Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 7.8e-52 206.8 103 100.0
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 5.4e-45 184.1 103 88.3
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 9.2e-45 183.3 103 85.4
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 9.2e-45 183.3 103 85.4
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 1.3e-43 179.5 103 83.5
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 3.0e-43 178.3 101 84.2
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 8.6e-43 176.8 103 79.6
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 9.5e-42 173.3 103 80.6
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 3.6e-41 171.4 103 79.6
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 3.6e-41 171.4 103 79.6
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 4.7e-41 171.0 100 83.0
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 1.1e-37 159.8 82 97.6
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 2.4e-37 158.7 97 81.4
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 1.0e-35 153.3 92 79.3
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 8.6e-35 150.2 92 78.3
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 8.6e-35 150.2 92 77.2
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 1.9e-34 149.1 92 77.2
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 2.5e-34 148.7 92 77.2
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 2.5e-34 148.7 88 79.5
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 2.5e-34 148.7 92 77.2
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 2.5e-34 148.7 92 77.2
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 3.3e-34 148.3 92 76.1
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 4.3e-34 147.9 98 73.5
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 4.3e-34 147.9 98 72.4
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 5.6e-34 147.5 92 76.1
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 5.6e-34 147.5 92 76.1
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 5.6e-34 147.5 92 76.1
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 7.3e-34 147.1 91 75.8
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 7.3e-34 147.1 101 71.3
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 9.5e-34 146.7 92 76.1
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 1.2e-33 146.4 91 75.8
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 1.2e-33 146.4 91 75.8
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 1.2e-33 146.4 92 75.0
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 1.2e-33 146.4 92 75.0
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 2.8e-33 145.2 102 70.6
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 2.8e-33 145.2 92 76.1
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 3.6e-33 144.8 92 73.9
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 3.6e-33 144.8 102 66.7
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 4.7e-33 144.4 91 74.7
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 4.7e-33 144.4 103 68.9
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 6.2e-33 144.1 103 66.0
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 8.1e-33 143.7 103 68.0
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 1.1e-32 143.3 103 68.9
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 1.4e-32 142.9 102 68.6
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 1.8e-32 142.5 92 73.9
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 1.8e-32 142.5 84 81.0
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 2.3e-32 142.1 103 68.0
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 3.1e-32 141.7 93 69.9
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 3.1e-32 141.7 101 69.3
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 4.0e-32 141.4 101 69.3
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 4.0e-32 141.4 99 68.7
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 5.2e-32 141.0 101 68.3
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 6.8e-32 140.6 101 68.3
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 8.9e-32 140.2 92 71.7
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 1.2e-31 139.8 88 76.1
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 1.2e-31 139.8 103 67.0
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 1.5e-31 139.4 103 67.0
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 2.0e-31 139.0 92 71.7
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 2.6e-31 138.7 102 68.6
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 2.6e-31 138.7 103 66.0
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 2.6e-31 138.7 103 66.0
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 2.6e-31 138.7 92 71.7
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 3.4e-31 138.3 93 68.8
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 3.4e-31 138.3 103 65.0
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 3.4e-31 138.3 103 65.0
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 3.4e-31 138.3 101 67.3
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 4.4e-31 137.9 88 72.7
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 4.4e-31 137.9 92 71.7
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 4.4e-31 137.9 92 71.7
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 4.4e-31 137.9 92 71.7
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 4.4e-31 137.9 92 70.7
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 5.8e-31 137.5 100 70.0
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 5.8e-31 137.5 91 72.5
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 9.9e-31 136.7 92 69.6
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 2.2e-30 135.6 99 61.6
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 2.9e-30 135.2 96 66.7
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 3.7e-30 134.8 102 66.7
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 1.1e-29 133.3 102 62.7
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 1.1e-29 133.3 102 62.7
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 1.4e-29 132.9 92 67.4
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 1.4e-29 132.9 96 65.6
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 1.9e-29 132.5 102 62.7
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 2.4e-29 132.1 77 80.5
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 2.4e-29 132.1 91 67.0
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 3.2e-29 131.7 92 67.4
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 3.2e-29 131.7 93 67.7
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 9.2e-29 130.2 103 62.1
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 2.7e-28 128.6 92 67.4
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 1.0e-27 126.7 90 66.7
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 2.5e-26 122.1 146 49.3
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 9.5e-26 120.2 81 72.8
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 2.8e-25 118.6 80 70.0
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 2.8e-25 118.6 80 71.2
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 8.1e-25 117.1 79 70.9
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 8.1e-25 117.1 87 64.4
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 3.1e-24 115.2 80 70.0
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 4.0e-24 114.8 124 49.2
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 1.2e-23 113.2 101 60.4
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 2.6e-23 112.1 91 57.1
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 3.4e-23 111.7 80 63.8
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 7.6e-23 110.5 85 67.1
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 3.8e-22 108.2 80 70.0
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 2.7e-20 102.1 92 48.9
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 4.6e-20 101.3 87 56.3
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 7.8e-20 100.5 74 63.5
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 8.7e-19 97.1 77 62.3
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 4.3e-18 94.7 97 48.5
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 1.3e-17 93.2 49 85.7
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 1.4e-16 89.7 86 54.7
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 2.4e-16 89.0 71 62.0
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 1.2e-15 86.7 59 71.2
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 2.2e-14 82.4 57 73.7
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 9.6e-10 67.0 48 68.8
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 2.6e-07 58.9 46 60.9
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 3.4e-07 58.5 45 62.2
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 4.9e-06 54.7 45 57.8


User provided reference genes

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