Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold49G18238 Striga asiatica HOM05D000519 ORTHO05D000959 1.4e-58 229.6 128 100.0
SGA_v2.0_scaffold4G01865 Striga asiatica HOM05D000919 ORTHO05D001187 2.6e-12 75.9 104 43.3
SalBow8G3278 Salvia bowleyana HOM05D000519 ORTHO05D000959 4.8e-11 71.6 122 37.7
Cpa.g.sc75.103 Carica papaya HOM05D000519 ORTHO05D000959 8.3e-11 70.9 121 38.0
SalBow8G0930 Salvia bowleyana HOM05D000519 ORTHO05D000959 1.1e-10 70.5 122 36.9
Nitab4.5_0001109g0080 Nicotiana tabacum HOM05D000519 ORTHO05D000959 3.1e-10 68.9 120 37.5
Nitab4.5_0000143g0140 Nicotiana tabacum HOM05D000519 ORTHO05D016886 7.0e-10 67.8 94 45.7
MSTRG.7159 Avicennia marina HOM05D000519 ORTHO05D000959 2.7e-09 65.9 127 37.8
CSS0008277 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 2.7e-09 65.9 112 40.2
CSS0041609 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 2.7e-09 65.9 112 40.2
Medtr4g017620 Medicago truncatula HOM05D000519 ORTHO05D000959 4.5e-09 65.1 117 40.2
Nitab4.5_0005135g0030 Nicotiana tabacum HOM05D000519 ORTHO05D000959 4.5e-09 65.1 80 46.2
RcHm_v2.0_Chr5g0001051 Rosa chinensis HOM05D000519 ORTHO05D000959 5.9e-09 64.7 123 36.6
Nitab4.5_0001735g0110 Nicotiana tabacum HOM05D000519 ORTHO05D000959 7.7e-09 64.3 117 39.3
Sc17g0007820 Simmondsia chinensis HOM05D000519 ORTHO05D000959 7.7e-09 64.3 124 37.1
Oeu047064.1 Olea europaea HOM05D000519 ORTHO05D000959 1.0e-08 63.9 83 45.8
Peaxi162Scf00924g00035 Petunia axillaris HOM05D000519 ORTHO05D000959 1.0e-08 63.9 122 38.5
Prupe.4G008900 Prunus persica HOM05D000519 ORTHO05D000959 1.3e-08 63.5 124 37.1
THA.LOC104817839 Tarenaya hassleriana HOM05D000519 ORTHO05D000959 1.3e-08 63.5 120 38.3
PGSC0003DMG400008460 Solanum tuberosum HOM05D000519 ORTHO05D000959 1.7e-08 63.2 130 34.6
Nitab4.5_0004646g0100 Nicotiana tabacum HOM05D000519 ORTHO05D000959 2.2e-08 62.8 123 34.1
Oeu009405.1 Olea europaea HOM05D000519 ORTHO05D000959 2.2e-08 62.8 108 41.7
Aa31LG3G7150 Aethionema arabicum HOM05D000519 ORTHO05D000959 2.9e-08 62.4 99 40.4
Sopen04g006920 Solanum pennellii HOM05D000519 ORTHO05D000959 2.9e-08 62.4 111 37.8
Medtr2g076800 Medicago truncatula HOM05D000519 ORTHO05D000959 3.8e-08 62.0 109 33.9
Peaxi162Scf00924g00023 Petunia axillaris HOM05D000519 ORTHO05D000959 5.0e-08 61.6 122 37.7
Peaxi162Scf00924g00031 Petunia axillaris HOM05D000519 ORTHO05D000959 5.0e-08 61.6 122 37.7
Peaxi162Scf00924g00032 Petunia axillaris HOM05D000519 ORTHO05D000959 5.0e-08 61.6 122 37.7
Peaxi162Scf00924g00034 Petunia axillaris HOM05D000519 ORTHO05D000959 5.0e-08 61.6 122 36.9
SalBow8G0429 Salvia bowleyana HOM05D000519 ORTHO05D000959 5.0e-08 61.6 81 43.2
Aa31LG2G12570 Aethionema arabicum HOM05D000519 ORTHO05D019510 6.5e-08 61.2 84 41.7
