Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold496G52465 Striga asiatica HOM05D003669 ORTHO05D005046 5.7e-178 627.5 319 100.0
SGA_v2.0_scaffold16G07737 Striga asiatica HOM05D003669 ORTHO05D005046 4.1e-91 339.0 235 82.1
Migut.L01241 Erythranthe guttata HOM05D003669 ORTHO05D005046 7.9e-79 298.1 236 72.0
Oeu041090.1 Olea europaea HOM05D003669 ORTHO05D005046 7.9e-79 298.1 235 71.5
Nitab4.5_0000720g0060 Nicotiana tabacum HOM05D003669 ORTHO05D005046 1.0e-78 297.7 235 70.6
SalBow2G2159 Salvia bowleyana HOM05D003669 ORTHO05D005046 3.0e-78 296.2 235 70.2
SalBow2G3632 Salvia bowleyana HOM05D003669 ORTHO05D005046 3.0e-78 296.2 235 70.2
Nitab4.5_0000141g0030 Nicotiana tabacum HOM05D003669 ORTHO05D005046 6.7e-78 295.0 235 70.6
Dinv34099 Davidia involucrata HOM05D003669 ORTHO05D005046 1.5e-77 293.9 235 68.5
PGSC0003DMG400026831 Solanum tuberosum HOM05D003669 ORTHO05D005046 9.7e-77 291.2 235 69.4
Nitab4.5_0000391g0150 Nicotiana tabacum HOM05D003669 ORTHO05D005046 1.3e-76 290.8 235 68.5
Sopen01g006940 Solanum pennellii HOM05D003669 ORTHO05D005046 2.2e-76 290.0 235 68.9
Cc11_g12530 Coffea canephora HOM05D003669 ORTHO05D005046 4.8e-76 288.9 235 69.4
Solyc01g010990.2 Solanum lycopersicum HOM05D003669 ORTHO05D005046 6.3e-76 288.5 235 68.5
Hma1.2p1_0354F.1_g133780 Hydrangea macrophylla HOM05D003669 ORTHO05D005046 1.1e-75 287.7 235 68.5
CAN.G314.1 Capsicum annuum HOM05D003669 ORTHO05D005046 1.4e-75 287.3 235 67.7
CSS0031393 Camellia sinensis var. sinensis HOM05D003669 ORTHO05D005046 2.4e-75 286.6 235 67.7
Peaxi162Scf00097g00103 Petunia axillaris HOM05D003669 ORTHO05D005046 2.4e-75 286.6 235 68.9
Peaxi162Scf00222g00021 Petunia axillaris HOM05D003669 ORTHO05D005046 6.9e-75 285.0 235 67.7
MSTRG.7776 Avicennia marina HOM05D003669 ORTHO05D005046 9.1e-75 284.6 235 68.5
Actinidia33230 Actinidia chinensis HOM05D003669 ORTHO05D005046 1.2e-74 284.3 235 68.5
Nitab4.5_0028573g0010 Nicotiana tabacum HOM05D003669 ORTHO05D005046 2.6e-74 283.1 235 67.7
Dinv16692 Davidia involucrata HOM05D003669 ORTHO05D005046 3.4e-74 282.7 240 66.7
CSS0046805 Camellia sinensis var. sinensis HOM05D003669 ORTHO05D005046 1.3e-73 280.8 235 66.8
PGSC0003DMG400028338 Solanum tuberosum HOM05D003669 ORTHO05D005046 1.4e-72 277.3 235 65.5
Sopen05g007700 Solanum pennellii HOM05D003669 ORTHO05D005046 7.2e-72 275.0 235 65.1
CAN.G964.18 Capsicum annuum HOM05D003669 ORTHO05D005046 2.7e-71 273.1 235 63.8
MSTRG.725 Avicennia marina HOM05D003669 ORTHO05D005046 1.4e-70 270.8 235 66.4
Solyc05g012870.1 Solanum lycopersicum HOM05D003669 ORTHO05D005046 1.8e-70 270.4 235 64.3
Aqoxy3G03503 Aquilegia oxysepala HOM05D003669 ORTHO05D005046 1.5e-69 267.3 235 64.7
