Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold48G18077 Striga asiatica HOM05D001499 ORTHO05D016851 1.7e-69 265.8 125 100.0
SGA_v2.0_scaffold273G46435 Striga asiatica HOM05D001499 ORTHO05D001560 5.6e-20 101.3 47 97.9
SalBow6G6755 Salvia bowleyana HOM05D001499 ORTHO05D001560 6.8e-18 94.4 59 76.3
Lsat_1_v5_gn_5_161241 Lactuca sativa HOM05D001499 ORTHO05D001560 2.2e-16 89.4 52 78.8
ClCG04G003420 Citrullus lanatus HOM05D001499 ORTHO05D001560 2.9e-16 89.0 50 80.0
CsaV3_4G011840 Cucumis sativus L. HOM05D001499 ORTHO05D001560 3.7e-16 88.6 50 78.0
Ah.04g151570 Amaranthus hybridus HOM05D001499 ORTHO05D001560 4.9e-16 88.2 50 80.0
Migut.J01745 Erythranthe guttata HOM05D001499 ORTHO05D001560 6.4e-16 87.8 50 80.0
MELO3C023105.2 Cucumis melo HOM05D001499 ORTHO05D001560 8.3e-16 87.4 50 76.0
CiPaw.09G039100 Carya illinoinensis HOM05D001499 ORTHO05D001560 1.1e-15 87.0 50 76.0
ECA248G2226 Erigeron canadensis HOM05D001499 ORTHO05D001560 1.1e-15 87.0 52 75.0
Potri.006G049100 Populus trichocarpa HOM05D001499 ORTHO05D001560 1.1e-15 87.0 50 78.0
Sed0024523 Sechium edule HOM05D001499 ORTHO05D001560 1.1e-15 87.0 50 78.0
Cc06_g17670 Coffea canephora HOM05D001499 ORTHO05D001560 1.4e-15 86.7 50 74.0
Eucgr.A02337 Eucalyptus grandis HOM05D001499 ORTHO05D001560 1.4e-15 86.7 50 80.0
Oeu008164.1 Olea europaea HOM05D001499 ORTHO05D001560 1.4e-15 86.7 50 78.0
vmacro07834 Vaccinium macrocarpon HOM05D001499 ORTHO05D001560 1.4e-15 86.7 50 80.0
GSVIVG01033256001 Vitis vinifera HOM05D001499 ORTHO05D001560 1.4e-15 86.7 50 78.0
Actinidia22801 Actinidia chinensis HOM05D001499 ORTHO05D001560 1.9e-15 86.3 50 76.0
CDE09G1433 Ceratophyllum demersum HOM05D001499 ORTHO05D001560 1.9e-15 86.3 50 74.0
Ciclev10004686m.g Citrus clementina HOM05D001499 ORTHO05D001560 1.9e-15 86.3 50 78.0
Lju124C43T7 Lonicera japonica HOM05D001499 ORTHO05D001560 1.9e-15 86.3 50 78.0
Lj5g0024774 Lotus japonicus HOM05D001499 ORTHO05D001560 1.9e-15 86.3 50 80.0
Peaxi162Scf00109g00516 Petunia axillaris HOM05D001499 ORTHO05D001560 1.9e-15 86.3 50 76.0
Hund19144 Selenicereus undatus HOM05D001499 ORTHO05D001560 1.9e-15 86.3 50 80.0
TAR633G1315 Trochodendron aralioides HOM05D001499 ORTHO05D001560 1.9e-15 86.3 50 76.0
unitig_26.g9049 Utricularia gibba HOM05D001499 ORTHO05D001560 1.9e-15 86.3 50 78.0
Actinidia17233 Actinidia chinensis HOM05D000141 ORTHO05D000780 2.4e-15 85.9 50 74.0
CANSAT80G2713 Cannabis sativa HOM05D001499 ORTHO05D001560 2.4e-15 85.9 50 78.0
