Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold49G18223 Striga asiatica HOM05D003761 ORTHO05D004412 2.0e-109 399.1 198 100.0
MSTRG.14590 Avicennia marina HOM05D003761 ORTHO05D004412 2.6e-48 196.1 182 56.0
MSTRG.13107 Avicennia marina HOM05D003761 ORTHO05D004412 5.7e-43 178.3 193 49.2
Migut.H01629 Erythranthe guttata HOM05D003761 ORTHO05D004412 1.3e-42 177.2 197 48.2
MSTRG.7132 Avicennia marina HOM05D003761 ORTHO05D004412 6.5e-39 164.9 175 48.6
SGA_v2.0_scaffold186G40120 Striga asiatica HOM05D003761 ORTHO05D004412 4.2e-38 162.2 168 50.6
Actinidia39257 Actinidia chinensis HOM05D003761 ORTHO05D004412 4.4e-35 152.1 172 44.2
SGA_v2.0_scaffold7G03701 Striga asiatica HOM05D003761 ORTHO05D004412 3.7e-34 149.1 165 46.1
Oeu057021.1 Olea europaea HOM05D003761 ORTHO05D004412 3.1e-33 146.0 132 53.8
Dinv15342 Davidia involucrata HOM05D003761 ORTHO05D004412 7.0e-33 144.8 146 49.3
Lsat_1_v5_gn_1_130120 Lactuca sativa HOM05D003761 ORTHO05D004412 1.7e-31 140.2 166 46.4
Rhsim13G0141000 Rhododendron simsii HOM05D003761 ORTHO05D004412 3.8e-31 139.0 188 42.0
Cpa.g.sc27.232 Carica papaya HOM05D003761 ORTHO05D004412 5.0e-31 138.7 133 50.4
Oeu025960.1 Olea europaea HOM05D003761 ORTHO05D004412 1.5e-30 137.1 170 43.5
Hma1.2p1_1175F.1_g263990 Hydrangea macrophylla HOM05D003761 ORTHO05D004412 1.9e-30 136.7 163 46.0
Lsat_1_v5_gn_7_13080 Lactuca sativa HOM05D003761 ORTHO05D004412 2.5e-30 136.3 178 42.1
ECA248G3040 Erigeron canadensis HOM05D003761 ORTHO05D004412 3.2e-30 136.0 163 42.9
vmacro03611 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 4.2e-30 135.6 148 48.0
vmacro23224 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 4.2e-30 135.6 148 48.0
Lj2C256G8 Lonicera japonica HOM05D003761 ORTHO05D004412 5.5e-30 135.2 169 45.0
Actinidia11903 Actinidia chinensis HOM05D003761 ORTHO05D004412 9.4e-30 134.4 190 40.5
CSS0009294 Camellia sinensis var. sinensis HOM05D003761 ORTHO05D004412 9.4e-30 134.4 150 46.7
CSS0045719 Camellia sinensis var. sinensis HOM05D003761 ORTHO05D004412 9.4e-30 134.4 150 46.7
Oeu025400.1 Olea europaea HOM05D003761 ORTHO05D004412 9.4e-30 134.4 147 49.7
AL8G10320 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 1.6e-29 133.7 161 44.1
Sopen11g006960 Solanum pennellii HOM05D003761 ORTHO05D004412 1.6e-29 133.7 145 46.9
CAN.G1186.30 Capsicum annuum HOM05D003761 ORTHO05D004412 2.1e-29 133.3 169 42.0
unitig_52.g17560 Utricularia gibba HOM05D003761 ORTHO05D004412 2.1e-29 133.3 188 39.9
vmacro03612 Vaccinium macrocarpon HOM05D003761 ORTHO05D004412 2.1e-29 133.3 184 41.3
Migut.M01442 Erythranthe guttata HOM05D003761 ORTHO05D004412 2.7e-29 132.9 171 49.1
SalBow8G1906 Salvia bowleyana HOM05D003761 ORTHO05D004412 3.6e-29 132.5 154 47.4
CARHR173680 Cardamine hirsuta HOM05D003761 ORTHO05D004412 4.7e-29 132.1 133 47.4
PGR042G2523 Punica granatum HOM05D003761 ORTHO05D004412 4.7e-29 132.1 170 42.4
AUR62021816 Chenopodium quinoa HOM05D003761 ORTHO05D004412 8.0e-29 131.3 156 46.2
Eucgr.L00155 Eucalyptus grandis HOM05D003761 ORTHO05D004412 8.0e-29 131.3 165 44.2