MD05G1358900 Malus domestica HOM05D000519 ORTHO05D000959 6.5e-08 61.2 121 38.8
Aa31LG3G7160 Aethionema arabicum HOM05D000519 ORTHO05D000959 8.5e-08 60.8 99 39.4
Nitab4.5_0003626g0060 Nicotiana tabacum HOM05D015638 ORTHO05D016886 8.5e-08 60.8 93 40.9
Solyc04g014790.1 Solanum lycopersicum HOM05D000519 ORTHO05D000959 8.5e-08 60.8 111 36.9
CSS0015208 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 1.1e-07 60.5 115 38.3
Sed0023459 Sechium edule HOM05D000519 ORTHO05D000959 1.1e-07 60.5 103 39.8
Aa31LG7G5010 Aethionema arabicum HOM05D000519 ORTHO05D000959 1.5e-07 60.1 84 40.5
MD10G1333500 Malus domestica HOM05D000519 ORTHO05D000959 1.5e-07 60.1 83 44.6
Sopen05g032610 Solanum pennellii HOM05D000519 ORTHO05D000959 1.5e-07 60.1 88 38.6
Thecc.03G313400 Theobroma cacao HOM05D000519 ORTHO05D000959 1.5e-07 60.1 65 49.2
Aa31LG2G12610 Aethionema arabicum HOM05D000519 ORTHO05D000959 1.9e-07 59.7 123 35.0
Prupe.4G009000 Prunus persica HOM05D000519 ORTHO05D000959 1.9e-07 59.7 101 41.6
Rhsim02G0101200 Rhododendron simsii HOM05D000519 ORTHO05D000959 1.9e-07 59.7 93 40.9
CSS0026174 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D000959 2.5e-07 59.3 124 37.1
Ciclev10009506m.g Citrus clementina HOM05D000519 ORTHO05D000959 2.5e-07 59.3 112 35.7
Peaxi162Scf00610g00115 Petunia axillaris HOM05D000519 ORTHO05D000959 2.5e-07 59.3 81 42.0
FvH4_3g00830 Fragaria vesca HOM05D000519 ORTHO05D000959 3.2e-07 58.9 116 36.2
Nn1g07421 Nelumbo nucifera HOM05D000519 ORTHO05D000959 3.2e-07 58.9 85 42.4
PGSC0003DMG402023603 Solanum tuberosum HOM05D000519 ORTHO05D000959 3.2e-07 58.9 83 42.2
Atru.chr1.2387 Acer truncatum HOM05D000519 ORTHO05D000959 4.2e-07 58.5 88 42.0
Solyc05g054120.1 Solanum lycopersicum HOM05D000519 ORTHO05D000959 4.2e-07 58.5 88 39.8
THA.LOC104815487 Tarenaya hassleriana HOM05D000519 ORTHO05D000959 4.2e-07 58.5 79 43.0
Duzib205G0308 Durio zibethinus HOM05D000519 ORTHO05D000959 5.5e-07 58.2 75 44.0
Medtr2g026040 Medicago truncatula HOM05D000519 ORTHO05D000959 5.5e-07 58.2 82 35.4
CAN.G1263.20 Capsicum annuum HOM05D000519 ORTHO05D000959 7.2e-07 57.8 83 37.3
Medtr4g133540 Medicago truncatula HOM05D000519 ORTHO05D000959 7.2e-07 57.8 83 41.0
DCAR_002225 Daucus carota HOM05D000519 ORTHO05D000959 9.4e-07 57.4 60 45.0
Sopen11g007140 Solanum pennellii HOM05D000519 ORTHO05D000959 9.4e-07 57.4 122 35.2
CsaV3_1G017140 Cucumis sativus L. HOM05D000519 ORTHO05D000959 1.2e-06 57.0 104 37.5
Ca_21040_v3 Cicer arietinum L. HOM05D000519 ORTHO05D000959 1.6e-06 56.6 80 41.2
Migut.M01408 Erythranthe guttata HOM05D000519 ORTHO05D000959 1.6e-06 56.6 85 40.0
RcHm_v2.0_Chr3g0455001 Rosa chinensis HOM05D000519 ORTHO05D000959 1.6e-06 56.6 79 38.0
