Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold49G18304 Striga asiatica HOM05D006426 ORTHO05D007737 5.1e-244 847.4 465 100.0
MSTRG.14180 Avicennia marina HOM05D006426 ORTHO05D007737 1.1e-102 377.9 493 52.9
Migut.H01020 Erythranthe guttata HOM05D006426 ORTHO05D007737 1.6e-96 357.5 496 52.8
Nitab4.5_0001871g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 2.2e-90 337.0 495 49.9
CAN.G508.22 Capsicum annuum HOM05D006426 ORTHO05D007737 4.7e-88 329.3 491 51.5
PGSC0003DMG400018371 Solanum tuberosum HOM05D006426 ORTHO05D007737 6.1e-88 328.9 501 49.9
Sopen07g028590 Solanum pennellii HOM05D006426 ORTHO05D007737 1.3e-85 321.2 501 48.9
Solyc07g054690.1 Solanum lycopersicum HOM05D006426 ORTHO05D007737 1.7e-85 320.9 501 48.9
Nitab4.5_0002370g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 1.0e-82 311.6 496 48.0
Dinv15495 Davidia involucrata HOM05D006426 ORTHO05D007737 2.9e-82 310.1 502 48.4
Peaxi162Scf00007g00272 Petunia axillaris HOM05D006426 ORTHO05D007737 1.9e-81 307.4 496 48.2
SalBow1G4632 Salvia bowleyana HOM05D006426 ORTHO05D007737 2.7e-80 303.5 477 51.6
Cc05_g06260 Coffea canephora HOM05D006426 ORTHO05D007737 4.7e-80 302.8 500 47.2
Oeu025481.1 Olea europaea HOM05D006426 ORTHO05D007737 9.2e-76 288.5 529 44.8
Hma1.2p1_0565F.1_g179550 Hydrangea macrophylla HOM05D006426 ORTHO05D007737 1.7e-74 284.3 483 47.4
Actinidia12458 Actinidia chinensis HOM05D006426 ORTHO05D007737 3.8e-74 283.1 487 44.8
Cfa014544 Carpinus fangiana HOM05D006426 ORTHO05D007737 5.0e-74 282.7 492 43.5
Oeu018075.1 Olea europaea HOM05D006426 ORTHO05D007737 7.3e-73 278.9 516 43.4
Haze_13087 Corylus avellana HOM05D006426 ORTHO05D007737 2.1e-72 277.3 498 43.2
TWI36G1326 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 4.7e-72 276.2 506 44.5
SGA_v2.0_scaffold159G37625 Striga asiatica HOM05D006426 ORTHO05D007737 6.1e-72 275.8 443 49.2
TWI18G0136 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 1.4e-71 274.6 495 44.6
QL08p037311 Quercus lobata HOM05D006426 ORTHO05D007737 8.9e-71 271.9 506 41.7
Rhsim06G0152100 Rhododendron simsii HOM05D006426 ORTHO05D007737 3.4e-70 270.0 509 44.0
TWI75G1119 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 3.4e-70 270.0 504 44.6
Actinidia09902 Actinidia chinensis HOM05D006426 ORTHO05D007737 1.7e-69 267.7 467 44.5
Ciclev10015289m.g Citrus clementina HOM05D006426 ORTHO05D007737 2.2e-69 267.3 489 42.7
Thecc.02G171600 Theobroma cacao HOM05D006426 ORTHO05D007737 1.6e-67 261.2 504 40.9
MD17G1084500 Malus domestica HOM05D006426 ORTHO05D007737 5.9e-67 259.2 503 41.4
unitig_52.g17339 Utricularia gibba HOM05D006426 ORTHO05D007737 7.8e-67 258.8 476 43.1
CiPaw.04G122700 Carya illinoinensis HOM05D006426 ORTHO05D007737 2.3e-66 257.3 499 40.3
Prupe.3G231100 Prunus persica HOM05D006426 ORTHO05D007737 2.3e-66 257.3 500 40.6
MD09G1096400 Malus domestica HOM05D006426 ORTHO05D007737 3.9e-66 256.5 502 40.8
Manes.13G151600 Manihot esculenta HOM05D006426 ORTHO05D007737 8.6e-66 255.4 481 40.1
Potri.013G147500 Populus trichocarpa HOM05D006426 ORTHO05D007737 8.6e-66 255.4 484 41.3
Cpa.g.sc34.90 Carica papaya HOM05D006426 ORTHO05D007737 1.9e-65 254.2 500 40.0
FAN02G4384 Fragaria x ananassa HOM05D006426 ORTHO05D007737 3.6e-64 250.0 498 39.0
FAN09G0359 Fragaria x ananassa HOM05D006426 ORTHO05D007737 3.6e-64 250.0 499 39.9
FvH4_6g44570 Fragaria vesca HOM05D006426 ORTHO05D007737 6.2e-64 249.2 500 39.0