MBI18_g42884_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 8.0e-29 131.3 177 41.2
Oeu002779.1 Olea europaea HOM05D003761 ORTHO05D004412 8.0e-29 131.3 193 39.9
Sc24g0000400 Simmondsia chinensis HOM05D003761 ORTHO05D004412 8.0e-29 131.3 145 49.0
AT5G47635 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 1.4e-28 130.6 161 44.1
Sabra06G0004500 Salix brachista HOM05D003761 ORTHO05D004412 1.4e-28 130.6 175 42.3
Haze_07014 Corylus avellana HOM05D003761 ORTHO05D004412 1.8e-28 130.2 165 41.2
HanXRQChr01g0003591 Helianthus annuus HOM05D003761 ORTHO05D004412 1.8e-28 130.2 152 42.8
Potri.006G005600 Populus trichocarpa HOM05D003761 ORTHO05D004412 1.8e-28 130.2 168 44.0
Carub.0008s0015 Capsella rubella HOM05D003761 ORTHO05D004412 3.0e-28 129.4 132 47.0
AUR62012843 Chenopodium quinoa HOM05D003761 ORTHO05D004412 3.0e-28 129.4 157 45.9
DCAR_030834 Daucus carota HOM05D003761 ORTHO05D004412 4.0e-28 129.0 174 42.0
Ciclev10016770m.g Citrus clementina HOM05D003761 ORTHO05D004412 5.2e-28 128.6 161 43.5
CiPaw.09G108600 Carya illinoinensis HOM05D003761 ORTHO05D004412 1.5e-27 127.1 154 43.5
Eucgr.L00154 Eucalyptus grandis HOM05D003761 ORTHO05D004412 2.0e-27 126.7 165 42.4
Manes.09G083000 Manihot esculenta HOM05D003761 ORTHO05D004412 2.0e-27 126.7 169 43.2
TAR626G0912 Trochodendron aralioides HOM05D003761 ORTHO05D004412 2.0e-27 126.7 170 42.4
Aa31LG9G5380 Aethionema arabicum HOM05D003761 ORTHO05D004412 2.6e-27 126.3 164 41.5
Aqoxy4G01086 Aquilegia oxysepala HOM05D003761 ORTHO05D004412 3.3e-27 125.9 167 40.7
Sp2g12340 Schrenkiella parvula HOM05D003761 ORTHO05D004412 3.3e-27 125.9 152 43.4
Cfa000041 Carpinus fangiana HOM05D003761 ORTHO05D004412 4.4e-27 125.6 165 40.0
Cc09_g00350 Coffea canephora HOM05D003761 ORTHO05D004412 4.4e-27 125.6 140 48.6
Solyc11g012170.1 Solanum lycopersicum HOM05D003761 ORTHO05D004412 5.7e-27 125.2 139 47.5
Eucgr.E03855 Eucalyptus grandis HOM05D003761 ORTHO05D004412 7.5e-27 124.8 147 45.6
CANSAT56G1869 Cannabis sativa HOM05D003761 ORTHO05D004412 9.7e-27 124.4 156 39.7
Potri.016G006200 Populus trichocarpa HOM05D003761 ORTHO05D004412 1.3e-26 124.0 169 41.4
THA.LOC104806736 Tarenaya hassleriana HOM05D003761 ORTHO05D004412 1.3e-26 124.0 131 45.0
Thhalv10001056m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 1.7e-26 123.6 136 46.3
PGSC0003DMG400013274 Solanum tuberosum HOM05D003761 ORTHO05D004412 1.7e-26 123.6 139 46.8
BcaC06g31357 Brassica carinata HOM05D003761 ORTHO05D004412 2.2e-26 123.2 136 46.3
Duzib192G0597 Durio zibethinus HOM05D003761 ORTHO05D004412 2.2e-26 123.2 164 40.2
BcaC04g21612 Brassica carinata HOM05D003761 ORTHO05D004412 2.8e-26 122.9 157 42.0
C09p29870 Brassica napus HOM05D003761 ORTHO05D004412 2.8e-26 122.9 157 42.0
Nn1g07502 Nelumbo nucifera HOM05D003761 ORTHO05D004412 2.8e-26 122.9 153 43.8
Actinidia02285 Actinidia chinensis HOM05D000829 ORTHO05D000690 4.8e-26 122.1 147 44.2
PGR004G2813 Punica granatum HOM05D003761 ORTHO05D004412 6.3e-26 121.7 186 42.5
Thecc.06G240300 Theobroma cacao HOM05D003761 ORTHO05D004412 1.1e-25 120.9 153 41.8