Cfa016805 Carpinus fangiana HOM05D001499 ORTHO05D001560 2.4e-15 85.9 50 78.0
Haze_19836 Corylus avellana HOM05D001499 ORTHO05D001560 2.4e-15 85.9 50 78.0
DCAR_020497 Daucus carota HOM05D001499 ORTHO05D001560 2.4e-15 85.9 50 76.0
Dinv17969 Davidia involucrata HOM05D001499 ORTHO05D001560 2.4e-15 85.9 50 76.0
Dinv39621 Davidia involucrata HOM05D001499 ORTHO05D001560 2.4e-15 85.9 50 76.0
Hma1.2p1_1280F.1_g272530 Hydrangea macrophylla HOM05D001499 ORTHO05D001560 2.4e-15 85.9 50 76.0
Peaxi162Scf00130g00417 Petunia axillaris HOM05D001499 ORTHO05D001560 2.4e-15 85.9 51 70.6
Sabra06G0034400 Salix brachista HOM05D001499 ORTHO05D001560 2.4e-15 85.9 50 76.0
Sopen04g008040 Solanum pennellii HOM05D001499 ORTHO05D001560 2.4e-15 85.9 50 76.0
PGSC0003DMG402027256 Solanum tuberosum HOM05D001499 ORTHO05D001560 2.4e-15 85.9 50 76.0
CAN.G128.7 Capsicum annuum HOM05D001499 ORTHO05D001560 3.2e-15 85.5 49 77.6
FvH4_6g24270 Fragaria vesca HOM05D001499 ORTHO05D001560 3.2e-15 85.5 50 76.0
FAN02G2115 Fragaria x ananassa HOM05D001499 ORTHO05D001560 3.2e-15 85.5 50 76.0
FAN05G4798 Fragaria x ananassa HOM05D001499 ORTHO05D001560 3.2e-15 85.5 50 76.0
FAN09G3104 Fragaria x ananassa HOM05D001499 ORTHO05D001560 3.2e-15 85.5 50 76.0
FAN14G3970 Fragaria x ananassa HOM05D001499 ORTHO05D001560 3.2e-15 85.5 50 76.0
HanXRQChr13g0396471 Helianthus annuus HOM05D001499 ORTHO05D001560 3.2e-15 85.5 49 77.6
Nitab4.5_0003307g0080 Nicotiana tabacum HOM05D001499 ORTHO05D001560 3.2e-15 85.5 49 77.6
Phvul.007G251800 Phaseolus vulgaris HOM05D001499 ORTHO05D001560 3.2e-15 85.5 50 76.0
Psat6g120840 Pisum sativum HOM05D001499 ORTHO05D001560 3.2e-15 85.5 50 78.0
RcHm_v2.0_Chr3g0482921 Rosa chinensis HOM05D001499 ORTHO05D001560 3.2e-15 85.5 50 76.0
Sed0013588 Sechium edule HOM05D001499 ORTHO05D001560 3.2e-15 85.5 50 74.0
Thecc.05G149400 Theobroma cacao HOM05D001499 ORTHO05D001560 3.2e-15 85.5 50 74.0
VMungo0720G2024 Vigna mungo HOM05D001499 ORTHO05D001560 3.2e-15 85.5 50 74.0
Aa31LG1G23700 Aethionema arabicum HOM05D001499 ORTHO05D001560 4.1e-15 85.1 50 76.0
CSS0008595 Camellia sinensis var. sinensis HOM05D001499 ORTHO05D001560 4.1e-15 85.1 49 77.6
CSS0040554 Camellia sinensis var. sinensis HOM05D001499 ORTHO05D001560 4.1e-15 85.1 49 77.6
Migut.K00092 Erythranthe guttata HOM05D001499 ORTHO05D001560 4.1e-15 85.1 49 77.6
Lalb_Chr20g0110561 Lupinus albus HOM05D001499 ORTHO05D001560 4.1e-15 85.1 50 74.0
Medtr1g053160 Medicago truncatula HOM05D001499 ORTHO05D001560 4.1e-15 85.1 50 78.0
