Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold49G18239 Striga asiatica HOM05D041410 ORTHO05D000959 3.6e-61 238.0 118 100.0
SGA_v2.0_scaffold49G18240 Striga asiatica HOM05D004197 ORTHO05D004975 3.3e-14 82.0 86 51.2
THA.LOC104815487 Tarenaya hassleriana HOM05D000519 ORTHO05D000959 2.4e-09 65.9 81 43.2
GSVIVG01003320001 Vitis vinifera HOM05D000519 ORTHO05D000959 3.2e-09 65.5 121 37.2
Aa31LG2G12610 Aethionema arabicum HOM05D000519 ORTHO05D000959 4.2e-09 65.1 122 35.2
AL4G28250 Arabidopsis lyrata HOM05D000519 ORTHO05D000959 4.2e-09 65.1 112 33.9
Thhalv10026611m.g Eutrema salsugineum HOM05D000519 ORTHO05D000959 9.3e-09 63.9 104 36.5
Thecc.06G234700 Theobroma cacao HOM05D000519 ORTHO05D000959 1.2e-08 63.5 94 38.3
BcaC07g37991 Brassica carinata HOM05D000519 ORTHO05D000959 2.7e-08 62.4 104 39.4
BolC8t48374H Brassica oleracea HOM05D000519 ORTHO05D000959 2.7e-08 62.4 104 39.4
A08p12510 Brassica napus HOM05D000519 ORTHO05D000959 3.5e-08 62.0 104 39.4
BraA08t33241Z Brassica rapa HOM05D000519 ORTHO05D000959 3.5e-08 62.0 104 39.4
COL.COLO4_31900 Corchorus olitorius HOM05D000919 ORTHO05D001187 4.6e-08 61.6 94 39.4
TWI63G0767 Tripterygium wilfordii HOM05D000519 ORTHO05D000959 4.6e-08 61.6 114 35.1
Eucgr.E03919 Eucalyptus grandis HOM05D000519 ORTHO05D000959 6.0e-08 61.2 81 40.7
HanXRQChr17g0544761 Helianthus annuus HOM05D000519 ORTHO05D000959 6.0e-08 61.2 86 37.2
PGR042G1719 Punica granatum HOM05D000519 ORTHO05D000959 1.0e-07 60.5 81 40.7
Nn1g07421 Nelumbo nucifera HOM05D000519 ORTHO05D000959 1.3e-07 60.1 122 34.4
Lalb_Chr15g0088031 Lupinus albus HOM05D000519 ORTHO05D000959 1.8e-07 59.7 81 38.3
Nn3g21162 Nelumbo nucifera HOM05D000519 ORTHO05D000959 1.8e-07 59.7 80 38.8
Nn3g21163 Nelumbo nucifera HOM05D000519 ORTHO05D000959 1.8e-07 59.7 80 38.8
Aqoxy1G04038 Aquilegia oxysepala HOM05D000519 ORTHO05D000959 2.3e-07 59.3 94 34.0
Cfa000088 Carpinus fangiana HOM05D000519 ORTHO05D000959 3.0e-07 58.9 94 35.1
Duzib192G0996 Durio zibethinus HOM05D000519 ORTHO05D000959 3.0e-07 58.9 121 33.9
SGA_v2.0_scaffold89G27507 Striga asiatica HOM05D041410 ORTHO05D405376 3.0e-07 58.9 111 37.8
CSS0008277 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 3.9e-07 58.5 122 32.8
CSS0041609 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 3.9e-07 58.5 122 32.8
TAR629G0911 Trochodendron aralioides HOM05D000519 ORTHO05D000959 3.9e-07 58.5 94 36.2
Haze_09252 Corylus avellana HOM05D000519 ORTHO05D000959 5.1e-07 58.2 107 33.6
Gohir.A06G154000 Gossypium hirsutum HOM05D000519 ORTHO05D000959 6.7e-07 57.8 109 34.9
Sp7g15050 Schrenkiella parvula HOM05D000519 ORTHO05D000959 6.7e-07 57.8 94 36.2
Dinv13973 Davidia involucrata HOM05D000519 ORTHO05D000959 8.7e-07 57.4 94 38.3