HanXRQChr15g0470241 Helianthus annuus HOM05D003761 ORTHO05D004412 1.4e-25 120.6 134 48.5
Atru.chr1.2273 Acer truncatum HOM05D003761 ORTHO05D004412 1.8e-25 120.2 173 39.3
Peaxi162Scf00558g00515 Petunia axillaris HOM05D003761 ORTHO05D004412 1.8e-25 120.2 159 42.8
A09p23140 Brassica napus HOM05D003761 ORTHO05D004412 3.1e-25 119.4 153 43.8
BraA09t37917Z Brassica rapa HOM05D003761 ORTHO05D004412 3.1e-25 119.4 153 43.8
Nitab4.5_0000143g0280 Nicotiana tabacum HOM05D003761 ORTHO05D004412 3.1e-25 119.4 145 43.4
Prupe.4G004300 Prunus persica HOM05D003761 ORTHO05D004412 3.1e-25 119.4 142 46.5
QL05p067831 Quercus lobata HOM05D003761 ORTHO05D004412 3.1e-25 119.4 166 39.2
GSVIVG01005138001 Vitis vinifera HOM05D003761 ORTHO05D004412 3.1e-25 119.4 135 48.9
Glyma.17G005900 Glycine max HOM05D003761 ORTHO05D004412 4.1e-25 119.0 162 43.2
Gohir.D06G217400 Gossypium hirsutum HOM05D003761 ORTHO05D004412 4.1e-25 119.0 161 40.4
COL.COLO4_31936 Corchorus olitorius HOM05D003761 ORTHO05D004412 5.3e-25 118.6 126 45.2
Lj6g0023004 Lotus japonicus HOM05D003761 ORTHO05D004412 5.3e-25 118.6 165 38.8
MBI18_g27019_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 5.3e-25 118.6 143 41.3
BcaB07g30768 Brassica carinata HOM05D003761 ORTHO05D004412 7.0e-25 118.2 132 47.0
BcaC09g50449 Brassica carinata HOM05D003761 ORTHO05D004412 7.0e-25 118.2 131 46.6
C01p25300 Brassica napus HOM05D003761 ORTHO05D004412 7.0e-25 118.2 131 46.6
BolC1t02480H Brassica oleracea HOM05D003761 ORTHO05D004412 7.0e-25 118.2 131 46.6
Ca_20995_v3 Cicer arietinum L. HOM05D003761 ORTHO05D004412 7.0e-25 118.2 145 46.2
Gohir.A06G204100 Gossypium hirsutum HOM05D003761 ORTHO05D004412 7.0e-25 118.2 155 41.9
Medtr4g133932 Medicago truncatula HOM05D003761 ORTHO05D004412 7.0e-25 118.2 148 46.6
BraA01t01941Z Brassica rapa HOM05D003761 ORTHO05D004412 9.1e-25 117.9 139 45.3
CDE10G1059 Ceratophyllum demersum HOM05D003761 ORTHO05D004412 1.2e-24 117.5 149 40.9
Gorai.010G248800 Gossypium raimondii HOM05D003761 ORTHO05D004412 1.2e-24 117.5 161 40.4
BolC4t28284H Brassica oleracea HOM05D003761 ORTHO05D004412 1.6e-24 117.1 162 40.7
EL10Ac8g20260 Beta vulgaris HOM05D003761 ORTHO05D004412 2.7e-24 116.3 177 40.7
A06p44900 Brassica napus HOM05D003761 ORTHO05D004412 2.7e-24 116.3 153 42.5
BraA06t27361Z Brassica rapa HOM05D003761 ORTHO05D004412 2.7e-24 116.3 153 42.5
Sabra16G0011000 Salix brachista HOM05D003761 ORTHO05D004412 3.5e-24 115.9 131 45.8
VMungo1215G0779 Vigna mungo HOM05D003761 ORTHO05D004412 4.5e-24 115.5 155 40.6
C07p31280 Brassica napus HOM05D003761 ORTHO05D004412 5.9e-24 115.2 166 41.6
BolC7t43669H Brassica oleracea HOM05D003761 ORTHO05D004412 5.9e-24 115.2 132 45.5
PSO541G3650 Papaver somniferum HOM05D003761 ORTHO05D004412 5.9e-24 115.2 161 40.4
PSO675G1588 Papaver somniferum HOM05D003761 ORTHO05D004412 5.9e-24 115.2 182 37.4
Psat4g002880 Pisum sativum HOM05D003761 ORTHO05D004412 5.9e-24 115.2 165 44.2
CARHR223820 Cardamine hirsuta HOM05D003761 ORTHO05D004412 7.7e-24 114.8 131 44.3
BcaC02g07354 Brassica carinata HOM05D003761 ORTHO05D004412 1.0e-23 114.4 160 40.6
