Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold49G18201 Striga asiatica HOM05D000096 ORTHO05D026191 1.1e-81 306.6 151 100.0
SGA_v2.0_scaffold87G27182 Striga asiatica HOM05D000096 ORTHO05D000045 4.8e-18 95.1 77 68.8
SGA_v2.0_scaffold69G23109 Striga asiatica HOM05D011787 ORTHO05D008317 1.8e-12 76.6 39 89.7
SGA_v2.0_scaffold30G12418 Striga asiatica HOM05D011787 ORTHO05D008317 8.8e-12 74.3 39 89.7
TPR.G40139 Trifolium pratense HOM05D000096 ORTHO05D000045 1.0e-07 60.8 57 47.4
LjContig00094g0010721 Lotus japonicus HOM05D000096 ORTHO05D000045 1.3e-07 60.5 78 37.2
LjContig00096g0004252 Lotus japonicus HOM05D000096 ORTHO05D000045 1.3e-07 60.5 78 37.2
TPR.G34078 Trifolium pratense HOM05D000096 ORTHO05D000045 2.2e-07 59.7 59 47.5
TPR.G27218 Trifolium pratense HOM05D000096 ORTHO05D000045 2.9e-07 59.3 89 36.0
Medtr5g032930 Medicago truncatula HOM05D000096 ORTHO05D000045 5.0e-07 58.5 59 45.8
TPR.G23031 Trifolium pratense HOM05D000096 ORTHO05D000045 5.0e-07 58.5 59 45.8
TPR.G33050 Trifolium pratense HOM05D000096 ORTHO05D000045 8.5e-07 57.8 61 41.0
Medtr6g052720 Medicago truncatula HOM05D000096 ORTHO05D000045 1.1e-06 57.4 59 44.1
Lj3g0024542 Lotus japonicus HOM05D000096 ORTHO05D000045 1.9e-06 56.6 59 40.7
LjContig00095g0016956 Lotus japonicus HOM05D000096 ORTHO05D000045 1.9e-06 56.6 59 40.7
TPR.G15816 Trifolium pratense HOM05D000096 ORTHO05D000045 2.5e-06 56.2 61 41.0
Medtr1800s0010 Medicago truncatula HOM05D000096 ORTHO05D000045 5.5e-06 55.1 89 33.7
Medtr3g434910 Medicago truncatula HOM05D000096 ORTHO05D000045 5.5e-06 55.1 63 42.9
Hund10443 Selenicereus undatus HOM05D000096 ORTHO05D003441 5.5e-06 55.1 56 46.4
Hund14972 Selenicereus undatus HOM05D000096 ORTHO05D003441 9.4e-06 54.3 56 46.4
Hund25793 Selenicereus undatus HOM05D000096 ORTHO05D003441 9.4e-06 54.3 56 44.6
SGA_v2.0_scaffold416G51227 Striga asiatica HOM05D020453 ORTHO05D026191 9.4e-06 54.3 53 47.2


User provided reference genes

Program Settings