TPR.G29104 Trifolium pratense HOM05D001499 ORTHO05D001560 4.1e-15 85.1 50 78.0
TAR636G3397 Trochodendron aralioides HOM05D001499 ORTHO05D001560 4.1e-15 85.1 50 74.0
Atru.chr1.1126 Acer truncatum HOM05D001499 ORTHO05D001560 5.4e-15 84.7 50 74.0
Ca_10365_v3 Cicer arietinum L. HOM05D001499 ORTHO05D001560 5.4e-15 84.7 50 76.0
COL.COLO4_04401 Corchorus olitorius HOM05D001499 ORTHO05D001560 5.4e-15 84.7 50 74.0
ECA236G5056 Erigeron canadensis HOM05D001499 ORTHO05D001560 5.4e-15 84.7 50 74.0
Glyma.02G185300 Glycine max HOM05D001499 ORTHO05D001560 5.4e-15 84.7 50 74.0
Glyma.10G113100 Glycine max HOM05D001499 ORTHO05D001560 5.4e-15 84.7 50 74.0
PGR004G0169 Punica granatum HOM05D001499 ORTHO05D001560 5.4e-15 84.7 50 78.0
Sc13g0001640 Simmondsia chinensis HOM05D001499 ORTHO05D001560 5.4e-15 84.7 49 75.5
Solyc10g080080.3 Solanum lycopersicum HOM05D001499 ORTHO05D001560 5.4e-15 84.7 49 75.5
Sopen10g030690 Solanum pennellii HOM05D001499 ORTHO05D001560 5.4e-15 84.7 49 75.5
AL4G39980 Arabidopsis lyrata HOM05D001499 ORTHO05D001560 7.0e-15 84.3 49 77.6
Cpa.g.sc967.2 Carica papaya HOM05D001499 ORTHO05D001560 7.0e-15 84.3 50 74.0
DCAR_009067 Daucus carota HOM05D001499 ORTHO05D001560 7.0e-15 84.3 50 76.0
Manes.09G020100 Manihot esculenta HOM05D001499 ORTHO05D001560 7.0e-15 84.3 50 72.0
Rhsim03G0027400 Rhododendron simsii HOM05D001499 ORTHO05D001560 7.0e-15 84.3 50 78.0
AT2G41680 Arabidopsis thaliana HOM05D001499 ORTHO05D001560 9.2e-15 84.0 49 77.6
EL10Ac3g07103 Beta vulgaris HOM05D001499 ORTHO05D001560 9.2e-15 84.0 49 75.5
BcaC01g05324 Brassica carinata HOM05D001499 ORTHO05D001560 9.2e-15 84.0 49 77.6
A03p23360 Brassica napus HOM05D001499 ORTHO05D001560 9.2e-15 84.0 49 77.6
C03p27880 Brassica napus HOM05D001499 ORTHO05D001560 9.2e-15 84.0 49 77.6
BolC3t15159H Brassica oleracea HOM05D001499 ORTHO05D001560 9.2e-15 84.0 49 77.6
BraA03t11553Z Brassica rapa HOM05D001499 ORTHO05D001560 9.2e-15 84.0 49 77.6
Carub.0004s2395 Capsella rubella HOM05D001499 ORTHO05D001560 9.2e-15 84.0 49 77.6
CARHR136760 Cardamine hirsuta HOM05D001499 ORTHO05D001560 9.2e-15 84.0 49 77.6
AUR62026055 Chenopodium quinoa HOM05D001499 ORTHO05D001560 9.2e-15 84.0 49 75.5
Thhalv10016520m.g Eutrema salsugineum HOM05D001499 ORTHO05D001560 9.2e-15 84.0 49 77.6
PSO339G1573 Papaver somniferum HOM05D001499 ORTHO05D001560 9.2e-15 84.0 49 75.5
PSO384G4106 Papaver somniferum HOM05D001499 ORTHO05D001560 9.2e-15 84.0 49 75.5
Zm00001eb329630 Zea mays HOM05D001499 ORTHO05D001560 9.2e-15 84.0 50 72.0
