06 57.4 62 46.8
Manes.10G111600 Manihot esculenta HOM05D007783 ORTHO05D009740 1.2e-06 57.4 59 52.5
Cfa014450 Carpinus fangiana HOM05D007783 ORTHO05D009740 1.5e-06 57.0 59 54.2
Sed0005014 Sechium edule HOM05D007783 ORTHO05D009740 1.5e-06 57.0 55 58.2
CiPaw.03G163700 Carya illinoinensis HOM05D007783 ORTHO05D009740 2.0e-06 56.6 56 57.1
Lj3g0010205 Lotus japonicus HOM05D007783 ORTHO05D009740 2.0e-06 56.6 57 50.9
Nitab4.5_0017430g0010 Nicotiana tabacum HOM05D007783 ORTHO05D009740 2.6e-06 56.2 63 50.8
VMungo0331G0946 Vigna mungo HOM05D007783 ORTHO05D009740 2.6e-06 56.2 55 58.2
Cfa014449 Carpinus fangiana HOM05D007783 ORTHO05D009740 3.4e-06 55.8 70 51.4
ClCG02G001700 Citrullus lanatus HOM05D000001 ORTHO05D000003 3.4e-06 55.8 55 54.5
Nn1g06962 Nelumbo nucifera HOM05D007783 ORTHO05D009740 4.5e-06 55.5 54 53.7
CSS0007715 Camellia sinensis var. sinensis HOM05D007783 ORTHO05D009740 5.8e-06 55.1 51 62.7
Medtr2g089010 Medicago truncatula HOM05D007783 ORTHO05D009740 5.8e-06 55.1 58 53.4
Nitab4.5_0002949g0070 Nicotiana tabacum HOM05D007783 ORTHO05D009740 7.6e-06 54.7 63 49.2
CiPaw.04G118600 Carya illinoinensis HOM05D007783 ORTHO05D009740 9.9e-06 54.3 45 57.8
Peaxi162Scf00007g01310 Petunia axillaris HOM05D007783 ORTHO05D009740 9.9e-06 54.3 62 51.6


User provided reference genes

Program Settings