Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold49G18176 Striga asiatica HOM05D006956 ORTHO05D008824 2.4e-105 385.6 203 100.0
MSTRG.13068 Avicennia marina HOM05D006956 ORTHO05D008824 5.8e-83 311.2 198 74.7
Migut.H01688 Erythranthe guttata HOM05D006956 ORTHO05D008824 1.9e-81 306.2 197 76.1
MD10G1203100 Malus domestica HOM05D006956 ORTHO05D008824 5.2e-76 288.1 198 70.7
COL.COLO4_07377 Corchorus olitorius HOM05D006956 ORTHO05D008824 2.0e-75 286.2 197 70.6
Rhsim04G0005600 Rhododendron simsii HOM05D006956 ORTHO05D008824 2.6e-75 285.8 199 69.8
SalBow5G4858 Salvia bowleyana HOM05D006956 ORTHO05D008824 3.4e-75 285.4 198 67.7
Cc05_g16140 Coffea canephora HOM05D006956 ORTHO05D008824 1.3e-74 283.5 197 70.6
Solyc09g098220.3 Solanum lycopersicum HOM05D006956 ORTHO05D008824 1.3e-74 283.5 200 69.5
Sopen09g036160 Solanum pennellii HOM05D006956 ORTHO05D008824 1.3e-74 283.5 200 69.5
Hma1.2p1_0334F.1_g128720 Hydrangea macrophylla HOM05D006956 ORTHO05D008824 1.7e-74 283.1 197 70.1
CSS0020916 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 4.9e-74 281.6 196 70.4
Gorai.007G335600 Gossypium raimondii HOM05D006956 ORTHO05D008824 1.1e-73 280.4 197 68.5
Dinv19614 Davidia involucrata HOM05D006956 ORTHO05D008824 1.9e-73 279.6 198 68.7
TAR362G0399 Trochodendron aralioides HOM05D006956 ORTHO05D008824 1.9e-73 279.6 194 69.1
Peaxi162Scf00286g00448 Petunia axillaris HOM05D006956 ORTHO05D008824 2.4e-73 279.3 200 68.0
TWI39G0297 Tripterygium wilfordii HOM05D006956 ORTHO05D008824 3.2e-73 278.9 198 68.2
Thecc.07G151600 Theobroma cacao HOM05D006956 ORTHO05D008824 4.1e-73 278.5 198 68.7
CAN.G710.39 Capsicum annuum HOM05D006956 ORTHO05D008824 5.4e-73 278.1 201 67.7
Nn7g38051 Nelumbo nucifera HOM05D006956 ORTHO05D008824 7.1e-73 277.7 198 68.7
Gohir.A11G291500 Gossypium hirsutum HOM05D006956 ORTHO05D008824 2.1e-72 276.2 192 70.3
Potri.001G439000 Populus trichocarpa HOM05D006956 ORTHO05D008824 2.1e-72 276.2 198 69.2
Eucgr.A00498 Eucalyptus grandis HOM05D006956 ORTHO05D008824 4.6e-72 275.0 199 65.8
Glyma.15G256600 Glycine max HOM05D006956 ORTHO05D008824 4.6e-72 275.0 198 69.2
QL04p076576 Quercus lobata HOM05D006956 ORTHO05D008824 4.6e-72 275.0 198 67.2
vmacro00957 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 4.6e-72 275.0 197 68.0
FvH4_3g15651 Fragaria vesca HOM05D006956 ORTHO05D008824 1.0e-71 273.9 198 67.7
CSS0000379 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 1.3e-71 273.5 198 69.2
Lj3g0018815 Lotus japonicus HOM05D006956 ORTHO05D008824 1.3e-71 273.5 192 68.2
CiPaw.11G066300 Carya illinoinensis HOM05D006956 ORTHO05D008824 3.0e-71 272.3 197 68.5
Phvul.005G057800 Phaseolus vulgaris HOM05D006956 ORTHO05D008824 3.9e-71 271.9 198 67.7
RcHm_v2.0_Chr5g0026331 Rosa chinensis HOM05D006956 ORTHO05D008824 3.9e-71 271.9 198 67.2
TPR.G9744 Trifolium pratense HOM05D006956 ORTHO05D008824 5.1e-71 271.6 198 67.7
Ca_03670_v3 Cicer arietinum L. HOM05D006956 ORTHO05D008824 6.6e-71 271.2 198 67.2
Psat1g012040 Pisum sativum HOM05D006956 ORTHO05D008824 6.6e-71 271.2 199 66.3
MELO3C019670.2 Cucumis melo HOM05D006956 ORTHO05D008824 1.5e-70 270.0 194 69.1
Medtr2g069340 Medicago truncatula HOM05D006956 ORTHO05D008824 1.9e-70 269.6 198 67.2
CANSAT54G1214 Cannabis sativa HOM05D006956 ORTHO05D008824 2.5e-70 269.2 194 68.6