Actinidia39215 Actinidia chinensis HOM05D001499 ORTHO05D001560 1.2e-14 83.6 49 75.5
AUR62024464 Chenopodium quinoa HOM05D001499 ORTHO05D001560 1.2e-14 83.6 49 75.5
Lalb_Chr25g0287171 Lupinus albus HOM05D001499 ORTHO05D001560 1.2e-14 83.6 50 74.0
MD00G1191800 Malus domestica HOM05D001499 ORTHO05D001560 1.2e-14 83.6 50 74.0
Nn7g36317 Nelumbo nucifera HOM05D001499 ORTHO05D001560 1.2e-14 83.6 50 72.0
QL07p001098 Quercus lobata HOM05D000009 ORTHO05D000008 1.2e-14 83.6 47 78.7
PGSC0003DMG400023691 Solanum tuberosum HOM05D001499 ORTHO05D001560 1.2e-14 83.6 49 73.5
ATR0320G039 Amborella trichopoda HOM05D001499 ORTHO05D001560 1.6e-14 83.2 50 70.0
CiPaw.10G034300 Carya illinoinensis HOM05D001499 ORTHO05D001560 1.6e-14 83.2 50 74.0
Gohir.D03G069600 Gossypium hirsutum HOM05D001499 ORTHO05D001560 1.6e-14 83.2 50 74.0
Gorai.003G091100 Gossypium raimondii HOM05D001499 ORTHO05D001560 1.6e-14 83.2 50 74.0
Lsat_1_v5_gn_8_81141 Lactuca sativa HOM05D001499 ORTHO05D001560 1.6e-14 83.2 50 72.0
Manes.08G051700 Manihot esculenta HOM05D001499 ORTHO05D001560 1.6e-14 83.2 50 70.0
Prupe.7G056500 Prunus persica HOM05D001499 ORTHO05D001560 1.6e-14 83.2 50 72.0
AagrBONN_evm.TU.Sc2ySwM_344.1124 Anthoceros agrestis HOM05D001499 ORTHO05D001560 2.1e-14 82.8 49 73.5
arahy.Tifrunner.gnm1.ann1.GI5ZH0 Arachis hypogaea HOM05D001499 ORTHO05D001560 2.1e-14 82.8 50 72.0
arahy.Tifrunner.gnm1.ann1.K81J42 Arachis hypogaea HOM05D001499 ORTHO05D001560 2.1e-14 82.8 50 72.0
BcaC02g12788 Brassica carinata HOM05D001499 ORTHO05D001560 2.1e-14 82.8 49 75.5
A05p02410 Brassica napus HOM05D001499 ORTHO05D001560 2.1e-14 82.8 49 75.5
C04p02860 Brassica napus HOM05D001499 ORTHO05D001560 2.1e-14 82.8 49 75.5
BolC4t21926H Brassica oleracea HOM05D001499 ORTHO05D001560 2.1e-14 82.8 49 75.5
BraA05t19235Z Brassica rapa HOM05D001499 ORTHO05D001560 2.1e-14 82.8 49 75.5
Duzib106G0340 Durio zibethinus HOM05D001499 ORTHO05D001560 2.1e-14 82.8 50 72.0
Gohir.A02G107400 Gossypium hirsutum HOM05D001499 ORTHO05D001560 2.1e-14 82.8 50 72.0
Sp4g23920 Schrenkiella parvula HOM05D001499 ORTHO05D001560 2.1e-14 82.8 49 75.5
Aqoxy2G00225 Aquilegia oxysepala HOM05D001499 ORTHO05D001560 2.7e-14 82.4 50 74.0
THA.LOC104802064 Tarenaya hassleriana HOM05D001499 ORTHO05D001560 2.7e-14 82.4 50 72.0
HPP92_025058 Vanilla planifolia HOM05D001499 ORTHO05D001560 3.5e-14 82.0 49 71.4
Psat5g198000 Pisum sativum HOM05D001499 ORTHO05D016851 6.0e-14 81.3 50 74.0