Sabra13G0119100 Salix brachista HOM05D006426 ORTHO05D007737 8.0e-64 248.8 486 40.5
Potri.019G116200 Populus trichocarpa HOM05D006426 ORTHO05D007737 1.4e-63 248.1 486 41.2
FAN14G1414 Fragaria x ananassa HOM05D006426 ORTHO05D007737 1.8e-63 247.7 498 38.8
COL.COLO4_13683 Corchorus olitorius HOM05D006426 ORTHO05D007737 1.5e-62 244.6 507 40.2
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 4.4e-62 243.0 502 41.8
Gorai.005G205500 Gossypium raimondii HOM05D006426 ORTHO05D007737 5.8e-62 242.7 503 38.8
Duzib248G1395 Durio zibethinus HOM05D006426 ORTHO05D007737 7.5e-62 242.3 483 40.2
RcHm_v2.0_Chr2g0161781 Rosa chinensis HOM05D006426 ORTHO05D007737 7.5e-62 242.3 501 38.7
Gohir.D02G183100 Gossypium hirsutum HOM05D006426 ORTHO05D007737 9.8e-62 241.9 502 38.6
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 2.9e-61 240.4 498 42.4
Manes.12G083000 Manihot esculenta HOM05D006426 ORTHO05D007737 2.9e-61 240.4 482 39.6
Gohir.A03G160000 Gossypium hirsutum HOM05D006426 ORTHO05D007737 4.9e-61 239.6 503 38.0
TAR627G1051 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.4e-60 238.0 491 39.9
EL10Ac9g20938 Beta vulgaris HOM05D006426 ORTHO05D007737 5.4e-60 236.1 504 40.3
Nn1g03877 Nelumbo nucifera HOM05D006426 ORTHO05D007737 7.0e-60 235.7 500 38.8
Sabra19G0136500 Salix brachista HOM05D006426 ORTHO05D007737 7.0e-60 235.7 491 41.1
Sabra19G0117200 Salix brachista HOM05D006426 ORTHO05D007737 2.0e-59 234.2 487 40.7
Duzib132G0414 Durio zibethinus HOM05D006426 ORTHO05D007737 2.3e-58 230.7 490 39.0
Thhalv10025277m.g Eutrema salsugineum HOM05D006426 ORTHO05D007737 1.6e-56 224.6 485 39.0
TAR626G1919 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.6e-56 224.6 478 37.4
THA.LOC104804065 Tarenaya hassleriana HOM05D006426 ORTHO05D007737 8.1e-56 222.2 471 38.9
Lj8P117T60 Lonicera japonica HOM05D006426 ORTHO05D007737 1.5e-54 218.0 346 44.5
PGR042G3565 Punica granatum HOM05D006426 ORTHO05D007737 3.4e-54 216.9 500 38.0
DCAR_009725 Daucus carota HOM05D006426 ORTHO05D007737 1.3e-53 214.9 496 39.1
CARHR235940 Cardamine hirsuta HOM05D006426 ORTHO05D007737 1.7e-53 214.5 478 36.8
AL7G24370 Arabidopsis lyrata HOM05D006426 ORTHO05D007737 9.2e-52 208.8 477 36.3
Carub.0007s1253 Capsella rubella HOM05D006426 ORTHO05D007737 9.2e-52 208.8 477 37.1
Aa31LG2G22090 Aethionema arabicum HOM05D006426 ORTHO05D007737 4.6e-51 206.5 446 39.5
Sc06g0009150 Simmondsia chinensis HOM05D006426 ORTHO05D007737 6.0e-51 206.1 475 38.5
Sp7g26190 Schrenkiella parvula HOM05D006426 ORTHO05D007737 1.0e-50 205.3 481 38.0
BcaNung01587 Brassica carinata HOM05D006426 ORTHO05D007737 2.3e-50 204.1 473 39.3
AT4G28230 Arabidopsis thaliana HOM05D006426 ORTHO05D007737 6.6e-50 202.6 478 36.4
arahy.Tifrunner.gnm1.ann1.512YGT Arachis hypogaea HOM05D006426 ORTHO05D007737 1.5e-49 201.4 511 35.6
arahy.Tifrunner.gnm1.ann1.2866YZ Arachis hypogaea HOM05D006426 ORTHO05D007737 2.5e-49 200.7 512 35.4
A01p19640 Brassica napus HOM05D006426 ORTHO05D007737 4.3e-49 199.9 457 39.6
ClCG02G017320 Citrullus lanatus HOM05D006426 ORTHO05D007737 4.3e-49 199.9 490 36.7
MELO3C013535.2 Cucumis melo HOM05D006426 ORTHO05D007737 7.3e-49 199.1 484 38.6
Eucgr.A01776 Eucalyptus grandis HOM05D006426 ORTHO05D007737 7.3e-49 199.1 399 38.1
Sed0007067 Sechium edule HOM05D006426 ORTHO05D007737 2.1e-48 197.6 479 37.2
BraA01t01897Z Brassica rapa HOM05D006426 ORTHO05D007737 8.9e-47 192.2 456 37.9
CsaV3_6G012420 Cucumis sativus L. HOM05D006426 ORTHO05D007737 1.2e-46 191.8 492 36.6