Rhsim12G0133100 Rhododendron simsii HOM05D003669 ORTHO05D005046 2.6e-69 266.5 234 64.5
Manes.01G032000 Manihot esculenta HOM05D003669 ORTHO05D005046 3.3e-69 266.2 235 63.0
Lj3P1033T30 Lonicera japonica HOM05D003669 ORTHO05D005046 4.4e-69 265.8 229 65.1
CiPaw.06G089100 Carya illinoinensis HOM05D003669 ORTHO05D005046 5.7e-69 265.4 235 63.4
Actinidia31958 Actinidia chinensis HOM05D003669 ORTHO05D005046 7.4e-69 265.0 229 66.4
DCAR_023812 Daucus carota HOM05D003669 ORTHO05D005046 2.8e-68 263.1 235 61.7
PGR102G2611 Punica granatum HOM05D003669 ORTHO05D005046 4.8e-68 262.3 235 62.6
Potri.008G091500 Populus trichocarpa HOM05D003669 ORTHO05D005046 1.1e-67 261.2 235 63.4
Duzib268G1480 Durio zibethinus HOM05D003669 ORTHO05D005046 1.4e-67 260.8 235 62.1
THA.LOC104808637 Tarenaya hassleriana HOM05D003669 ORTHO05D005046 2.4e-67 260.0 235 60.9
Sabra08G0068500 Salix brachista HOM05D003669 ORTHO05D005046 7.0e-67 258.5 235 62.6
COL.COLO4_27966 Corchorus olitorius HOM05D003669 ORTHO05D005046 1.2e-66 257.7 235 60.4
Duzib251G0808 Durio zibethinus HOM05D003669 ORTHO05D005046 1.6e-66 257.3 235 61.3
Duzib248G1252 Durio zibethinus HOM05D003669 ORTHO05D005046 2.0e-66 256.9 235 62.1
Sc11g0002160 Simmondsia chinensis HOM05D003669 ORTHO05D005046 2.6e-66 256.5 235 62.1
Glyma.07G227800 Glycine max HOM05D003669 ORTHO05D005046 3.5e-66 256.1 235 61.7
EL10Ac6g13272 Beta vulgaris HOM05D003669 ORTHO05D005046 4.5e-66 255.8 235 61.3
TAR006G0001 Trochodendron aralioides HOM05D003669 ORTHO05D005046 5.9e-66 255.4 235 62.1
VMungo0251G2119 Vigna mungo HOM05D003669 ORTHO05D005046 5.9e-66 255.4 235 60.4
Lsat_1_v5_gn_8_49161 Lactuca sativa HOM05D003669 ORTHO05D005046 7.7e-66 255.0 235 62.1
TWI31G0268 Tripterygium wilfordii HOM05D003669 ORTHO05D005046 7.7e-66 255.0 235 59.6
QL03p069846 Quercus lobata HOM05D003669 ORTHO05D005046 1.3e-65 254.2 235 60.9
Nn4g23289 Nelumbo nucifera HOM05D003669 ORTHO05D005046 1.7e-65 253.8 235 60.9
THA.LOC104822905 Tarenaya hassleriana HOM05D003669 ORTHO05D005046 1.7e-65 253.8 235 59.6
Thecc.02G339000 Theobroma cacao HOM05D003669 ORTHO05D005046 1.7e-65 253.8 235 60.9
Phvul.002G168800 Phaseolus vulgaris HOM05D003669 ORTHO05D005046 2.9e-65 253.1 235 60.9
Sabra10G0124200 Salix brachista HOM05D003669 ORTHO05D005046 2.9e-65 253.1 235 61.7
Atru.chr11.1711 Acer truncatum HOM05D003669 ORTHO05D005046 3.8e-65 252.7 235 59.6
Lalb_Chr09g0329151 Lupinus albus HOM05D003669 ORTHO05D005046 3.8e-65 252.7 235 61.7
MD13G1068000 Malus domestica HOM05D003669 ORTHO05D005046 6.5e-65 251.9 235 60.0
Nn3g17339 Nelumbo nucifera HOM05D003669 ORTHO05D005046 6.5e-65 251.9 235 59.6