Aa31sc118G120 Aethionema arabicum HOM05D000519 ORTHO05D000959 2.1e-06 56.2 61 45.9
BcaC06g31374 Brassica carinata HOM05D000519 ORTHO05D000959 2.1e-06 56.2 83 38.6
MELO3C025557.2 Cucumis melo HOM05D000519 ORTHO05D000959 2.1e-06 56.2 118 35.6
Nn5g27758 Nelumbo nucifera HOM05D000519 ORTHO05D000959 2.1e-06 56.2 58 48.3
Rhsim13G0144500 Rhododendron simsii HOM05D000519 ORTHO05D000959 2.1e-06 56.2 84 41.7
Rhsim13G0144700 Rhododendron simsii HOM05D000519 ORTHO05D000959 2.1e-06 56.2 123 35.0
Aa31sc265G20 Aethionema arabicum HOM05D000519 ORTHO05D000959 2.7e-06 55.8 99 37.4
CsaV3_6G041540 Cucumis sativus L. HOM05D000519 ORTHO05D034688 2.7e-06 55.8 98 32.7
Lsat_1_v5_gn_1_114580 Lactuca sativa HOM05D000519 ORTHO05D000959 2.7e-06 55.8 103 35.0
MD03G1148300 Malus domestica HOM05D000519 ORTHO05D000959 2.7e-06 55.8 122 34.4
Os03g0210100 Oryza sativa ssp. japonica HOM05D000519 ORTHO05D000959 2.7e-06 55.8 121 36.4
EL10Ac8g20214 Beta vulgaris HOM05D000519 ORTHO05D000959 3.6e-06 55.5 121 32.2
BcaNung00185 Brassica carinata HOM05D000519 ORTHO05D000959 3.6e-06 55.5 98 36.7
Glyma.07G266000 Glycine max HOM05D000519 ORTHO05D000959 3.6e-06 55.5 84 41.7
Solyc11g012385.1 Solanum lycopersicum HOM05D000519 ORTHO05D000959 3.6e-06 55.5 122 35.2
Eucgr.E03919 Eucalyptus grandis HOM05D000519 ORTHO05D000959 4.7e-06 55.1 75 45.3
Nitab4.5_0007568g0010 Nicotiana tabacum HOM05D015638 ORTHO05D016886 4.7e-06 55.1 134 34.3
Psat7g244200 Pisum sativum HOM05D000519 ORTHO05D000959 4.7e-06 55.1 81 42.0
Rhsim13G0144600 Rhododendron simsii HOM05D000519 ORTHO05D000959 4.7e-06 55.1 123 33.3
RcHm_v2.0_Chr5g0010271 Rosa chinensis HOM05D000519 ORTHO05D000959 4.7e-06 55.1 122 35.2
CAN.G5949.1 Capsicum annuum HOM05D000519 ORTHO05D000959 6.1e-06 54.7 122 36.1
AUR62021845 Chenopodium quinoa HOM05D000519 ORTHO05D000959 6.1e-06 54.7 78 43.6
Peaxi162Scf00352g00051 Petunia axillaris HOM05D015638 ORTHO05D016886 6.1e-06 54.7 83 36.1
Psat2g010240 Pisum sativum HOM05D000519 ORTHO05D000959 6.1e-06 54.7 76 38.2
Sed0004852 Sechium edule HOM05D000519 ORTHO05D000959 6.1e-06 54.7 84 36.9
vmacro15764 Vaccinium macrocarpon HOM05D000519 ORTHO05D000959 6.1e-06 54.7 121 36.4
HPP92_024485 Vanilla planifolia HOM05D000519 ORTHO05D000959 6.1e-06 54.7 121 37.2
CAN.G1529.1 Capsicum annuum HOM05D000519 ORTHO05D000959 8.0e-06 54.3 96 39.6
CARHR126700 Cardamine hirsuta HOM05D000519 ORTHO05D000959 8.0e-06 54.3 82 40.2
Cfa000088 Carpinus fangiana HOM05D000519 ORTHO05D000959 8.0e-06 54.3 76 44.7
Ca_21039_v3 Cicer arietinum L. HOM05D000519 ORTHO05D000959 8.0e-06 54.3 81 37.0
Psat1g199880 Pisum sativum HOM05D000519 ORTHO05D000959 8.0e-06 54.3 76 40.8


User provided reference genes

Program Settings