Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 0.0e+00 1258.8 626 100.0
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 7.7e-211 737.6 714 59.7
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 1.1e-193 680.6 595 60.3
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 7.2e-193 677.9 623 58.3
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 7.0e-188 661.4 579 59.4
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 2.7e-184 649.4 561 61.9
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 4.7e-184 648.7 606 58.3
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 8.0e-184 647.9 540 62.8
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 3.0e-183 646.0 601 59.4
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 2.6e-182 642.9 579 59.4
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 4.9e-181 638.6 586 59.4
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 2.4e-180 636.3 569 60.8
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 3.5e-179 632.5 575 59.8
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 3.5e-179 632.5 575 59.1
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 7.7e-179 631.3 519 62.6
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 1.7e-178 630.2 520 62.1
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 2.3e-178 629.8 669 53.2
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 4.3e-177 625.5 485 65.4
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 1.6e-176 623.6 547 58.3
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 1.6e-176 623.6 593 56.7
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 3.6e-176 622.5 593 57.5
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 6.1e-176 621.7 561 58.1
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 5.2e-175 618.6 607 54.5
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 3.4e-174 615.9 440 66.4
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 7.5e-174 614.8 410 70.5
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 2.9e-173 612.8 540 59.3
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 2.9e-173 612.8 639 55.1
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 4.9e-173 612.1 554 58.5
Prupe.4G036900 Prunus persica HOM05D007621 ORTHO05D009631 4.9e-173 612.1 650 52.0
CDE12G0841 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 6.4e-173 611.7 564 57.4
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 6.4e-173 611.7 456 65.6
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 8.3e-173 611.3 522 60.9
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 3.2e-172 609.4 487 64.1
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 4.6e-171 605.5 572 57.5
RcHm_v2.0_Chr5g0006311 Rosa chinensis HOM05D007621 ORTHO05D009631 4.6e-171 605.5 597 55.3
Cfa000351 Carpinus fangiana HOM05D007621 ORTHO05D009631 7.8e-171 604.7 654 52.8
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 7.8e-171 604.7 439 67.0
TWI38G0795 Tripterygium wilfordii HOM05D007621 ORTHO05D009631 5.0e-170 602.1 578 55.0
Ciclev10014484m.g Citrus clementina HOM05D007621 ORTHO05D009631 1.5e-169 600.5 446 65.7
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 1.2e-168 597.4 640 53.3
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 1.6e-168 597.0 465 64.3
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 2.1e-168 596.7 584 55.1
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 1.0e-167 594.3 662 50.6
HPP92_005890 Vanilla planifolia HOM05D007621 ORTHO05D009631 1.0e-167 594.3 532 58.6
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 2.3e-167 593.2 570 56.0
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 3.4e-166 589.3 625 53.0
CDE01G0329 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 4.4e-166 589.0 441 65.3
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 1.7e-165 587.0 399 70.2
FAN11G2677 Fragaria x ananassa HOM05D007621 ORTHO05D009631 4.9e-165 585.5 543 56.9
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 1.6e-163 580.5 615 51.9
