Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold49G18282 Striga asiatica HOM05D003782 ORTHO05D004361 0.0e+00 2031.1 1054 100.0
Migut.H01508 Erythranthe guttata HOM05D003782 ORTHO05D004361 1.9e-302 1042.7 1077 59.1
MSTRG.14684 Avicennia marina HOM05D003782 ORTHO05D004361 4.7e-277 958.4 1080 54.5
SalBow8G2382 Salvia bowleyana HOM05D003782 ORTHO05D004361 1.0e-260 904.0 1125 50.7
SalBow7G0940 Salvia bowleyana HOM05D003782 ORTHO05D004361 1.5e-246 857.1 1093 50.2
SalBow7G0271 Salvia bowleyana HOM05D003782 ORTHO05D004361 4.3e-246 855.5 1093 50.1
Hma1.2p1_0881F.1_g231940 Hydrangea macrophylla HOM05D003782 ORTHO05D004361 2.7e-232 809.7 861 55.1
Actinidia05612 Actinidia chinensis HOM05D003782 ORTHO05D004361 2.4e-225 786.6 858 54.2
Cc02_g13030 Coffea canephora HOM05D003782 ORTHO05D004361 7.8e-224 781.6 848 54.4
CAN.G1627.12 Capsicum annuum HOM05D003782 ORTHO05D004361 2.6e-219 766.5 951 51.7
CSS0005863 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 9.9e-219 764.6 811 55.7
Dinv07533 Davidia involucrata HOM05D003782 ORTHO05D004361 4.9e-218 762.3 869 54.2
Oeu014694.1 Olea europaea HOM05D003782 ORTHO05D004361 7.1e-217 758.4 1025 48.7
Peaxi162Scf00379g00065 Petunia axillaris HOM05D003782 ORTHO05D004361 1.2e-213 747.7 903 51.9
Sopen02g023410 Solanum pennellii HOM05D003782 ORTHO05D004361 1.4e-212 744.2 961 50.1
Nitab4.5_0011233g0010 Nicotiana tabacum HOM05D003782 ORTHO05D004361 5.2e-212 742.3 956 50.5
Solyc02g078560.4 Solanum lycopersicum HOM05D003782 ORTHO05D004361 5.4e-209 732.3 842 53.9
CSS0007425 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 8.7e-207 724.9 788 54.9
vmacro03847 Vaccinium macrocarpon HOM05D003782 ORTHO05D004361 5.6e-206 722.2 944 48.6
Thecc.06G191300 Theobroma cacao HOM05D003782 ORTHO05D004361 7.3e-206 721.8 911 50.1
Manes.16G025200 Manihot esculenta HOM05D003782 ORTHO05D004361 1.8e-204 717.2 921 48.9
Cfa000411 Carpinus fangiana HOM05D003782 ORTHO05D004361 4.5e-203 712.6 815 52.6
Duzib160G0524 Durio zibethinus HOM05D003782 ORTHO05D004361 1.9e-201 707.2 797 53.3
GSVIVG01006449001 Vitis vinifera HOM05D003782 ORTHO05D004361 1.9e-201 707.2 841 51.4
Manes.17G043000 Manihot esculenta HOM05D003782 ORTHO05D004361 4.2e-201 706.1 883 49.7
QL05p039400 Quercus lobata HOM05D003782 ORTHO05D004361 7.1e-201 705.3 809 52.3
Haze_06504 Corylus avellana HOM05D003782 ORTHO05D004361 2.3e-199 700.3 802 52.1
Gohir.A06G125300 Gossypium hirsutum HOM05D003782 ORTHO05D004361 3.0e-199 699.9 790 52.9
CiPaw.10G046700 Carya illinoinensis HOM05D003782 ORTHO05D004361 5.6e-198 695.7 781 51.3
CiPaw.09G056900 Carya illinoinensis HOM05D003782 ORTHO05D004361 1.3e-197 694.5 871 49.7
Potri.011G049300 Populus trichocarpa HOM05D003782 ORTHO05D004361 2.1e-197 693.7 875 48.2
Gohir.D06G130600 Gossypium hirsutum HOM05D003782 ORTHO05D004361 2.4e-196 690.3 894 49.4
Sabra11G0033700 Salix brachista HOM05D003782 ORTHO05D004361 6.9e-196 688.7 827 49.7
HanXRQChr04g0124181 Helianthus annuus HOM05D003782 ORTHO05D004361 2.0e-195 687.2 772 51.6
Atru.chr10.1947 Acer truncatum HOM05D003782 ORTHO05D004361 9.9e-195 684.9 842 50.1
