Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold49G18211 Striga asiatica HOM05D007449 ORTHO05D009504 1.4e-87 326.2 165 100.0
Migut.H01650 Erythranthe guttata HOM05D007449 ORTHO05D009504 2.1e-75 285.8 166 87.3
MSTRG.13092 Avicennia marina HOM05D007449 ORTHO05D009504 1.4e-71 273.1 165 84.2
CAN.G222.124 Capsicum annuum HOM05D007449 ORTHO05D009504 5.7e-65 251.1 165 77.0
Aqoxy5G02136 Aquilegia oxysepala HOM05D007449 ORTHO05D009504 8.3e-64 247.3 158 75.9
Oeu002792.1 Olea europaea HOM05D007449 ORTHO05D009775 2.4e-63 245.7 165 75.2
ECA236G3627 Erigeron canadensis HOM05D007449 ORTHO05D009504 3.2e-63 245.4 154 78.6
GSVIVG01036691001 Vitis vinifera HOM05D007449 ORTHO05D009504 2.0e-62 242.7 164 75.6
HanXRQChr11g0335831 Helianthus annuus HOM05D007449 ORTHO05D009504 5.9e-62 241.1 156 76.3
PGSC0003DMG400013314 Solanum tuberosum HOM05D007449 ORTHO05D009504 5.9e-62 241.1 153 79.1
Nn1g09860 Nelumbo nucifera HOM05D007449 ORTHO05D009504 1.0e-61 240.4 153 77.8
Dinv42450 Davidia involucrata HOM05D007449 ORTHO05D009504 2.3e-61 239.2 154 77.3
Peaxi162Scf00124g01733 Petunia axillaris HOM05D007449 ORTHO05D009504 3.0e-61 238.8 162 73.5
Sopen11g006460 Solanum pennellii HOM05D007449 ORTHO05D009504 3.9e-61 238.4 165 73.9
COL.COLO4_32270 Corchorus olitorius HOM05D007449 ORTHO05D009504 8.6e-61 237.3 154 73.4
Nitab4.5_0006598g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 8.6e-61 237.3 158 74.7
Solyc11g011620.3 Solanum lycopersicum HOM05D007449 ORTHO05D009504 1.1e-60 236.9 151 78.1
Nitab4.5_0005124g0020 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.5e-60 236.5 158 74.7
ClCG02G018850 Citrullus lanatus HOM05D007449 ORTHO05D009504 1.9e-60 236.1 161 70.8
Hma1.2p1_1417F.1_g282110 Hydrangea macrophylla HOM05D007449 ORTHO05D009504 1.9e-60 236.1 163 72.4
Potri.010G175600 Populus trichocarpa HOM05D007449 ORTHO05D009504 1.9e-60 236.1 159 70.4
Lsat_1_v5_gn_7_111001 Lactuca sativa HOM05D007449 ORTHO05D009504 2.5e-60 235.7 153 77.1
CSS0049228 Camellia sinensis var. sinensis HOM05D007449 ORTHO05D009504 4.3e-60 235.0 158 73.4
Manes.16G050159 Manihot esculenta HOM05D007449 ORTHO05D009504 5.6e-60 234.6 162 70.4
Glyma.08G160000 Glycine max HOM05D007449 ORTHO05D009504 7.3e-60 234.2 161 72.0
Sabra10G0135300 Salix brachista HOM05D007449 ORTHO05D009504 7.3e-60 234.2 159 70.4
Solyc11g011610.2 Solanum lycopersicum HOM05D007449 ORTHO05D009504 7.3e-60 234.2 153 77.1
MBI02_g42634_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 9.5e-60 233.8 155 75.5
Os01g0679600 Oryza sativa ssp. japonica HOM05D007449 ORTHO05D009504 1.2e-59 233.4 154 72.1
Ciclev10006094m.g Citrus clementina HOM05D007449 ORTHO05D009504 1.6e-59 233.0 156 73.1
Glyma.15G266900 Glycine max HOM05D007449 ORTHO05D009504 1.6e-59 233.0 161 72.0
MD05G1240900 Malus domestica HOM05D007449 ORTHO05D009504 1.6e-59 233.0 163 71.2
TWI38G0722 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 1.6e-59 233.0 162 68.5
TWI38G2117 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 1.6e-59 233.0 162 68.5
FAN11G1945 Fragaria x ananassa HOM05D007449 ORTHO05D009504 4.7e-59 231.5 154 72.7