Haze_03154 Corylus avellana HOM05D006956 ORTHO05D008824 2.5e-70 269.2 196 66.8
Lj3g0016125 Lotus japonicus HOM05D006956 ORTHO05D008824 3.3e-70 268.9 200 64.5
Sabra16G0296900 Salix brachista HOM05D006956 ORTHO05D008824 5.6e-70 268.1 205 65.9
CsaV3_6G013760 Cucumis sativus L. HOM05D006956 ORTHO05D008824 1.2e-69 266.9 199 67.8
Prupe.4G139000 Prunus persica HOM05D006956 ORTHO05D008824 1.2e-69 266.9 191 68.1
VMungo1080G0523 Vigna mungo HOM05D006956 ORTHO05D008824 1.2e-69 266.9 198 65.2
Cfa010806 Carpinus fangiana HOM05D006956 ORTHO05D008824 2.1e-69 266.2 191 69.1
FAN21G1707 Fragaria x ananassa HOM05D006956 ORTHO05D008824 4.7e-69 265.0 198 66.2
PGR142G1185 Punica granatum HOM05D006956 ORTHO05D008824 6.2e-69 264.6 192 67.7
HPP92_011671 Vanilla planifolia HOM05D006956 ORTHO05D008824 8.1e-69 264.2 195 63.1
Lalb_Chr20g0108711 Lupinus albus HOM05D006956 ORTHO05D008824 1.1e-68 263.8 198 65.2
Atru.chr9.1519 Acer truncatum HOM05D006956 ORTHO05D008824 5.2e-68 261.5 195 65.1
FAN11G3326 Fragaria x ananassa HOM05D006956 ORTHO05D008824 5.2e-68 261.5 215 61.9
Aqoxy1G01495 Aquilegia oxysepala HOM05D006956 ORTHO05D008824 6.8e-68 261.2 191 67.0
Manes.06G172400 Manihot esculenta HOM05D006956 ORTHO05D008824 8.9e-68 260.8 199 65.8
Zm00001eb198240 Zea mays HOM05D006956 ORTHO05D008824 1.5e-67 260.0 197 62.9
Thhalv10008810m.g Eutrema salsugineum HOM05D006956 ORTHO05D008824 3.4e-67 258.8 191 65.4
arahy.Tifrunner.gnm1.ann1.JC2BA5 Arachis hypogaea HOM05D006956 ORTHO05D008824 1.3e-66 256.9 196 63.8
Ciclev10022296m.g Citrus clementina HOM05D006956 ORTHO05D008824 2.2e-66 256.1 192 67.2
BraA09t41455Z Brassica rapa HOM05D006956 ORTHO05D008824 3.7e-66 255.4 199 62.8
ClCG02G018480 Citrullus lanatus HOM05D006956 ORTHO05D008824 3.7e-66 255.4 217 60.4
Nitab4.5_0001526g0100 Nicotiana tabacum HOM05D006956 ORTHO05D008824 4.9e-66 255.0 217 61.3
C08p44410 Brassica napus HOM05D006956 ORTHO05D008824 1.1e-65 253.8 198 63.1
A09p60820 Brassica napus HOM05D006956 ORTHO05D008824 1.9e-65 253.1 199 62.3
BolC8t51982H Brassica oleracea HOM05D006956 ORTHO05D008824 3.2e-65 252.3 198 63.1
AT1G16590 Arabidopsis thaliana HOM05D006956 ORTHO05D008824 1.6e-64 250.0 192 61.5
THA.LOC104808124 Tarenaya hassleriana HOM05D006956 ORTHO05D008824 6.0e-64 248.1 189 63.5
arahy.Tifrunner.gnm1.ann1.82TPB7 Arachis hypogaea HOM05D006956 ORTHO05D008824 2.3e-63 246.1 227 55.9
AL1G28750 Arabidopsis lyrata HOM05D006956 ORTHO05D008824 6.6e-63 244.6 191 62.8
GSVIVG01020406001 Vitis vinifera HOM05D006956 ORTHO05D008824 6.6e-63 244.6 169 70.4
CARHR017060 Cardamine hirsuta HOM05D006956 ORTHO05D008824 4.3e-62 241.9 196 59.2
Cfa010808 Carpinus fangiana HOM05D006956 ORTHO05D008824 4.0e-60 235.3 174 66.7
AUR62042418 Chenopodium quinoa HOM05D006956 ORTHO05D008824 8.9e-60 234.2 189 59.8
Aa31LG7G1120 Aethionema arabicum HOM05D006956 ORTHO05D008824 9.9e-59 230.7 199 57.8
AUR62026907 Chenopodium quinoa HOM05D006956 ORTHO05D008824 1.3e-58 230.3 191 59.7
CDE05G1956 Ceratophyllum demersum HOM05D003342 ORTHO05D003861 3.8e-58 228.8 194 60.8
PSO223G0077 Papaver somniferum HOM05D006956 ORTHO05D008824 4.9e-58 228.4 199 59.3
PSO210G3417 Papaver somniferum HOM05D006956 ORTHO05D008824 1.4e-57 226.9 191 60.7
PGSC0003DMG400014067 Solanum tuberosum HOM05D006956 ORTHO05D008466 1.9e-57 226.5 164 67.1