Aqoxy1G03895 Aquilegia oxysepala HOM05D006426 ORTHO05D007737 2.0e-46 191.0 530 36.0
TAR629G2656 Trochodendron aralioides HOM05D006426 ORTHO05D007737 9.2e-44 182.2 456 36.4
PSO832G1174 Papaver somniferum HOM05D006426 ORTHO05D007737 1.6e-43 181.4 472 36.0
DCAR_012977 Daucus carota HOM05D006426 ORTHO05D007737 2.7e-43 180.6 467 36.0
BolC1t02416H Brassica oleracea HOM05D006426 ORTHO05D007737 4.6e-43 179.9 459 37.0
C01p24670 Brassica napus HOM05D006426 ORTHO05D007737 1.0e-42 178.7 459 36.8
PSO210G4394 Papaver somniferum HOM05D006426 ORTHO05D007737 1.7e-42 177.9 476 36.3
HanXRQChr15g0488091 Helianthus annuus HOM05D006426 ORTHO05D007737 2.3e-42 177.6 448 36.4
Lalb_Chr01g0017281 Lupinus albus HOM05D006426 ORTHO05D007737 8.6e-42 175.6 385 37.7
BcaC09g50504 Brassica carinata HOM05D006426 ORTHO05D007737 1.5e-41 174.9 459 36.6
PSO675G8522 Papaver somniferum HOM05D006426 ORTHO05D007737 3.3e-41 173.7 505 38.4
PSO541G1576 Papaver somniferum HOM05D006426 ORTHO05D007737 3.6e-40 170.2 504 37.7
Lj3g0000273 Lotus japonicus HOM05D006426 ORTHO05D007737 4.7e-40 169.9 490 33.3
MBI18_g45419_MAGBIO Magnolia biondii HOM05D006426 ORTHO05D007737 4.7e-40 169.9 486 37.7
Atru.chr6.3076 Acer truncatum HOM05D006426 ORTHO05D007737 2.6e-38 164.1 333 40.8
ECA232G2383 Erigeron canadensis HOM05D006426 ORTHO05D007737 1.1e-36 158.7 495 31.9
Lsat_1_v5_gn_4_69460 Lactuca sativa HOM05D006426 ORTHO05D007737 1.1e-36 158.7 482 33.8
VMungo1080G0900 Vigna mungo HOM05D006426 ORTHO05D007737 2.4e-36 157.5 464 33.0
Phvul.005G017100 Phaseolus vulgaris HOM05D006426 ORTHO05D007737 7.1e-36 156.0 461 31.9
Glyma.04G132700 Glycine max HOM05D006426 ORTHO05D007737 5.1e-34 149.8 458 31.4
Glyma.11G158800 Glycine max HOM05D006426 ORTHO05D007737 7.3e-33 146.0 464 32.5
Medtr3g013540 Medicago truncatula HOM05D006426 ORTHO05D007737 6.4e-29 132.9 397 34.5
Psat5g223040 Pisum sativum HOM05D006426 ORTHO05D007737 7.1e-28 129.4 376 35.9
SGA_v2.0_scaffold51G18895 Striga asiatica HOM05D001803 ORTHO05D001686 3.6e-24 117.1 151 53.0
Lj1P736T39 Lonicera japonica HOM05D006426 ORTHO05D007737 6.2e-24 116.3 171 45.0
Sed0009175 Sechium edule HOM05D006426 ORTHO05D007737 8.1e-24 115.9 378 32.3
TPR.G1458 Trifolium pratense HOM05D006426 ORTHO05D007737 2.0e-22 111.3 380 32.1
Ca_18074_v3 Cicer arietinum L. HOM05D006426 ORTHO05D007737 4.9e-21 106.7 381 31.8
unitig_62.g23190 Utricularia gibba HOM05D006426 ORTHO05D007737 3.0e-18 97.4 185 40.5
ATR0693G210 Amborella trichopoda HOM05D006426 ORTHO05D007737 3.9e-18 97.1 552 27.4
CDE10G0475 Ceratophyllum demersum HOM05D006426 ORTHO05D007737 2.5e-17 94.4 508 26.2
FvH4_6g44594 Fragaria vesca HOM05D006426 ORTHO05D007737 4.3e-17 93.6 178 36.5
GSVIVG01030006001 Vitis vinifera HOM05D006426 ORTHO05D007737 2.8e-16 90.9 170 40.0
Oeu029930.1 Olea europaea HOM05D006426 ORTHO05D007737 3.1e-15 87.4 158 44.9
Oeu035359.1 Olea europaea HOM05D006426 ORTHO05D007737 1.5e-14 85.1 158 43.0
Oeu003230.1 Olea europaea HOM05D006426 ORTHO05D007737 3.4e-14 84.0 158 44.9
HPP92_011117 Vanilla planifolia HOM05D006426 ORTHO05D007737 3.9e-10 70.5 463 26.8
SGA_v2.0_scaffold170G38835 Striga asiatica HOM05D001803 ORTHO05D007737 6.7e-10 69.7 47 72.3
HPP92_011122 Vanilla planifolia HOM05D006426 ORTHO05D007737 2.8e-08 64.3 446 23.3
Atru.chr6.3075 Acer truncatum HOM05D006426 ORTHO05D007737 5.3e-07 60.1 66 45.5


User provided reference genes

Program Settings