RcHm_v2.0_Chr5g0022981 Rosa chinensis HOM05D007449 ORTHO05D009504 4.7e-59 231.5 157 72.6
CsaV3_6G013330 Cucumis sativus L. HOM05D007449 ORTHO05D009504 6.2e-59 231.1 155 73.5
Nitab4.5_0001438g0030 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.0e-58 230.3 158 72.2
FAN16G1652 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.4e-58 229.9 154 72.1
Sed0001463 Sechium edule HOM05D007449 ORTHO05D009504 1.4e-58 229.9 164 70.7
Zm00001eb156770 Zea mays HOM05D007449 ORTHO05D009504 1.8e-58 229.6 159 68.6
ATR0109G018 Amborella trichopoda HOM05D007449 ORTHO05D009504 2.3e-58 229.2 157 73.2
FvH4_3g13790 Fragaria vesca HOM05D007449 ORTHO05D009504 4.0e-58 228.4 154 72.7
FAN21G0170 Fragaria x ananassa HOM05D007449 ORTHO05D009504 4.0e-58 228.4 154 72.7
arahy.Tifrunner.gnm1.ann1.4RN51I Arachis hypogaea HOM05D007449 ORTHO05D009504 5.2e-58 228.0 153 72.5
arahy.Tifrunner.gnm1.ann1.VWXD6N Arachis hypogaea HOM05D007449 ORTHO05D009504 5.2e-58 228.0 153 72.5
MELO3C019608.2 Cucumis melo HOM05D007449 ORTHO05D009504 6.8e-58 227.6 159 71.7
THA.LOC104812400 Tarenaya hassleriana HOM05D007449 ORTHO05D009504 1.2e-57 226.9 153 72.5
Gohir.D13G131200 Gossypium hirsutum HOM05D007449 ORTHO05D009504 1.5e-57 226.5 154 72.1
Gohir.A13G127500 Gossypium hirsutum HOM05D007449 ORTHO05D009504 2.0e-57 226.1 154 72.1
Lalb_Chr01g0015631 Lupinus albus HOM05D007449 ORTHO05D009504 2.6e-57 225.7 161 68.9
SEGI_20644 Sequoiadendron giganteum HOM05D007449 ORTHO05D009504 3.4e-57 225.3 153 70.6
CDE02G1458 Ceratophyllum demersum HOM05D001125 ORTHO05D003189 4.4e-57 224.9 154 71.4
Cc08_g13080 Coffea canephora HOM05D007449 ORTHO05D009504 4.4e-57 224.9 155 72.9
Duzib213G0878 Durio zibethinus HOM05D007449 ORTHO05D009504 4.4e-57 224.9 153 71.9
Psat6g047080 Pisum sativum HOM05D007449 ORTHO05D009504 4.4e-57 224.9 163 68.7
Prupe.4G124700 Prunus persica HOM05D007449 ORTHO05D009504 5.8e-57 224.6 154 72.1
Rhsim10G0133000 Rhododendron simsii HOM05D007449 ORTHO05D009504 5.8e-57 224.6 201 61.2
Gorai.013G147200 Gossypium raimondii HOM05D007449 ORTHO05D009504 9.8e-57 223.8 154 71.4
CANSAT56G2387 Cannabis sativa HOM05D007449 ORTHO05D009504 1.7e-56 223.0 153 71.2
CiPaw.15G111100 Carya illinoinensis HOM05D007449 ORTHO05D009504 3.7e-56 221.9 162 66.7
Atru.chr1.9 Acer truncatum HOM05D007449 ORTHO05D009504 6.4e-56 221.1 153 70.6
Medtr1g046590 Medicago truncatula HOM05D007449 ORTHO05D009504 1.1e-55 220.3 161 68.9
Thhalv10019230m.g Eutrema salsugineum HOM05D007449 ORTHO05D009504 1.9e-55 219.5 159 68.6
Cfa017774 Carpinus fangiana HOM05D007449 ORTHO05D009504 2.4e-55 219.2 152 68.4
TPR.G11303 Trifolium pratense HOM05D007449 ORTHO05D009504 4.1e-55 218.4 163 66.9
AT1G79260 Arabidopsis thaliana HOM05D007449 ORTHO05D009504 7.0e-55 217.6 162 67.9
AL2G39860 Arabidopsis lyrata HOM05D007449 ORTHO05D009504 6.0e-54 214.5 164 67.1
C02p36470 Brassica napus HOM05D007449 ORTHO05D009504 1.3e-53 213.4 154 66.9
BcaB05g25191 Brassica carinata HOM05D007449 ORTHO05D009504 1.7e-53 213.0 153 68.0
BcaC03g15880 Brassica carinata HOM05D007449 ORTHO05D009504 1.7e-53 213.0 154 66.9