CANSAT64G1602 Cannabis sativa HOM05D003669 ORTHO05D005046 8.5e-65 251.5 235 60.0
Lj4g0023966 Lotus japonicus HOM05D003669 ORTHO05D005046 1.1e-64 251.1 235 60.9
MD16G1066800 Malus domestica HOM05D003669 ORTHO05D005046 1.1e-64 251.1 235 58.3
Carub.0001s2438 Capsella rubella HOM05D003669 ORTHO05D005046 1.5e-64 250.8 235 59.6
Ca_23887_v3 Cicer arietinum L. HOM05D003669 ORTHO05D005046 1.5e-64 250.8 235 58.3
Prupe.1G280100 Prunus persica HOM05D003669 ORTHO05D005046 1.5e-64 250.8 235 58.7
ECA233G0305 Erigeron canadensis HOM05D003669 ORTHO05D005046 1.9e-64 250.4 235 61.3
Thhalv10018794m.g Eutrema salsugineum HOM05D003669 ORTHO05D005046 1.9e-64 250.4 235 60.9
AT1G26650 Arabidopsis thaliana HOM05D003669 ORTHO05D005046 3.2e-64 249.6 235 58.7
AL2G28540 Arabidopsis lyrata HOM05D003669 ORTHO05D005046 4.2e-64 249.2 235 59.6
Cpa.g.sc1.72 Carica papaya HOM05D003669 ORTHO05D005046 4.2e-64 249.2 235 60.4
HanXRQChr08g0211271 Helianthus annuus HOM05D003669 ORTHO05D005046 4.2e-64 249.2 235 62.6
Carub.0002s1603 Capsella rubella HOM05D003669 ORTHO05D005046 5.5e-64 248.8 235 60.0
Medtr4g082350 Medicago truncatula HOM05D003669 ORTHO05D005046 5.5e-64 248.8 235 59.1
AT1G69430 Arabidopsis thaliana HOM05D003669 ORTHO05D005046 7.2e-64 248.4 235 59.6
Potri.010G163400 Populus trichocarpa HOM05D003669 ORTHO05D005046 7.2e-64 248.4 235 60.4
TWI75G1484 Tripterygium wilfordii HOM05D003669 ORTHO05D005046 7.2e-64 248.4 235 57.9
Ah.03g134650 Amaranthus hybridus HOM05D003669 ORTHO05D005046 1.2e-63 247.7 235 59.6
AL1G39080 Arabidopsis lyrata HOM05D003669 ORTHO05D005046 1.2e-63 247.7 235 58.7
BcaB03g14707 Brassica carinata HOM05D003669 ORTHO05D005046 1.2e-63 247.7 235 60.0
RcHm_v2.0_Chr7g0221801 Rosa chinensis HOM05D003669 ORTHO05D005046 1.2e-63 247.7 235 59.6
Aa31LG7G8440 Aethionema arabicum HOM05D003669 ORTHO05D005046 1.6e-63 247.3 235 57.9
TPR.G34083 Trifolium pratense HOM05D003669 ORTHO05D005046 2.1e-63 246.9 235 58.7
Lj6P783T30 Lonicera japonica HOM05D003669 ORTHO05D005046 2.7e-63 246.5 235 60.4
FAN18G1113 Fragaria x ananassa HOM05D003669 ORTHO05D005046 4.7e-63 245.7 235 58.3
CARHR025320 Cardamine hirsuta HOM05D003669 ORTHO05D005046 6.1e-63 245.4 235 57.4
A07p35780 Brassica napus HOM05D003669 ORTHO05D005046 8.0e-63 245.0 235 59.6
C05p24360 Brassica napus HOM05D003669 ORTHO05D005046 8.0e-63 245.0 235 59.1
BraA07t31164Z Brassica rapa HOM05D003669 ORTHO05D005046 8.0e-63 245.0 235 59.6
CARHR062320 Cardamine hirsuta HOM05D003669 ORTHO05D005046 8.0e-63 245.0 235 58.3
SpUn0008_0120 Schrenkiella parvula HOM05D003669 ORTHO05D005046 8.0e-63 245.0 235 57.9
SpUn0019_0020 Schrenkiella parvula HOM05D003669 ORTHO05D005046 8.0e-63 245.0 235 57.9