Carub.0001s1634 Capsella rubella HOM05D006956 ORTHO05D008824 7.8e-56 221.1 190 57.9
HanXRQChr08g0231891 Helianthus annuus HOM05D006956 ORTHO05D008824 4.3e-54 215.3 199 54.3
Sp1g14740 Schrenkiella parvula HOM05D006956 ORTHO05D008824 1.3e-53 213.8 191 56.5
ECA247G3084 Erigeron canadensis HOM05D006956 ORTHO05D008824 1.4e-52 210.3 191 56.0
Sc08g0007560 Simmondsia chinensis HOM05D006956 ORTHO05D008824 1.4e-52 210.3 157 64.3
MBI18_g45405_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 1.3e-50 203.8 157 63.7
Sed0013658 Sechium edule HOM05D006956 ORTHO05D008824 7.1e-49 198.0 150 66.0
QL04p076191 Quercus lobata HOM05D006956 ORTHO05D008824 3.4e-43 179.1 126 68.3
QL93p0133_0021 Quercus lobata HOM05D006956 ORTHO05D008824 3.4e-43 179.1 126 68.3
Lsat_1_v5_gn_6_63040 Lactuca sativa HOM05D006956 ORTHO05D008824 3.5e-40 169.1 171 53.8
FAN25G3578 Fragaria x ananassa HOM05D006956 ORTHO05D008824 2.3e-39 166.4 143 59.4
Prupe.4G139100 Prunus persica HOM05D006956 ORTHO05D008824 5.1e-39 165.2 163 55.8
Prupe.4G141800 Prunus persica HOM05D006956 ORTHO05D008824 8.7e-39 164.5 126 65.1
Actinidia35432 Actinidia chinensis HOM05D006956 ORTHO05D008824 2.5e-38 162.9 146 57.5
MD17G1180100 Malus domestica HOM05D006956 ORTHO05D008824 3.3e-38 162.5 128 65.6
RcHm_v2.0_Chr5g0026311 Rosa chinensis HOM05D006956 ORTHO05D008824 1.3e-37 160.6 198 46.5
AagrBONN_evm.TU.Sc2ySwM_368.712 Anthoceros agrestis HOM05D006956 ORTHO05D008824 4.5e-35 152.1 188 41.0
SEGI_37897 Sequoiadendron giganteum HOM05D006956 ORTHO05D008824 2.3e-31 139.8 128 50.8
SMO340G0149 Selaginella moellendorffii HOM05D006956 ORTHO05D008824 2.1e-29 133.3 184 36.4
Pp3c4_6830 Physcomitrium patens HOM05D006956 ORTHO05D008824 1.5e-27 127.1 196 36.7
Pp3c4_6840 Physcomitrium patens HOM05D006956 ORTHO05D008824 5.0e-26 122.1 187 34.2
Mapoly0023s0023 Marchantia polymorpha HOM05D006956 ORTHO05D008824 1.2e-24 117.5 129 45.0
vmacro22747 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 7.9e-24 114.8 176 39.2
vmacro09782 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 4.8e-21 105.5 62 75.8
Potri.011G142501 Populus trichocarpa HOM05D006956 ORTHO05D008824 2.6e-19 99.8 90 58.9
MD05G1220700 Malus domestica HOM05D006956 ORTHO05D008824 4.5e-19 99.0 62 72.6
FAN16G1261 Fragaria x ananassa HOM05D006956 ORTHO05D008824 5.9e-19 98.6 111 49.5
Cpa.g.sc67.70 Carica papaya HOM05D006956 ORTHO05D008824 1.9e-17 93.6 64 67.2
Lju41A37T48 Lonicera japonica HOM05D006956 ORTHO05D008824 2.7e-16 89.7 78 55.1
RcHm_v2.0_Chr5g0031421 Rosa chinensis HOM05D006956 ORTHO05D008824 3.0e-15 86.3 108 50.0
Glyma.08G170300 Glycine max HOM05D006956 ORTHO05D008824 3.9e-15 85.9 159 37.7
ATR0753G159 Amborella trichopoda HOM05D006956 ORTHO05D008824 6.7e-15 85.1 78 56.4
MBI18_g44288_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 2.2e-13 80.1 72 52.8
Cre13.g575333 Chlamydomonas reinhardtii HOM05D006956 ORTHO05D008824 4.1e-12 75.9 149 32.2
Lalb_Chr25g0284921 Lupinus albus HOM05D006956 ORTHO05D008824 6.5e-10 68.6 60 61.7
SGA_v2.0_scaffold62G21353 Striga asiatica HOM05D058974 ORTHO05D402092 5.5e-09 65.5 34 91.2
Lju41A37T47 Lonicera japonica HOM05D006956 ORTHO05D008824 7.2e-09 65.1 44 68.2
SHI21449 Sapria himalayana HOM05D000257 ORTHO05D008466 4.7e-08 62.4 39 66.7


User provided reference genes

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