Lsat_1_v5_gn_7_19080 Lactuca sativa HOM05D003782 ORTHO05D004361 1.3e-194 684.5 832 50.5
Dinv40534 Davidia involucrata HOM05D003782 ORTHO05D004361 2.9e-194 683.3 719 56.1
Potri.004G039900 Populus trichocarpa HOM05D003782 ORTHO05D004361 8.4e-194 681.8 924 46.2
RhsimUnG0044200 Rhododendron simsii HOM05D003782 ORTHO05D004361 1.1e-193 681.4 1061 44.9
Ciclev10014178m.g Citrus clementina HOM05D003782 ORTHO05D004361 4.2e-193 679.5 859 49.4
DCAR_008048 Daucus carota HOM05D003782 ORTHO05D004361 1.6e-192 677.6 1011 45.4
Nitab4.5_0003668g0120 Nicotiana tabacum HOM05D003782 ORTHO05D004361 2.1e-192 677.2 965 48.3
Gohir.A06G209800 Gossypium hirsutum HOM05D003782 ORTHO05D004361 2.7e-192 676.8 909 48.8
TAR624G0538 Trochodendron aralioides HOM05D003782 ORTHO05D003724 4.6e-192 676.0 790 51.1
Gorai.010G255000 Gossypium raimondii HOM05D003782 ORTHO05D004361 2.3e-191 673.7 898 48.9
CANSAT35G1194 Cannabis sativa HOM05D003782 ORTHO05D004361 3.0e-191 673.3 803 51.2
Lj1C1208G1 Lonicera japonica HOM05D003782 ORTHO05D004361 9.6e-190 668.3 844 50.1
Glyma.13G181800 Glycine max HOM05D003782 ORTHO05D004361 1.3e-189 667.9 795 50.2
Gohir.D06G211200 Gossypium hirsutum HOM05D003782 ORTHO05D004361 2.1e-189 667.2 898 48.7
TWI38G1173 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 1.2e-187 661.4 811 49.7
MBI17_g03751_MAGBIO Magnolia biondii HOM05D003782 ORTHO05D004361 2.6e-187 660.2 820 48.8
Lj4g0027811 Lotus japonicus HOM05D003782 ORTHO05D004361 1.7e-186 657.5 855 47.3
arahy.Tifrunner.gnm1.ann1.1A97AW Arachis hypogaea HOM05D003782 ORTHO05D004361 2.9e-186 656.8 813 48.8
HanXRQChr08g0209481 Helianthus annuus HOM05D003782 ORTHO05D004361 3.8e-186 656.4 803 49.3
MD10G1297100 Malus domestica HOM05D003782 ORTHO05D004361 3.8e-186 656.4 830 49.8
Glyma.07G194500 Glycine max HOM05D003782 ORTHO05D004361 2.5e-185 653.7 796 49.5
VMungo0251G3691 Vigna mungo HOM05D003782 ORTHO05D004361 2.5e-185 653.7 798 48.1
arahy.Tifrunner.gnm1.ann1.2GZF7Z Arachis hypogaea HOM05D003782 ORTHO05D004361 5.5e-185 652.5 813 49.0
Lalb_Chr05g0218361 Lupinus albus HOM05D003782 ORTHO05D004361 1.6e-184 651.0 807 48.3
PGR042G3934 Punica granatum HOM05D003782 ORTHO05D004361 4.6e-184 649.4 838 48.7
Prupe.4G043300 Prunus persica HOM05D003782 ORTHO05D004361 6.0e-184 649.0 813 49.7
Phvul.002G226800 Phaseolus vulgaris HOM05D003782 ORTHO05D004361 1.8e-183 647.5 800 48.5
RcHm_v2.0_Chr5g0007891 Rosa chinensis HOM05D003782 ORTHO05D004361 1.8e-183 647.5 822 49.8
MD05G1316600 Malus domestica HOM05D003782 ORTHO05D004361 2.3e-183 647.1 830 49.3
CsaV3_1G012120 Cucumis sativus L. HOM05D003782 ORTHO05D004361 5.1e-183 646.0 863 47.3
Eucgr.E03352 Eucalyptus grandis HOM05D003782 ORTHO05D004361 1.1e-182 644.8 788 48.9
Gorai.010G152400 Gossypium raimondii HOM05D003782 ORTHO05D004361 2.5e-182 643.7 823 49.7
ClCG03G005890 Citrullus lanatus HOM05D003782 ORTHO05D004361 1.8e-180 637.5 854 47.7
Sc05g0007840 Simmondsia chinensis HOM05D003782 ORTHO05D004361 2.0e-179 634.0 873 47.4
Sed0005800 Sechium edule HOM05D003782 ORTHO05D004361 6.5e-178 629.0 896 45.5