SpUn0296_0010 Schrenkiella parvula HOM05D003669 ORTHO05D005046 8.0e-63 245.0 235 57.9
BraA09t39502Z Brassica rapa HOM05D003669 ORTHO05D005046 1.0e-62 244.6 235 58.7
Ciclev10033399m.g Citrus clementina HOM05D003669 ORTHO05D005046 1.4e-62 244.2 235 59.1
FAN04G2355 Fragaria x ananassa HOM05D003669 ORTHO05D005046 1.4e-62 244.2 235 58.3
PSO063G3148 Papaver somniferum HOM05D003669 ORTHO05D005046 1.4e-62 244.2 235 59.6
BcaC05g26402 Brassica carinata HOM05D003669 ORTHO05D005046 1.8e-62 243.8 235 58.7
A09p40060 Brassica napus HOM05D003669 ORTHO05D005046 1.8e-62 243.8 235 58.3
Thhalv10008119m.g Eutrema salsugineum HOM05D003669 ORTHO05D005046 2.3e-62 243.4 235 58.3
FvH4_5g29140 Fragaria vesca HOM05D003669 ORTHO05D005046 2.3e-62 243.4 228 58.8
PSO063G6284 Papaver somniferum HOM05D003669 ORTHO05D005046 2.3e-62 243.4 235 59.6
Cfa008924 Carpinus fangiana HOM05D003669 ORTHO05D005046 3.0e-62 243.0 234 59.8
FAN08G0960 Fragaria x ananassa HOM05D003669 ORTHO05D005046 3.0e-62 243.0 235 57.9
C06p40420 Brassica napus HOM05D003669 ORTHO05D005046 4.0e-62 242.7 235 59.1
BolC6t39390H Brassica oleracea HOM05D003669 ORTHO05D005046 4.0e-62 242.7 235 59.1
THA.LOC104822182 Tarenaya hassleriana HOM05D003669 ORTHO05D005046 5.2e-62 242.3 235 57.0
BolC5t31170H Brassica oleracea HOM05D003669 ORTHO05D005046 6.7e-62 241.9 235 58.3
Glyma.20G030800 Glycine max HOM05D003669 ORTHO05D005046 6.7e-62 241.9 235 60.4
Gohir.D13G078300 Gossypium hirsutum HOM05D003669 ORTHO05D005046 6.7e-62 241.9 235 57.9
Haze_11953 Corylus avellana HOM05D003669 ORTHO05D005046 8.8e-62 241.5 234 59.4
Gorai.013G089500 Gossypium raimondii HOM05D003669 ORTHO05D005046 8.8e-62 241.5 235 57.9
Psat7g135560 Pisum sativum HOM05D003669 ORTHO05D005046 2.0e-61 240.4 235 57.4
FAN13G0674 Fragaria x ananassa HOM05D003669 ORTHO05D005046 3.3e-61 239.6 235 57.9
Aa31LG4G11440 Aethionema arabicum HOM05D003669 ORTHO05D005046 2.8e-60 236.5 235 57.4
CsaV3_5G033070 Cucumis sativus L. HOM05D003669 ORTHO05D005046 2.8e-60 236.5 235 57.0
ClCG05G023980 Citrullus lanatus HOM05D003669 ORTHO05D005046 8.2e-60 235.0 235 56.6
MELO3C012128.2 Cucumis melo HOM05D003669 ORTHO05D005046 2.4e-59 233.4 235 56.6
unitig_8.g3190 Utricularia gibba HOM05D003669 ORTHO05D005046 9.1e-59 231.5 235 58.3
MBI19_g28315_MAGBIO Magnolia biondii HOM05D003669 ORTHO05D005046 2.0e-58 230.3 235 54.9
Sed0017288 Sechium edule HOM05D003669 ORTHO05D005046 2.7e-58 229.9 235 54.0
Eucgr.B03191 Eucalyptus grandis HOM05D003669 ORTHO05D005046 1.1e-56 224.6 221 60.2
unitig_22.g6502 Utricularia gibba HOM05D003669 ORTHO05D005046 3.0e-54 216.5 235 56.6
CiPaw.05G129400 Carya illinoinensis HOM05D003669 ORTHO05D005046 5.7e-53 212.2 200 58.0
