Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold49G18208 Striga asiatica HOM05D000040 ORTHO05D406019 3.0e-130 468.4 219 100.0
SGA_v2.0_scaffold49G18209 Striga asiatica HOM05D000040 ORTHO05D005442 1.6e-30 137.1 238 37.8
HPP92_020194 Vanilla planifolia HOM05D000040 ORTHO05D005442 9.1e-18 94.7 227 34.4
Thhalv10020732m.g Eutrema salsugineum HOM05D000040 ORTHO05D005442 4.5e-17 92.4 212 33.0
RcHm_v2.0_Chr7g0239861 Rosa chinensis HOM05D000040 ORTHO05D005442 5.9e-17 92.0 231 33.3
Sp3g10860 Schrenkiella parvula HOM05D000040 ORTHO05D005442 5.9e-17 92.0 227 32.6
BcaB04g18716 Brassica carinata HOM05D000040 ORTHO05D005442 7.7e-17 91.7 224 31.7
Migut.M01492 Erythranthe guttata HOM05D000040 ORTHO05D005442 7.7e-17 91.7 211 35.5
MSTRG.14573 Avicennia marina HOM05D000040 ORTHO05D005442 2.9e-16 89.7 228 32.5
BNapus_Darmor_BZH_scaffold_149p00230 Brassica napus HOM05D000040 ORTHO05D005442 6.5e-16 88.6 213 33.3
BolC1t05185H Brassica oleracea HOM05D000040 ORTHO05D005442 6.5e-16 88.6 213 33.3
C01p52470 Brassica napus HOM05D000040 ORTHO05D005442 1.5e-15 87.4 214 34.1
BraA01t04114Z Brassica rapa HOM05D000040 ORTHO05D005442 2.5e-15 86.7 213 33.3
CANSAT56G0190 Cannabis sativa HOM05D000040 ORTHO05D005442 3.2e-15 86.3 230 30.0
Oeu029456.1 Olea europaea HOM05D000040 ORTHO05D005442 7.2e-15 85.1 230 32.6
TAR627G0410 Trochodendron aralioides HOM05D000040 ORTHO05D005442 7.2e-15 85.1 229 32.3
MD10G1219200 Malus domestica HOM05D000040 ORTHO05D005442 9.5e-15 84.7 228 30.7
Zm00001eb295430 Zea mays HOM05D000040 ORTHO05D005442 1.6e-14 84.0 229 33.2
Oeu044442.1 Olea europaea HOM05D000040 ORTHO05D005442 6.1e-14 82.0 255 29.8
Eucgr.F04481 Eucalyptus grandis HOM05D000040 ORTHO05D005442 4.0e-13 79.3 231 31.6
HPP92_021501 Vanilla planifolia HOM05D000040 ORTHO05D005442 7.5e-12 75.1 224 30.8
HPP92_021518 Vanilla planifolia HOM05D000040 ORTHO05D005442 7.5e-12 75.1 224 30.8
AUR62039172 Chenopodium quinoa HOM05D000040 ORTHO05D005442 9.8e-12 74.7 219 28.8
Sopen01g040180 Solanum pennellii HOM05D000040 ORTHO05D002000 2.2e-11 73.6 213 29.6
FAN08G3134 Fragaria x ananassa HOM05D000040 ORTHO05D005442 4.9e-11 72.4 219 30.1
Oeu044630.1 Olea europaea HOM05D000040 ORTHO05D009156 4.9e-11 72.4 216 29.2
CAN.G1045.22 Capsicum annuum HOM05D000040 ORTHO05D002000 1.8e-10 70.5 213 29.6
Nitab4.5_0005808g0080 Nicotiana tabacum HOM05D000040 ORTHO05D002000 1.8e-10 70.5 213 28.6
Prupe.4G124800 Prunus persica HOM05D000040 ORTHO05D005442 1.8e-10 70.5 228 28.1
Duzib168G1205 Durio zibethinus HOM05D000040 ORTHO05D001305 5.4e-10 68.9 229 26.6
Nitab4.5_0003481g0010 Nicotiana tabacum HOM05D000040 ORTHO05D002000 5.4e-10 68.9 213 28.6
Duzib128G0170 Durio zibethinus HOM05D000040 ORTHO05D002000 7.0e-10 68.6 207 30.4
