Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold49G18326 Striga asiatica HOM05D030099 ORTHO05D031640 5.8e-77 290.8 147 100.0
MSTRG.14157 Avicennia marina HOM05D030099 ORTHO05D031640 1.2e-24 117.1 99 66.7
Oeu058849.1 Olea europaea HOM05D000042 ORTHO05D000028 2.2e-23 112.8 166 44.6
Migut.H01211 Erythranthe guttata HOM05D001837 ORTHO05D000028 2.3e-20 102.8 139 48.2
MSTRG.12292 Avicennia marina HOM05D030099 ORTHO05D031640 9.5e-19 97.4 83 63.9
Actinidia24276 Actinidia chinensis HOM05D000042 ORTHO05D000028 1.6e-18 96.7 162 38.9
Rhsim06G0156500 Rhododendron simsii HOM05D000042 ORTHO05D000028 2.3e-17 92.8 125 43.2
QL08p034059 Quercus lobata HOM05D000042 ORTHO05D000028 4.9e-15 85.1 162 36.4
CSS0024802 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000028 6.3e-15 84.7 120 41.7
Nitab4.5_0004036g0060 Nicotiana tabacum HOM05D000042 ORTHO05D013283 2.1e-10 69.7 91 48.4
PGSC0003DMG400045842 Solanum tuberosum HOM05D001837 ORTHO05D013283 2.3e-09 66.2 66 48.5
Thecc.02G163400 Theobroma cacao HOM05D014263 ORTHO05D015616 8.9e-09 64.3 126 31.7
Sopen06g014530 Solanum pennellii HOM05D004532 ORTHO05D013283 7.5e-08 61.2 66 48.5
Peaxi162Scf00007g01333 Petunia axillaris HOM05D000042 ORTHO05D013283 9.8e-08 60.8 64 46.9
Solyc06g048380.3 Solanum lycopersicum HOM05D001837 ORTHO05D013283 9.8e-08 60.8 66 48.5
Sopen07g026340 Solanum pennellii HOM05D001837 ORTHO05D013283 1.3e-07 60.5 58 50.0
Cpa.g.sc8.249 Carica papaya HOM05D000042 ORTHO05D013283 3.7e-07 58.9 138 29.7
Duzib248G1072 Durio zibethinus HOM05D014263 ORTHO05D015616 4.1e-06 55.5 179 23.5
PGSC0003DMG401026197 Solanum tuberosum HOM05D000042 ORTHO05D013283 5.4e-06 55.1 65 47.7


User provided reference genes

Program Settings