Gohir.D02G127500 Gossypium hirsutum HOM05D003669 ORTHO05D005046 9.8e-53 211.5 236 50.8
Gohir.A03G102600 Gossypium hirsutum HOM05D003669 ORTHO05D005046 1.3e-52 211.1 236 50.8
Gorai.005G143100 Gossypium raimondii HOM05D003669 ORTHO05D005046 6.3e-52 208.8 236 50.4
PSO478G5197 Papaver somniferum HOM05D003669 ORTHO05D005046 1.4e-51 207.6 235 48.9
TAR629G2685 Trochodendron aralioides HOM05D003669 ORTHO05D005046 1.4e-51 207.6 187 62.0
ATR0730G059 Amborella trichopoda HOM05D003669 ORTHO05D005046 1.1e-48 198.0 236 50.8
CDE04G3171 Ceratophyllum demersum HOM05D003669 ORTHO05D005046 1.2e-45 188.0 235 48.5
SEGI_22214 Sequoiadendron giganteum HOM05D003669 ORTHO05D005046 1.2e-45 188.0 235 48.9
AUR62032846 Chenopodium quinoa HOM05D003669 ORTHO05D005046 2.0e-45 187.2 234 49.6
AUR62005854 Chenopodium quinoa HOM05D003669 ORTHO05D005046 3.7e-44 183.0 234 48.7
HanXRQChr12g0379211 Helianthus annuus HOM05D003669 ORTHO05D005046 3.3e-40 169.9 228 47.4
HPP92_023618 Vanilla planifolia HOM05D003669 ORTHO05D005046 6.1e-39 165.6 229 45.0
unitig_749.g13213 Utricularia gibba HOM05D003669 ORTHO05D005046 9.8e-37 158.3 229 46.7
GSVIVG01012487001 Vitis vinifera HOM05D003669 ORTHO05D005046 2.9e-36 156.8 235 46.8
unitig_26.g10293 Utricularia gibba HOM05D003669 ORTHO05D005046 1.2e-29 134.8 228 42.5
Os07g0595900 Oryza sativa ssp. japonica HOM05D003669 ORTHO05D005046 2.2e-28 130.6 236 38.6
HPP92_023699 Vanilla planifolia HOM05D003669 ORTHO05D005046 6.6e-25 119.0 185 40.0
MD05G1259900 Malus domestica HOM05D003669 ORTHO05D005046 1.3e-20 104.8 149 43.6
TAR381G0119 Trochodendron aralioides HOM05D003669 ORTHO05D005046 9.2e-19 98.6 117 50.4
CDE02G4737 Ceratophyllum demersum HOM05D003669 ORTHO05D005046 1.3e-17 94.7 124 46.8
BcaC08g45890 Brassica carinata HOM05D003669 ORTHO05D005046 2.6e-13 80.5 103 46.6
BolC5t31346H Brassica oleracea HOM05D003669 ORTHO05D005046 7.6e-13 79.0 122 41.8
BolC5t31350H Brassica oleracea HOM05D003669 ORTHO05D005046 7.6e-13 79.0 122 41.8
SMO353G0408 Selaginella moellendorffii HOM05D003669 ORTHO05D005046 9.9e-13 78.6 234 29.5
AagrBONN_evm.TU.Sc2ySwM_362.271 Anthoceros agrestis HOM05D003669 ORTHO05D005046 8.4e-12 75.5 234 30.3
SEGI_21937 Sequoiadendron giganteum HOM05D003669 ORTHO05D005046 2.1e-10 70.9 216 28.2
TAR371G1138 Trochodendron aralioides HOM05D004089 ORTHO05D004687 5.1e-09 66.2 44 63.6
Peaxi162Scf00038g02649 Petunia axillaris HOM05D003669 ORTHO05D005046 1.5e-08 64.7 64 57.8
Mapoly0036s0082 Marchantia polymorpha HOM05D003669 ORTHO05D005046 5.2e-06 56.2 241 28.6


User provided reference genes

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