Carub.0002s2613 Capsella rubella HOM05D007449 ORTHO05D009504 1.7e-53 213.0 163 66.3
BolC2t09646H Brassica oleracea HOM05D007449 ORTHO05D009504 8.6e-53 210.7 153 66.0
HPP92_008133 Vanilla planifolia HOM05D007449 ORTHO05D009504 8.6e-53 210.7 162 68.5
BraA02t07273Z Brassica rapa HOM05D007449 ORTHO05D009504 1.1e-52 210.3 153 66.7
HPP92_008185 Vanilla planifolia HOM05D007449 ORTHO05D009504 1.1e-52 210.3 162 68.5
Sp5g34340 Schrenkiella parvula HOM05D007449 ORTHO05D009504 1.9e-52 209.5 149 69.1
AagrBONN_evm.TU.Sc2ySwM_362.2319 Anthoceros agrestis HOM05D007449 ORTHO05D009504 5.6e-52 208.0 152 65.8
A02p22730 Brassica napus HOM05D007449 ORTHO05D009504 9.5e-52 207.2 153 66.0
vmacro12790 Vaccinium macrocarpon HOM05D007449 ORTHO05D009504 6.2e-51 204.5 230 52.2
Aa31LG4G1730 Aethionema arabicum HOM05D007449 ORTHO05D009504 4.0e-50 201.8 177 57.6
PGR031G0327 Punica granatum HOM05D007449 ORTHO05D009504 6.8e-50 201.1 161 63.4
Eucgr.F04482 Eucalyptus grandis HOM05D007449 ORTHO05D009504 1.2e-49 200.3 151 64.9
Phvul.005G043600 Phaseolus vulgaris HOM05D007449 ORTHO05D009504 7.5e-49 197.6 161 64.6
Actinidia33338 Actinidia chinensis HOM05D007449 ORTHO05D009504 2.9e-48 195.7 133 73.7
Nitab4.5_0009898g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 7.1e-47 191.0 158 64.6
Mapoly0054s0111 Marchantia polymorpha HOM05D007449 ORTHO05D009504 9.2e-47 190.7 151 61.6
QL04p096242 Quercus lobata HOM05D007449 ORTHO05D009504 2.3e-45 186.0 115 75.7
SMO364G0724 Selaginella moellendorffii HOM05D007449 ORTHO05D009504 2.3e-45 186.0 155 61.3
QL04p096050 Quercus lobata HOM05D007449 ORTHO05D009504 6.6e-45 184.5 114 75.4
arahy.Tifrunner.gnm1.ann1.FIRH26 Arachis hypogaea HOM05D007449 ORTHO05D009504 1.5e-44 183.3 117 72.6
TAR629G0115 Trochodendron aralioides HOM05D007449 ORTHO05D009504 1.5e-44 183.3 111 82.0
Haze_18462 Corylus avellana HOM05D007449 ORTHO05D009504 1.3e-40 170.2 115 68.7
Pp3c6_12570 Physcomitrium patens HOM05D007449 ORTHO05D009504 1.4e-39 166.8 123 66.7
FAN25G3406 Fragaria x ananassa HOM05D007449 ORTHO05D009504 2.3e-37 159.5 108 72.2
Ca_03327_v3 Cicer arietinum L. HOM05D007449 ORTHO05D009504 3.0e-37 159.1 110 72.7
DCAR_013701 Daucus carota HOM05D007449 ORTHO05D009504 1.6e-35 153.3 90 78.9
MBI02_g17887_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 3.6e-35 152.1 155 57.4
Lj2A6T27 Lonicera japonica HOM05D007449 ORTHO05D009504 3.4e-33 145.6 90 76.7
Nitab4.5_0001650g0100 Nicotiana tabacum HOM05D000057 ORTHO05D000021 1.3e-24 117.1 75 77.3
Aa31LG4G1740 Aethionema arabicum HOM05D007449 ORTHO05D009504 1.9e-23 113.2 161 42.2
Nitab4.5_0007284g0070 Nicotiana tabacum HOM05D000057 ORTHO05D000021 1.8e-18 96.7 63 76.2
MBI02_g30541_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 7.9e-14 81.3 82 59.8
TPR.G35695 Trifolium pratense HOM05D000290 ORTHO05D044376 5.1e-13 78.6 65 64.6
Glyma.14G034600 Glycine max HOM05D007449 ORTHO05D009504 1.4e-10 70.5 72 47.2
Gohir.D03G088000 Gossypium hirsutum HOM05D007449 ORTHO05D000032 1.8e-10 70.1 53 66.0


User provided reference genes

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