Os04g0636000 Oryza sativa ssp. japonica HOM05D007621 ORTHO05D009631 1.6e-163 580.5 458 63.1
MD05G1325500 Malus domestica HOM05D007621 ORTHO05D009631 2.7e-163 579.7 629 52.3
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 5.6e-161 572.0 496 58.9
Psat1g208720 Pisum sativum HOM05D007621 ORTHO05D009631 6.2e-160 568.5 439 62.4
Zm00001eb069260 Zea mays HOM05D007621 ORTHO05D009631 6.2e-160 568.5 534 55.2
arahy.Tifrunner.gnm1.ann1.M1GH8V Arachis hypogaea HOM05D007621 ORTHO05D009631 3.2e-156 556.2 489 58.9
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 9.2e-156 554.7 511 56.9
Ca_00253_v3 Cicer arietinum L. HOM05D007621 ORTHO05D009631 7.8e-155 551.6 493 57.2
HanXRQChr11g0338441 Helianthus annuus HOM05D007621 ORTHO05D009631 7.8e-155 551.6 564 53.2
FAN16G2797 Fragaria x ananassa HOM05D007621 ORTHO05D009631 1.7e-154 550.4 659 48.6
Mapoly0104s0019 Marchantia polymorpha HOM05D007621 ORTHO05D009631 3.9e-154 549.3 405 64.7
CDE01G0148 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 8.1e-152 541.6 456 59.9
arahy.Tifrunner.gnm1.ann1.14L1JV Arachis hypogaea HOM05D007621 ORTHO05D009631 2.7e-147 526.6 603 49.3
TPR.G36840 Trifolium pratense HOM05D007621 ORTHO05D009631 7.8e-147 525.0 601 48.4
Phvul.006G192200 Phaseolus vulgaris HOM05D007621 ORTHO05D009631 1.2e-144 517.7 521 54.7
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 1.6e-144 517.3 492 56.3
PGR042G3240 Punica granatum HOM05D007621 ORTHO05D009631 2.9e-141 506.5 559 50.3
Zm00001eb081180 Zea mays HOM05D007621 ORTHO05D009631 7.6e-126 455.3 402 57.2
Thecc.06G199600 Theobroma cacao HOM05D007621 ORTHO05D009631 5.8e-118 429.1 487 48.9
CBR_g725 Chara braunii HOM05D007621 ORTHO05D009631 1.0e-117 428.3 422 50.9
Aqoxy1G02733 Aquilegia oxysepala HOM05D007621 ORTHO05D009631 1.7e-109 401.0 287 67.2
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 3.6e-99 366.7 252 71.4
Zm00001eb274720 Zea mays HOM05D007621 ORTHO05D009631 5.5e-92 342.8 287 61.3
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 1.2e-78 298.5 274 59.9
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 7.7e-78 295.8 339 52.2
Medtr2g011780 Medicago truncatula HOM05D007621 ORTHO05D009631 1.0e-77 295.4 279 54.8
RcHm_v2.0_Chr7g0240451 Rosa chinensis HOM05D007621 ORTHO05D009631 2.2e-77 294.3 397 44.1
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 3.1e-71 273.9 326 51.2
arahy.Tifrunner.gnm1.ann1.C857YU Arachis hypogaea HOM05D007621 ORTHO05D009631 1.3e-61 241.9 279 48.0
Psat1g210360 Pisum sativum HOM05D007621 ORTHO05D009631 2.9e-56 224.2 187 58.8
FvH4_6g02023 Fragaria vesca HOM05D007621 ORTHO05D009631 1.6e-38 165.2 133 57.1
Glyma.13G246302 Glycine max HOM05D007621 ORTHO05D009631 3.1e-34 151.0 148 54.7
Cre02.g116800 Chlamydomonas reinhardtii HOM05D007621 ORTHO05D009631 1.1e-31 142.5 487 28.5
SGA_v2.0_scaffold32G13107 Striga asiatica HOM05D007621 ORTHO05D009631 2.4e-31 141.4 125 60.8
Atru.chr10.2012 Acer truncatum HOM05D007621 ORTHO05D009631 4.6e-30 137.1 133 53.4
Potri.004G034301 Populus trichocarpa HOM05D007621 ORTHO05D009631 4.0e-26 124.0 78 69.2
SGA_v2.0_scaffold86G26914 Striga asiatica HOM05D007621 ORTHO05D009631 5.8e-17 93.6 58 75.9
Atru.chr10.2011 Acer truncatum HOM05D007621 ORTHO05D009631 4.9e-16 90.5 81 58.0
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 6.4e-16 90.1 201 36.8
SGA_v2.0_scaffold26G11386 Striga asiatica HOM05D007621 ORTHO05D009631 7.9e-14 83.2 61 63.9
AagrBONN_evm.TU.Sc2ySwM_340.408 Anthoceros agrestis HOM05D007621 ORTHO05D009631 5.1e-13 80.5 77 51.9
MCO11G679 Micromonas commoda HOM05D000032 ORTHO05D028824 9.6e-12 76.3 183 32.8
EL10Ac8g20531 Beta vulgaris HOM05D007621 ORTHO05D009631 1.8e-10 72.0 130 37.7
PRCOL_00005975 Prasinoderma coloniale HOM05D000032 ORTHO05D028824 6.9e-10 70.1 185 28.6
Cre03.g188750 Chlamydomonas reinhardtii HOM05D000032 ORTHO05D028824 1.2e-09 69.3 201 30.3
Haze_26842 Corylus avellana HOM05D000032 ORTHO05D028824 5.8e-09 67.0 190 31.6
Sabra04G0020100 Salix brachista HOM05D007621 ORTHO05D009631 3.8e-08 64.3 169 26.6


User provided reference genes

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