THA.LOC104824434 Tarenaya hassleriana HOM05D001499 ORTHO05D001560 6.0e-14 81.3 49 73.5
TWI77G0056 Tripterygium wilfordii HOM05D001499 ORTHO05D001560 6.0e-14 81.3 50 72.0
Duzib093G1808 Durio zibethinus HOM05D001499 ORTHO05D001560 7.8e-14 80.9 50 70.0
Mapoly0129s0051 Marchantia polymorpha HOM05D001499 ORTHO05D001560 1.0e-13 80.5 51 68.6
Psat2g159920 Pisum sativum HOM05D001499 ORTHO05D001560 1.7e-13 79.7 50 70.0
Pp3c20_5530 Physcomitrium patens HOM05D001499 ORTHO05D001560 3.0e-13 79.0 49 69.4
Pp3c23_21190 Physcomitrium patens HOM05D001499 ORTHO05D001560 3.9e-13 78.6 49 67.3
CBR_g49843 Chara braunii HOM05D000019 ORTHO05D000002 2.5e-12 75.9 50 66.0
Nitab4.5_0000364g0080 Nicotiana tabacum HOM05D001499 ORTHO05D001560 2.5e-12 75.9 64 59.4
CSS0026952 Camellia sinensis var. sinensis HOM05D001499 ORTHO05D001560 9.5e-12 73.9 40 77.5
CSS0034261 Camellia sinensis var. sinensis HOM05D001499 ORTHO05D001560 9.5e-12 73.9 40 77.5
QL07p001252 Quercus lobata HOM05D001499 ORTHO05D001560 6.2e-11 71.2 38 78.9
CSS0016411 Camellia sinensis var. sinensis HOM05D001499 ORTHO05D016851 1.1e-10 70.5 36 86.1
CSS0041606 Camellia sinensis var. sinensis HOM05D001499 ORTHO05D016851 1.1e-10 70.5 36 86.1
CSS0029731 Camellia sinensis var. sinensis HOM05D001499 ORTHO05D016851 2.3e-10 69.3 36 83.3
CSS0025031 Camellia sinensis var. sinensis HOM05D001499 ORTHO05D016851 5.2e-10 68.2 36 80.6
MD12G1076800 Malus domestica HOM05D001499 ORTHO05D001560 5.2e-10 68.2 36 80.6
SMO365G0084 Selaginella moellendorffii HOM05D001499 ORTHO05D001560 2.6e-09 65.9 36 77.8
Cre01.g054150 Chlamydomonas reinhardtii HOM05D001499 ORTHO05D001560 3.4e-09 65.5 49 59.2
CSS0012974 Camellia sinensis var. sinensis HOM05D001499 ORTHO05D016851 4.4e-09 65.1 36 77.8
CSS0017141 Camellia sinensis var. sinensis HOM05D001499 ORTHO05D016851 4.4e-09 65.1 36 77.8
CSS0010695 Camellia sinensis var. sinensis HOM05D001499 ORTHO05D001560 5.8e-09 64.7 39 71.8
CSS0016166 Camellia sinensis var. sinensis HOM05D001499 ORTHO05D001560 9.9e-09 63.9 39 66.7
CSS0047957 Camellia sinensis var. sinensis HOM05D001499 ORTHO05D016851 9.9e-09 63.9 36 75.0
CSS0004775 Camellia sinensis var. sinensis HOM05D001499 ORTHO05D001560 2.2e-08 62.8 36 77.8
Psat5g197880 Pisum sativum HOM05D001499 ORTHO05D001560 2.2e-08 62.8 35 74.3
SGA_v2.0_scaffold94G28488 Striga asiatica HOM05D001499 ORTHO05D001560 1.9e-07 59.7 34 79.4
COL.COLO4_02242 Corchorus olitorius HOM05D001499 ORTHO05D001560 1.2e-06 57.0 40 65.0