Aqoxy4G01073 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 2.5e-177 627.1 841 46.7
COL.COLO4_31507 Corchorus olitorius HOM05D003782 ORTHO05D004361 1.2e-176 624.8 937 45.0
FAN25G2149 Fragaria x ananassa HOM05D003782 ORTHO05D004361 2.7e-176 623.6 847 47.5
TPR.G12054 Trifolium pratense HOM05D003782 ORTHO05D004361 7.9e-176 622.1 887 44.2
FAN16G0824 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.8e-175 620.9 847 47.3
Lalb_Chr09g0327561 Lupinus albus HOM05D003782 ORTHO05D004361 6.7e-175 619.0 812 47.3
FAN21G1192 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.5e-174 617.8 889 46.1
FAN11G2511 Fragaria x ananassa HOM05D003782 ORTHO05D004361 9.7e-174 615.1 890 45.6
FvH4_3g04800 Fragaria vesca HOM05D003782 ORTHO05D004361 2.8e-173 613.6 926 45.1
Medtr4g089015 Medicago truncatula HOM05D003782 ORTHO05D004361 2.6e-171 607.1 950 42.1
Ca_18527_v3 Cicer arietinum L. HOM05D003782 ORTHO05D004361 3.8e-170 603.2 742 49.6
BcaC05g24980 Brassica carinata HOM05D003782 ORTHO05D004361 1.4e-169 601.3 783 46.4
CARHR011250 Cardamine hirsuta HOM05D003782 ORTHO05D004361 1.9e-169 600.9 788 46.2
unitig_26.g9369 Utricularia gibba HOM05D003782 ORTHO05D004361 4.2e-169 599.7 1083 41.5
Carub.0001s1062 Capsella rubella HOM05D003782 ORTHO05D004361 7.2e-169 599.0 819 45.8
Sp1g09750 Schrenkiella parvula HOM05D003782 ORTHO05D004361 3.0e-167 593.6 815 44.5
BraA06t23977Z Brassica rapa HOM05D003782 ORTHO05D004361 6.7e-167 592.4 816 45.6
Migut.M01185 Erythranthe guttata HOM05D003782 ORTHO05D004361 6.7e-167 592.4 954 45.8
C05p09350 Brassica napus HOM05D003782 ORTHO05D004361 2.6e-166 590.5 802 46.3
A06p07760 Brassica napus HOM05D003782 ORTHO05D004361 3.3e-166 590.1 816 45.2
C08p48360 Brassica napus HOM05D003782 ORTHO05D004361 2.2e-165 587.4 775 45.4
BolC8t52375H Brassica oleracea HOM05D003782 ORTHO05D004361 2.2e-165 587.4 775 45.4
Psat7g113440 Pisum sativum HOM05D003782 ORTHO05D004361 2.2e-165 587.4 923 41.9
EL10Ac8g20337 Beta vulgaris HOM05D003782 ORTHO05D004361 2.4e-164 583.9 801 46.6
BolC5t29675H Brassica oleracea HOM05D003782 ORTHO05D004361 5.9e-163 579.3 830 44.7
Thhalv10006765m.g Eutrema salsugineum HOM05D003782 ORTHO05D004361 5.9e-163 579.3 814 44.3
arahy.Tifrunner.gnm1.ann1.HPML60 Arachis hypogaea HOM05D003782 ORTHO05D004361 2.9e-162 577.0 799 45.1
AL1G22040 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 8.5e-162 575.5 823 43.4
ATR0680G033 Amborella trichopoda HOM05D003782 ORTHO05D004361 1.4e-161 574.7 785 45.6
PSO210G1870 Papaver somniferum HOM05D003782 ORTHO05D004361 2.5e-161 573.9 947 41.7
AL2G15410 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 7.2e-161 572.4 776 46.5
Lj6g0013812 Lotus japonicus HOM05D003782 ORTHO05D004361 2.7e-160 570.5 757 46.6
HPP92_014533 Vanilla planifolia HOM05D003782 ORTHO05D004361 6.1e-160 569.3 801 44.7
AT1G61030 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 1.0e-159 568.5 772 45.1
BraA09t41812Z Brassica rapa HOM05D003782 ORTHO05D004361 1.4e-159 568.2 876 42.4
Aa31LG1G3850 Aethionema arabicum HOM05D003782 ORTHO05D004361 1.8e-159 567.8 906 42.3
