Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 1.8e-111 406.0 209 100.0
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 6.6e-74 281.2 210 72.9
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 2.9e-69 265.8 209 69.4
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 4.9e-69 265.0 209 67.5
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 7.3e-65 251.1 211 64.5
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 1.6e-64 250.0 209 63.6
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 1.1e-63 247.3 215 62.3
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 1.4e-63 246.9 209 61.7
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 2.3e-63 246.1 213 63.8
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 5.2e-63 245.0 217 61.3
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 6.8e-63 244.6 209 64.1
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 6.8e-63 244.6 209 63.2
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 6.8e-63 244.6 221 61.1
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 6.8e-63 244.6 152 81.6
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 1.5e-62 243.4 214 61.7
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 2.0e-62 243.0 214 61.7
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.6e-62 242.7 215 61.4
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 5.8e-62 241.5 216 62.0
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 7.5e-62 241.1 220 62.3
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 7.5e-62 241.1 219 62.1
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 7.5e-62 241.1 228 59.6
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 9.8e-62 240.7 219 60.7
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 9.8e-62 240.7 214 61.2
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 2.2e-61 239.6 212 62.3
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 8.3e-61 237.7 221 58.8
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.4e-60 236.9 158 74.1
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.4e-60 236.1 189 65.6
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 2.4e-60 236.1 218 60.1
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 4.1e-60 235.3 216 60.2
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 5.4e-60 235.0 209 59.8
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 5.4e-60 235.0 209 59.8
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 5.4e-60 235.0 216 62.0
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 5.4e-60 235.0 194 62.9
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 5.4e-60 235.0 145 79.3
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 9.2e-60 234.2 211 59.7
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 9.2e-60 234.2 193 64.8
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 9.2e-60 234.2 222 59.5
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 1.2e-59 233.8 163 72.4
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 1.2e-59 233.8 146 78.8
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 2.1e-59 233.0 144 78.5
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 2.7e-59 232.6 196 63.3
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 4.6e-59 231.9 182 68.1
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 4.6e-59 231.9 187 65.2
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 7.8e-59 231.1 211 62.1
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 1.3e-58 230.3 209 57.9
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 1.7e-58 229.9 215 57.2
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 2.3e-58 229.6 208 62.0
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 2.3e-58 229.6 146 76.0
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 3.0e-58 229.2 221 59.3
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 6.6e-58 228.0 196 61.2
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 8.6e-58 227.6 222 57.7
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 1.1e-57 227.3 213 56.3
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 1.1e-57 227.3 146 75.3
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 1.1e-57 227.3 191 62.3
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 1.1e-57 227.3 212 57.5
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.5e-57 226.1 134 80.6
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 3.3e-57 225.7 213 55.9
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 5.6e-57 224.9 173 67.6
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 5.6e-57 224.9 211 58.8
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 5.6e-57 224.9 210 58.6
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 5.6e-57 224.9 218 58.3
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 7.3e-57 224.6 183 63.9
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 1.6e-56 223.4 193 63.2
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.1e-56 223.0 219 58.4
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 2.1e-56 223.0 217 55.8
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 2.1e-56 223.0 202 59.9
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 6.2e-56 221.5 142 78.2
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 8.1e-56 221.1 136 77.2
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 8.1e-56 221.1 136 77.9
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 8.1e-56 221.1 224 58.9
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 1.1e-55 220.7 213 59.6
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 2.3e-55 219.5 228 58.8
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 6.8e-55 218.0 145 71.7
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 1.5e-54 216.9 136 76.5
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.6e-54 216.1 143 75.5
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 5.8e-54 214.9 136 76.5
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 5.8e-54 214.9 136 76.5
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 7.5e-54 214.5 153 68.6
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 1.7e-53 213.4 164 65.9
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.4e-52 210.3 216 57.4
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 4.1e-52 208.8 155 68.4
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 4.1e-52 208.8 128 77.3
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 5.4e-52 208.4 146 71.9
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 5.4e-52 208.4 130 76.9
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 1.2e-51 207.2 200 58.5
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 1.6e-51 206.8 202 56.9
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 1.6e-51 206.8 202 56.9
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 6.0e-51 204.9 222 52.7
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 1.0e-50 204.1 136 72.8
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 3.0e-50 202.6 193 54.9
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 1.1e-49 200.7 195 55.4
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 2.5e-49 199.5 189 61.4
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 4.3e-49 198.7 135 67.4
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 4.3e-49 198.7 176 61.9
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 7.3e-49 198.0 189 57.1
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 1.6e-48 196.8 131 67.2
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 1.3e-45 187.2 231 51.9
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 2.2e-45 186.4 218 51.8
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 4.9e-45 185.3 111 80.2
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 1.9e-44 183.3 108 82.4
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 2.4e-44 183.0 137 62.0
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 2.8e-40 169.5 110 76.4
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 2.7e-35 152.9 149 57.7
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 4.5e-30 135.6 72 87.5
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 1.3e-29 134.0 144 52.8
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 6.4e-29 131.7 150 52.0
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 3.3e-25 119.4 138 42.8
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 7.4e-25 118.2 161 47.2
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 7.4e-25 118.2 154 45.5
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 9.6e-25 117.9 87 66.7
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.1e-23 114.4 100 60.0
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 5.3e-23 112.1 68 77.9
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 5.3e-23 112.1 68 77.9
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 3.7e-16 89.4 58 69.0
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 2.1e-11 73.6 52 69.2
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 3.4e-06 56.2 99 37.4


User provided reference genes

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