Mapoly0009s0130 Marchantia polymorpha HOM05D001499 ORTHO05D001560 1.6e-06 56.6 43 55.8
PRCOL_00001290 Prasinoderma coloniale HOM05D001499 ORTHO05D001560 1.6e-06 56.6 46 58.7
CDE10G0449 Ceratophyllum demersum HOM05D001499 ORTHO05D001560 2.7e-06 55.8 39 64.1
Solyc03g032000.4 Solanum lycopersicum HOM05D001499 ORTHO05D001560 2.7e-06 55.8 52 51.9
Lsat_1_v5_gn_8_81161 Lactuca sativa HOM05D001499 ORTHO05D001560 3.5e-06 55.5 33 72.7
Sopen03g005850 Solanum pennellii HOM05D001499 ORTHO05D001560 3.5e-06 55.5 52 51.9
PGSC0003DMG400018665 Solanum tuberosum HOM05D001499 ORTHO05D001560 3.5e-06 55.5 52 51.9
THA.LOC104821362 Tarenaya hassleriana HOM05D001499 ORTHO05D001560 3.5e-06 55.5 46 52.2
HPP92_015475 Vanilla planifolia HOM05D001499 ORTHO05D001560 4.6e-06 55.1 39 64.1
Zm00001eb201870 Zea mays HOM05D001499 ORTHO05D001560 4.6e-06 55.1 38 65.8
AagrBONN_evm.TU.Sc2ySwM_117.3542 Anthoceros agrestis HOM05D001499 ORTHO05D001560 6.0e-06 54.7 60 43.3
Lalb_Chr05g0229491 Lupinus albus HOM05D001499 ORTHO05D001560 6.0e-06 54.7 44 52.3
Lalb_Chr09g0324861 Lupinus albus HOM05D001499 ORTHO05D001560 6.0e-06 54.7 39 61.5
Lalb_Chr16g0380211 Lupinus albus HOM05D001499 ORTHO05D001560 6.0e-06 54.7 39 61.5
Nitab4.5_0004448g0020 Nicotiana tabacum HOM05D001499 ORTHO05D001560 6.0e-06 54.7 59 49.2
Pp3c8_10210 Physcomitrium patens HOM05D001499 ORTHO05D001560 6.0e-06 54.7 44 54.5
Pp3c8_10250 Physcomitrium patens HOM05D001499 ORTHO05D001560 6.0e-06 54.7 44 54.5
Atru.chr3.1928 Acer truncatum HOM05D001499 ORTHO05D001560 7.8e-06 54.3 52 48.1
arahy.Tifrunner.gnm1.ann1.3S17EH Arachis hypogaea HOM05D001499 ORTHO05D001560 7.8e-06 54.3 39 61.5
arahy.Tifrunner.gnm1.ann1.PYJ41C Arachis hypogaea HOM05D001499 ORTHO05D001560 7.8e-06 54.3 39 61.5
LjContig00247g0007286 Lotus japonicus HOM05D001499 ORTHO05D001560 7.8e-06 54.3 38 65.8
Nitab4.5_0000304g0020 Nicotiana tabacum HOM05D001499 ORTHO05D001560 7.8e-06 54.3 39 61.5
Phvul.002G119000 Phaseolus vulgaris HOM05D001499 ORTHO05D001560 7.8e-06 54.3 39 61.5
SEGI_04442 Sequoiadendron giganteum HOM05D001499 ORTHO05D001560 7.8e-06 54.3 39 59.0
SEGI_26672 Sequoiadendron giganteum HOM05D001499 ORTHO05D001560 7.8e-06 54.3 39 59.0
SEGI_37441 Sequoiadendron giganteum HOM05D001499 ORTHO05D001560 7.8e-06 54.3 39 59.0
Sc08g0002010 Simmondsia chinensis HOM05D001499 ORTHO05D001560 7.8e-06 54.3 39 61.5
VMungo1215G0295 Vigna mungo HOM05D001499 ORTHO05D001560 7.8e-06 54.3 39 61.5


User provided reference genes

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