Phvul.003G086700 Phaseolus vulgaris HOM05D003761 ORTHO05D004412 1.0e-23 114.4 158 39.2
BcaB02g09051 Brassica carinata HOM05D003761 ORTHO05D004412 1.3e-23 114.0 155 43.2
PGSC0003DMG400013298 Solanum tuberosum HOM05D003761 ORTHO05D004412 1.7e-23 113.6 166 42.2
Lalb_Chr15g0088211 Lupinus albus HOM05D003761 ORTHO05D004412 2.2e-23 113.2 163 40.5
MD05G1360900 Malus domestica HOM05D003761 ORTHO05D004412 2.2e-23 113.2 146 43.2
MD10G1338600 Malus domestica HOM05D003761 ORTHO05D004412 2.2e-23 113.2 148 43.9
Lj4g0001357 Lotus japonicus HOM05D003761 ORTHO05D004412 2.9e-23 112.8 166 41.6
TPR.G5987 Trifolium pratense HOM05D003761 ORTHO05D004412 3.8e-23 112.5 169 42.6
BcaB02g09050 Brassica carinata HOM05D003761 ORTHO05D004412 5.0e-23 112.1 157 42.7
BolC4t22355H Brassica oleracea HOM05D003761 ORTHO05D004412 6.5e-23 111.7 163 41.7
BraA05t19604Z Brassica rapa HOM05D003761 ORTHO05D004412 6.5e-23 111.7 163 41.7
Carub.0004s2229 Capsella rubella HOM05D003761 ORTHO05D004412 6.5e-23 111.7 153 42.5
FAN25G2178 Fragaria x ananassa HOM05D003761 ORTHO05D004412 6.5e-23 111.7 165 38.8
AT4G17215 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 8.5e-23 111.3 142 40.1
Sopen11g007440 Solanum pennellii HOM05D003761 ORTHO05D004412 1.1e-22 110.9 165 40.0
A03p50350 Brassica napus HOM05D003761 ORTHO05D004412 1.5e-22 110.5 131 44.3
A05p06360 Brassica napus HOM05D003761 ORTHO05D004412 1.5e-22 110.5 163 41.1
BraA03t14124Z Brassica rapa HOM05D003761 ORTHO05D004412 1.5e-22 110.5 131 44.3
Sp4g22430 Schrenkiella parvula HOM05D003761 ORTHO05D004412 1.5e-22 110.5 134 44.8
Carub.0007s2420 Capsella rubella HOM05D003761 ORTHO05D004412 1.9e-22 110.2 131 42.7
BcaNung03472 Brassica carinata HOM05D003761 ORTHO05D004412 2.5e-22 109.8 132 43.2
Solyc11g012705.2 Solanum lycopersicum HOM05D003761 ORTHO05D004412 2.5e-22 109.8 165 40.0
Aa31LG5G19480 Aethionema arabicum HOM05D003761 ORTHO05D004412 3.2e-22 109.4 135 43.0
BcaB06g29129 Brassica carinata HOM05D003761 ORTHO05D004412 4.2e-22 109.0 134 44.0
BcaC06g33549 Brassica carinata HOM05D003761 ORTHO05D004412 4.2e-22 109.0 131 44.3
A04p30050 Brassica napus HOM05D003761 ORTHO05D004412 4.2e-22 109.0 160 40.6
C07p48660 Brassica napus HOM05D003761 ORTHO05D004412 4.2e-22 109.0 131 44.3
BolC7t45373H Brassica oleracea HOM05D003761 ORTHO05D004412 4.2e-22 109.0 131 44.3
Thhalv10017342m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 4.2e-22 109.0 134 42.5
AL4G37770 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 7.2e-22 108.2 159 41.5
AT2G40113 Arabidopsis thaliana HOM05D003761 ORTHO05D004412 7.2e-22 108.2 161 40.4
BraA04t18501Z Brassica rapa HOM05D003761 ORTHO05D004412 7.2e-22 108.2 160 40.6
Thhalv10026465m.g Eutrema salsugineum HOM05D003761 ORTHO05D004412 7.2e-22 108.2 131 43.5
Peaxi162Scf00442g00073 Petunia axillaris HOM05D003761 ORTHO05D004412 7.2e-22 108.2 151 43.0
FvH4_3g00370 Fragaria vesca HOM05D003761 ORTHO05D004412 9.4e-22 107.8 163 38.0
Lalb_Chr13g0304361 Lupinus albus HOM05D003761 ORTHO05D004412 9.4e-22 107.8 138 42.0