MELO3C002586.2 Cucumis melo HOM05D003782 ORTHO05D004361 1.8e-159 567.8 901 43.3
PSO832G0898 Papaver somniferum HOM05D003782 ORTHO05D004361 1.8e-159 567.8 947 41.5
Hund23698 Selenicereus undatus HOM05D003782 ORTHO05D004361 3.0e-159 567.0 789 46.0
AUR62014785 Chenopodium quinoa HOM05D003782 ORTHO05D004361 8.8e-159 565.5 864 44.6
AT1G11060 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 2.0e-158 564.3 818 42.5
CDE02G2556 Ceratophyllum demersum HOM05D003782 ORTHO05D004361 2.0e-158 564.3 876 42.5
Sp2g03490 Schrenkiella parvula HOM05D003782 ORTHO05D004361 2.6e-158 563.9 777 44.5
arahy.Tifrunner.gnm1.ann1.AS4EHM Arachis hypogaea HOM05D003782 ORTHO05D004361 3.3e-158 563.5 801 44.9
A09p64830 Brassica napus HOM05D003782 ORTHO05D004361 5.3e-156 556.2 867 41.6
Sed0026382 Sechium edule HOM05D003782 ORTHO05D004361 5.3e-156 556.2 801 45.4
Carub.0002s0417 Capsella rubella HOM05D003782 ORTHO05D004361 1.3e-154 551.6 788 45.2
CARHR052160 Cardamine hirsuta HOM05D003782 ORTHO05D004361 1.3e-154 551.6 798 44.4
Ah.14g089260 Amaranthus hybridus HOM05D003782 ORTHO05D004361 1.7e-154 551.2 906 43.2
AUR62016973 Chenopodium quinoa HOM05D003782 ORTHO05D004361 8.5e-154 548.9 805 44.8
BcaC07g41789 Brassica carinata HOM05D003782 ORTHO05D004361 1.2e-152 545.0 801 43.3
Os10g0497000 Oryza sativa ssp. japonica HOM05D003782 ORTHO05D004361 4.7e-152 543.1 800 44.1
Aa31LG2G9560 Aethionema arabicum HOM05D003782 ORTHO05D004361 5.7e-150 536.2 764 45.3
Lalb_Chr20g0122011 Lupinus albus HOM05D003782 ORTHO05D004361 5.7e-150 536.2 716 46.2
Zm00001eb220930 Zea mays HOM05D003782 ORTHO05D004361 9.1e-148 528.9 784 43.5
Sabra04G0024600 Salix brachista HOM05D003782 ORTHO05D004361 1.2e-136 491.9 800 42.0
Duzib235G1248 Durio zibethinus HOM05D003782 ORTHO05D004361 2.1e-136 491.1 839 42.7
Duzib192G0241 Durio zibethinus HOM05D003782 ORTHO05D004361 1.2e-134 485.3 839 42.0
Ah.09g235740 Amaranthus hybridus HOM05D003782 ORTHO05D004361 5.8e-126 456.4 833 41.3
Pp3c9_20340 Physcomitrium patens HOM05D003782 ORTHO05D004361 2.0e-118 431.4 798 37.6
Pp3c9_20349 Physcomitrium patens HOM05D003782 ORTHO05D004361 2.0e-118 431.4 798 37.6
Mapoly0014s0099 Marchantia polymorpha HOM05D003782 ORTHO05D004361 2.4e-103 381.3 1057 31.9
Zm00001eb044640 Zea mays HOM05D003782 ORTHO05D004361 9.2e-100 369.4 663 38.8
ECA236G4595 Erigeron canadensis HOM05D003782 ORTHO05D004361 3.3e-97 360.9 528 46.0
SMO169G0190 Selaginella moellendorffii HOM05D003782 ORTHO05D004361 1.1e-95 355.9 748 34.9
Aqoxy6G00197 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 6.2e-80 303.5 321 55.5
Cpa.g.sc27.74 Carica papaya HOM05D003782 ORTHO05D004361 7.1e-76 290.0 364 49.7
CBR_g19729 Chara braunii HOM05D003782 ORTHO05D004361 6.5e-69 266.9 960 27.9
FAN07G0886 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.1e-68 266.2 285 51.6
Lj6g0001672 Lotus japonicus HOM05D003782 ORTHO05D004361 3.2e-68 264.6 371 49.9
CSS0036804 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 2.4e-63 248.4 358 46.6
Oeu043706.1 Olea europaea HOM05D003782 ORTHO05D004361 2.4e-63 248.4 389 45.0