Gohir.D06G160700 Gossypium hirsutum HOM05D000519 ORTHO05D000959 8.7e-07 57.4 109 34.9
Gorai.010G187500 Gossypium raimondii HOM05D000519 ORTHO05D000959 8.7e-07 57.4 109 34.9
Sc17g0007820 Simmondsia chinensis HOM05D000519 ORTHO05D000959 8.7e-07 57.4 94 38.3
Solyc04g014790.1 Solanum lycopersicum HOM05D000519 ORTHO05D000959 8.7e-07 57.4 93 38.7
Eucgr.E03923 Eucalyptus grandis HOM05D000519 ORTHO05D000959 1.1e-06 57.0 81 39.5
Aa31LG9G7070 Aethionema arabicum HOM05D000519 ORTHO05D000959 1.5e-06 56.6 100 33.0
CiPaw.09G103500 Carya illinoinensis HOM05D000519 ORTHO05D000959 1.5e-06 56.6 81 34.6
ECA246G1681 Erigeron canadensis HOM05D000519 ORTHO05D000959 1.5e-06 56.6 83 39.8
Migut.M01409 Erythranthe guttata HOM05D000519 ORTHO05D000959 1.5e-06 56.6 119 36.1
Lalb_Chr18g0057041 Lupinus albus HOM05D000519 ORTHO05D000959 1.5e-06 56.6 113 34.5
Oeu009405.1 Olea europaea HOM05D000519 ORTHO05D000959 1.5e-06 56.6 94 38.3
Aa31LG3G7150 Aethionema arabicum HOM05D000519 ORTHO05D000959 1.9e-06 56.2 109 34.9
Aa31LG3G7160 Aethionema arabicum HOM05D000519 ORTHO05D000959 1.9e-06 56.2 109 34.9
CANSAT56G2160 Cannabis sativa HOM05D000519 ORTHO05D000959 1.9e-06 56.2 110 32.7
Psat7g244200 Pisum sativum HOM05D000519 ORTHO05D000959 1.9e-06 56.2 115 32.2
HPP92_014276 Vanilla planifolia HOM05D000519 ORTHO05D000959 1.9e-06 56.2 91 37.4
Aa31LG9G7000 Aethionema arabicum HOM05D000519 ORTHO05D000959 2.5e-06 55.8 101 33.7
Nn5g27763 Nelumbo nucifera HOM05D000519 ORTHO05D000959 2.5e-06 55.8 93 39.8
Nitab4.5_0001109g0080 Nicotiana tabacum HOM05D000519 ORTHO05D000959 2.5e-06 55.8 94 36.2
Sopen04g006920 Solanum pennellii HOM05D000519 ORTHO05D000959 2.5e-06 55.8 93 37.6
Aa31LG2G12570 Aethionema arabicum HOM05D000519 ORTHO05D019510 3.3e-06 55.5 104 34.6
BcaB01g03103 Brassica carinata HOM05D000519 ORTHO05D000959 3.3e-06 55.5 115 36.5
Nn5g27758 Nelumbo nucifera HOM05D000519 ORTHO05D000959 3.3e-06 55.5 81 33.3
MSTRG.7159 Avicennia marina HOM05D000519 ORTHO05D000959 4.3e-06 55.1 121 35.5
HPP92_024487 Vanilla planifolia HOM05D000519 ORTHO05D000959 4.3e-06 55.1 91 37.4
Carub.0007s2500 Capsella rubella HOM05D000519 ORTHO05D000959 5.6e-06 54.7 93 36.6
Carub.0008s0023 Capsella rubella HOM05D000519 ORTHO05D000959 5.6e-06 54.7 81 37.0
Nitab4.5_0004646g0100 Nicotiana tabacum HOM05D000519 ORTHO05D000959 5.6e-06 54.7 94 34.0
Aqoxy1G04041 Aquilegia oxysepala HOM05D000519 ORTHO05D000959 9.6e-06 53.9 113 31.0
CAN.G1263.20 Capsicum annuum HOM05D000519 ORTHO05D000959 9.6e-06 53.9 111 35.1
Ca_21039_v3 Cicer arietinum L. HOM05D000519 ORTHO05D000959 9.6e-06 53.9 103 31.1
Medtr2g103740 Medicago truncatula HOM05D000519 ORTHO05D000959 9.6e-06 53.9 113 35.4
Medtr4g095630 Medicago truncatula HOM05D000519 ORTHO05D000959 9.6e-06 53.9 101 33.7


User provided reference genes

Program Settings