AL7G37500 Arabidopsis lyrata HOM05D003761 ORTHO05D004412 1.2e-21 107.5 142 39.4
Sp7g16980 Schrenkiella parvula HOM05D003761 ORTHO05D004412 1.2e-21 107.5 131 44.3
BcaC06g34236 Brassica carinata HOM05D003761 ORTHO05D004412 1.6e-21 107.1 146 42.5
THA.LOC104798379 Tarenaya hassleriana HOM05D003761 ORTHO05D004412 2.1e-21 106.7 155 38.7
CAN.G1156.14 Capsicum annuum HOM05D003761 ORTHO05D004412 2.7e-21 106.3 168 36.9
CsaV3_1G015780 Cucumis sativus L. HOM05D003761 ORTHO05D004412 2.7e-21 106.3 147 38.8
CsaV3_UNG065500 Cucumis sativus L. HOM05D003761 ORTHO05D004412 2.7e-21 106.3 147 38.8
HPP92_024936 Vanilla planifolia HOM05D003761 ORTHO05D004412 2.7e-21 106.3 129 41.9
FAN21G2431 Fragaria x ananassa HOM05D003761 ORTHO05D004412 3.6e-21 105.9 162 37.7
MBI19_g14888_MAGBIO Magnolia biondii HOM05D003761 ORTHO05D004412 3.6e-21 105.9 124 42.7
MELO3C025526.2 Cucumis melo HOM05D003761 ORTHO05D004412 6.1e-21 105.1 142 39.4
TWI38G2030 Tripterygium wilfordii HOM05D003761 ORTHO05D004412 6.1e-21 105.1 203 34.0
HPP92_024932 Vanilla planifolia HOM05D003761 ORTHO05D004412 6.1e-21 105.1 129 41.1
arahy.Tifrunner.gnm1.ann1.YY2BB8 Arachis hypogaea HOM05D003761 ORTHO05D004412 1.0e-20 104.4 169 37.3
Nitab4.5_0001198g0070 Nicotiana tabacum HOM05D003761 ORTHO05D004412 1.4e-20 104.0 163 38.7
BcaNung03474 Brassica carinata HOM05D003761 ORTHO05D004412 1.8e-20 103.6 131 42.0
CARHR135090 Cardamine hirsuta HOM05D003761 ORTHO05D004412 3.0e-20 102.8 135 42.2
Sed0014180 Sechium edule HOM05D003761 ORTHO05D004412 5.2e-20 102.1 181 34.8
arahy.Tifrunner.gnm1.ann1.UZ71G8 Arachis hypogaea HOM05D003761 ORTHO05D004412 8.8e-20 101.3 168 36.9
Sed0021615 Sechium edule HOM05D003761 ORTHO05D004412 8.8e-20 101.3 141 37.6
ClCG01G010750 Citrullus lanatus HOM05D003761 ORTHO05D004412 2.6e-19 99.8 146 36.3
Ah.09g233900 Amaranthus hybridus HOM05D003761 ORTHO05D004412 9.8e-19 97.8 135 42.2
TWI38G1412 Tripterygium wilfordii HOM05D003761 ORTHO05D004412 9.8e-19 97.8 190 33.7
BcaNung00112 Brassica carinata HOM05D003761 ORTHO05D004412 3.7e-18 95.9 122 41.0
Aa31LG2G12410 Aethionema arabicum HOM05D003761 ORTHO05D004412 6.3e-18 95.1 158 32.3
Hma1.2p1_1175F.1_g263980 Hydrangea macrophylla HOM05D003761 ORTHO05D004412 8.3e-18 94.7 110 45.5
Os10g0208600 Oryza sativa ssp. japonica HOM05D003761 ORTHO05D004412 1.1e-17 94.4 137 40.1
Zm00001eb050510 Zea mays HOM05D003761 ORTHO05D004412 1.8e-17 93.6 144 37.5
ATR0827G170 Amborella trichopoda HOM05D003761 ORTHO05D004412 2.9e-15 86.3 154 33.1
BolC9t55850H Brassica oleracea HOM05D003761 ORTHO05D004412 7.2e-14 81.6 96 43.8
Os10g0206500 Oryza sativa ssp. japonica HOM05D003761 ORTHO05D004412 7.2e-14 81.6 170 32.9
Sc05g0009870 Simmondsia chinensis HOM05D003761 ORTHO05D004412 9.4e-14 81.3 93 46.2
Cpa.g.sc27.234 Carica papaya HOM05D003761 ORTHO05D004412 2.7e-13 79.7 90 43.3
C04p67800 Brassica napus HOM05D003761 ORTHO05D004412 2.8e-10 69.7 77 48.1
SEGI_00399 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 2.4e-09 66.6 130 33.1


User provided reference genes

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