Nn1g09864 Nelumbo nucifera HOM05D000040 ORTHO05D005442 1.2e-09 67.8 235 28.5
PGSC0003DMG400005409 Solanum tuberosum HOM05D000040 ORTHO05D002000 1.6e-09 67.4 213 28.6
Medtr2g063110 Medicago truncatula HOM05D000040 ORTHO05D005442 2.0e-09 67.0 215 30.2
Zm00001eb329730 Zea mays HOM05D000040 ORTHO05D002000 2.7e-09 66.6 220 28.6
ECA236G1673 Erigeron canadensis HOM05D000040 ORTHO05D002000 3.5e-09 66.2 207 28.0
Lsat_1_v5_gn_7_31721 Lactuca sativa HOM05D000040 ORTHO05D002000 4.5e-09 65.9 207 28.0
Potri.003G195500 Populus trichocarpa HOM05D000040 ORTHO05D002000 4.5e-09 65.9 209 31.1
Psat3g110640 Pisum sativum HOM05D000040 ORTHO05D000267 5.9e-09 65.5 232 26.3
Sabra03G0145900 Salix brachista HOM05D000040 ORTHO05D002000 5.9e-09 65.5 226 28.8
Potri.001G028200 Populus trichocarpa HOM05D000040 ORTHO05D002000 7.8e-09 65.1 210 29.5
PSO384G0741 Papaver somniferum HOM05D000040 ORTHO05D000759 1.0e-08 64.7 223 27.8
Peaxi162Scf00082g00118 Petunia axillaris HOM05D000040 ORTHO05D002000 1.0e-08 64.7 213 28.6
BcaB08g37139 Brassica carinata HOM05D001112 ORTHO05D000996 1.3e-08 64.3 216 28.7
MSTRG.4806 Avicennia marina HOM05D000040 ORTHO05D000759 1.7e-08 63.9 220 25.5
HanXRQChr08g0214291 Helianthus annuus HOM05D000040 ORTHO05D009156 1.7e-08 63.9 242 27.3
SMO203G0268 Selaginella moellendorffii HOM05D000040 ORTHO05D000759 1.7e-08 63.9 200 28.0
SMO353G0284 Selaginella moellendorffii HOM05D000040 ORTHO05D000759 1.7e-08 63.9 210 27.6
BraA10t44735Z Brassica rapa HOM05D000040 ORTHO05D001305 2.3e-08 63.5 218 24.8
CANSAT64G1814 Cannabis sativa HOM05D000040 ORTHO05D005142 2.9e-08 63.2 229 29.3
Nn4g23716 Nelumbo nucifera HOM05D000040 ORTHO05D009156 2.9e-08 63.2 236 28.0
EL10Ac2g03242 Beta vulgaris HOM05D000040 ORTHO05D005442 3.8e-08 62.8 213 26.3
A10p26820 Brassica napus HOM05D000040 ORTHO05D001305 3.8e-08 62.8 218 24.8
Os07g0658600 Oryza sativa ssp. japonica HOM05D000040 ORTHO05D002000 3.8e-08 62.8 225 28.0
BolC9t59424H Brassica oleracea HOM05D000040 ORTHO05D001305 6.6e-08 62.0 231 26.0
AUR62043016 Chenopodium quinoa HOM05D000040 ORTHO05D005442 6.6e-08 62.0 208 26.9
PSO339G5798 Papaver somniferum HOM05D000040 ORTHO05D000759 6.6e-08 62.0 223 27.4
C09p66010 Brassica napus HOM05D000040 ORTHO05D001305 8.6e-08 61.6 235 26.4
Sabra01G0020500 Salix brachista HOM05D000040 ORTHO05D002000 8.6e-08 61.6 217 28.6
MBI14_g11786_MAGBIO Magnolia biondii HOM05D000040 ORTHO05D001305 1.5e-07 60.8 199 29.6
Prupe.8G253700 Prunus persica HOM05D000040 ORTHO05D002507 1.5e-07 60.8 211 26.5
Rhsim12G0081000 Rhododendron simsii HOM05D000040 ORTHO05D009156 1.5e-07 60.8 218 30.7
HanXRQChr11g0343951 Helianthus annuus HOM05D000040 ORTHO05D000267 1.9e-07 60.5 210 26.7
