Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold49G18104 Striga asiatica HOM05D008620 ORTHO05D011304 3.0e-81 305.1 147 100.0
SGA_v2.0_scaffold121G33144 Striga asiatica HOM05D008620 ORTHO05D011304 7.4e-40 167.5 110 79.1
SGA_v2.0_scaffold121G33149 Striga asiatica HOM05D008620 ORTHO05D011304 5.9e-37 157.9 105 78.1
SGA_v2.0_scaffold121G33146 Striga asiatica HOM05D008620 ORTHO05D011304 7.7e-37 157.5 105 78.1
SGA_v2.0_scaffold627G53254 Striga asiatica HOM05D008620 ORTHO05D011304 1.0e-36 157.1 105 77.1
SGA_v2.0_scaffold121G33134 Striga asiatica HOM05D008620 ORTHO05D011304 5.0e-36 154.8 110 76.4
SGA_v2.0_scaffold44G16610 Striga asiatica HOM05D008620 ORTHO05D011304 6.3e-31 137.9 99 70.7
SGA_v2.0_scaffold143G35776 Striga asiatica HOM05D008620 ORTHO05D011304 1.3e-28 130.2 125 58.4
TAR628G0251 Trochodendron aralioides HOM05D008620 ORTHO05D011304 2.9e-20 102.4 86 61.6
SGA_v2.0_scaffold221G42752 Striga asiatica HOM05D008620 ORTHO05D011304 2.1e-18 96.3 144 44.4
MBI18_g21804_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 3.7e-15 85.5 95 52.6
MBI12_g36691_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 8.3e-15 84.3 106 50.0
FAN14G3868 Fragaria x ananassa HOM05D008620 ORTHO05D011304 5.4e-14 81.6 86 48.8
ATR0855G001 Amborella trichopoda HOM05D008620 ORTHO05D011304 1.6e-13 80.1 90 51.1
SGA_v2.0_scaffold21G09498 Striga asiatica HOM05D008620 ORTHO05D011304 3.8e-12 75.5 109 44.0
FAN28G0556 Fragaria x ananassa HOM05D008620 ORTHO05D011304 2.5e-11 72.8 62 59.7
FAN19G0360 Fragaria x ananassa HOM05D008620 ORTHO05D011304 5.6e-11 71.6 62 59.7
Lsat_1_v5_gn_2_129941 Lactuca sativa HOM05D008620 ORTHO05D011304 2.8e-10 69.3 65 53.8
MBI19_g32860_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 8.0e-10 67.8 107 43.0
Nitab4.5_0000287g0120 Nicotiana tabacum HOM05D008620 ORTHO05D011304 1.0e-09 67.4 75 49.3
Os03g0430575 Oryza sativa ssp. japonica HOM05D008620 ORTHO05D011304 5.2e-09 65.1 93 41.9
Os03g0158800 Oryza sativa ssp. japonica HOM05D008620 ORTHO05D011304 1.2e-08 63.9 67 50.7
MBI13_g43923_MAGBIO Magnolia biondii HOM05D031592 ORTHO05D011304 3.4e-08 62.4 81 44.4
Lsat_1_v5_gn_8_115540 Lactuca sativa HOM05D008620 ORTHO05D011304 1.7e-07 60.1 69 50.7
SGA_v2.0_scaffold146G36260 Striga asiatica HOM05D022033 ORTHO05D020747 2.9e-07 59.3 68 50.0


User provided reference genes

Program Settings