SEGI_34470 Sequoiadendron giganteum HOM05D003782 ORTHO05D004361 1.8e-58 232.3 260 51.2
SHI01818 Sapria himalayana HOM05D003782 ORTHO05D004361 2.7e-51 208.4 436 37.2
Lj6g0027699 Lotus japonicus HOM05D003782 ORTHO05D004361 1.0e-45 189.9 259 41.7
Sabra04G0024500 Salix brachista HOM05D003782 ORTHO05D004361 6.1e-43 180.6 137 66.4
Cpa.g.sc27.75 Carica papaya HOM05D003782 ORTHO05D004361 1.0e-37 163.3 419 33.4
SEGI_13110 Sequoiadendron giganteum HOM05D003782 ORTHO05D004361 1.2e-30 139.8 195 42.1
ECA236G3594 Erigeron canadensis HOM05D003782 ORTHO05D004361 2.7e-30 138.7 186 50.0
FAN28G2813 Fragaria x ananassa HOM05D003782 ORTHO05D004361 4.7e-27 127.9 92 69.6
TWI12G0412 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 6.1e-27 127.5 193 44.6
Zm00001eb006190 Zea mays HOM05D003782 ORTHO05D004361 4.8e-24 117.9 156 42.3
BcaC05g24978 Brassica carinata HOM05D003782 ORTHO05D004361 6.3e-24 117.5 93 60.2
TWI12G0828 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 1.1e-23 116.7 174 45.4
arahy.Tifrunner.gnm1.ann1.M5G8HU Arachis hypogaea HOM05D003782 ORTHO05D004361 4.1e-23 114.8 85 65.9
arahy.Tifrunner.gnm1.ann1.04J95Q Arachis hypogaea HOM05D003782 ORTHO05D004361 5.0e-21 107.8 111 54.1
arahy.Tifrunner.gnm1.ann1.S76ADD Arachis hypogaea HOM05D001687 ORTHO05D001608 1.6e-19 102.8 78 65.4
arahy.Tifrunner.gnm1.ann1.IMK82Y Arachis hypogaea HOM05D003782 ORTHO05D004361 1.7e-16 92.8 71 62.0
MD09G1213100 Malus domestica HOM05D003782 ORTHO05D004361 1.4e-15 89.7 96 53.1
Zm00001eb432110 Zea mays HOM05D003782 ORTHO05D004361 2.4e-15 89.0 89 51.7
Zm00001eb335960 Zea mays HOM05D003782 ORTHO05D004361 4.1e-15 88.2 118 41.5
QL05p013418 Quercus lobata HOM05D003782 ORTHO05D004361 1.2e-14 86.7 57 75.4
Zm00001eb179180 Zea mays HOM05D003782 ORTHO05D004361 1.0e-13 83.6 89 49.4
CSS0006007 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 1.7e-13 82.8 60 71.7
VMungo0251G1485 Vigna mungo HOM05D003782 ORTHO05D004361 2.9e-13 82.0 59 67.8
TAR626G0244 Trochodendron aralioides HOM05D003782 ORTHO05D004361 5.0e-13 81.3 65 56.9
Nn1g04009 Nelumbo nucifera HOM05D003782 ORTHO05D004361 6.6e-13 80.9 88 48.9
VMungo0331G2027 Vigna mungo HOM05D003782 ORTHO05D004361 1.1e-12 80.1 89 51.7
ATR0561G103 Amborella trichopoda HOM05D003782 ORTHO05D004361 8.0e-11 73.9 116 41.4
arahy.Tifrunner.gnm1.ann1.R5EEB5 Arachis hypogaea HOM05D003782 ORTHO05D004361 1.8e-10 72.8 62 56.5
CARHR034020 Cardamine hirsuta HOM05D003782 ORTHO05D004361 6.8e-10 70.9 84 46.4
SHI01816 Sapria himalayana HOM05D005377 ORTHO05D003034 1.5e-09 69.7 81 49.4
arahy.Tifrunner.gnm1.ann1.IG0W9M Arachis hypogaea HOM05D003782 ORTHO05D004361 1.3e-08 66.6 73 50.7
Zm00001eb208870 Zea mays HOM05D000229 ORTHO05D004361 3.7e-08 65.1 126 36.5
Zm00001eb174580 Zea mays HOM05D003782 ORTHO05D004361 1.2e-06 60.1 66 43.9
QL11p045598 Quercus lobata HOM05D005703 ORTHO05D006643 2.0e-06 59.3 44 70.5
Zm00001eb032810 Zea mays HOM05D003782 ORTHO05D004361 2.0e-06 59.3 57 49.1


User provided reference genes

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