Medtr3g046300 Medicago truncatula HOM05D000040 ORTHO05D005142 1.9e-07 60.5 228 25.4
Nn1g09865 Nelumbo nucifera HOM05D000040 ORTHO05D005442 1.9e-07 60.5 229 27.9
Pp3c13_14230 Physcomitrium patens HOM05D000040 ORTHO05D000267 2.5e-07 60.1 226 27.0
Prupe.8G253600 Prunus persica HOM05D000040 ORTHO05D002507 3.3e-07 59.7 211 25.6
RcHm_v2.0_Chr4g0435911 Rosa chinensis HOM05D000040 ORTHO05D009156 3.3e-07 59.7 220 26.4
PGSC0003DMG400018877 Solanum tuberosum HOM05D000040 ORTHO05D000759 4.3e-07 59.3 220 26.8
Actinidia29758 Actinidia chinensis HOM05D000040 ORTHO05D002000 5.6e-07 58.9 231 26.0
Cc11_g10660 Coffea canephora HOM05D000040 ORTHO05D009156 5.6e-07 58.9 226 27.4
COL.COLO4_18986 Corchorus olitorius HOM05D000040 ORTHO05D001305 5.6e-07 58.9 212 25.5
TPR.G10152 Trifolium pratense HOM05D000040 ORTHO05D005142 7.3e-07 58.5 229 26.2
FAN14G5128 Fragaria x ananassa HOM05D000040 ORTHO05D035614 9.5e-07 58.2 233 25.8
PSO384G0565 Papaver somniferum HOM05D000040 ORTHO05D000759 9.5e-07 58.2 223 29.6
RcHm_v2.0_Chr4g0402511 Rosa chinensis HOM05D000040 ORTHO05D001305 9.5e-07 58.2 222 25.2
TAR629G2122 Trochodendron aralioides HOM05D000040 ORTHO05D009156 9.5e-07 58.2 228 29.4
CAN.G271.8 Capsicum annuum HOM05D000040 ORTHO05D000759 1.2e-06 57.8 220 25.0
Lalb_Chr05g0222611 Lupinus albus HOM05D000040 ORTHO05D000759 1.2e-06 57.8 222 24.3
C09p66030 Brassica napus HOM05D000040 ORTHO05D001305 1.6e-06 57.4 220 25.9
CANSAT78G0575 Cannabis sativa HOM05D000416 ORTHO05D000322 1.6e-06 57.4 131 29.0
CDE05G2534 Ceratophyllum demersum HOM05D004216 ORTHO05D004926 1.6e-06 57.4 254 26.4
BcaC03g17285 Brassica carinata HOM05D000040 ORTHO05D009156 2.1e-06 57.0 229 26.2
BolC2t11313H Brassica oleracea HOM05D000040 ORTHO05D009156 2.1e-06 57.0 229 26.2
TWI79G0797 Tripterygium wilfordii HOM05D000040 ORTHO05D009156 2.1e-06 57.0 233 27.9
A10p26840 Brassica napus HOM05D000040 ORTHO05D001305 2.8e-06 56.6 224 25.0
BraA10t44737Z Brassica rapa HOM05D000040 ORTHO05D001305 2.8e-06 56.6 224 25.0
CANSAT78G1770 Cannabis sativa HOM05D000416 ORTHO05D000322 2.8e-06 56.6 131 29.0
Nn3g17707 Nelumbo nucifera HOM05D000040 ORTHO05D009156 2.8e-06 56.6 220 25.9
A05p03480 Brassica napus HOM05D000040 ORTHO05D005142 4.7e-06 55.8 230 25.7
Sopen10g005190 Solanum pennellii HOM05D000040 ORTHO05D000759 4.7e-06 55.8 220 25.5
FAN08G0024 Fragaria x ananassa HOM05D000040 ORTHO05D000267 6.1e-06 55.5 227 24.7
Pp3c3_17600 Physcomitrium patens HOM05D000040 ORTHO05D000267 6.1e-06 55.5 226 26.5
BcaB07g30257 Brassica carinata HOM05D000040 ORTHO05D009156 8.0e-06 55.1 220 25.5
Psat2g017000 Pisum sativum HOM05D000040 ORTHO05D005142 8.0e-06 55.1 229 25.8


User provided reference genes

Program Settings