Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold48G18075 Striga asiatica HOM05D002134 ORTHO05D008658 0.0e+00 1503.8 846 100.0
Migut.C00708 Erythranthe guttata HOM05D002134 ORTHO05D008658 6.7e-202 708.4 786 59.9
SalBow7G3154 Salvia bowleyana HOM05D002134 ORTHO05D008658 1.2e-174 617.8 820 52.4
Dinv36064 Davidia involucrata HOM05D002134 ORTHO05D008658 3.4e-153 546.6 786 46.8
Nitab4.5_0006995g0020 Nicotiana tabacum HOM05D002134 ORTHO05D008658 6.4e-136 489.2 833 43.3
Nitab4.5_0000523g0050 Nicotiana tabacum HOM05D002134 ORTHO05D008658 3.2e-135 486.9 829 42.6
vmacro04518 Vaccinium macrocarpon HOM05D002134 ORTHO05D008658 2.5e-132 477.2 916 41.0
Cc10_g03060 Coffea canephora HOM05D002134 ORTHO05D008658 1.6e-131 474.6 814 44.5
Actinidia38014 Actinidia chinensis HOM05D002134 ORTHO05D008658 2.4e-130 470.7 874 41.1
CSS0008789 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D008658 6.0e-126 456.1 795 43.0
GSVIVG01009687001 Vitis vinifera HOM05D002134 ORTHO05D008658 3.0e-125 453.8 804 41.7
Peaxi162Scf00925g00033 Petunia axillaris HOM05D002134 ORTHO05D008658 1.3e-123 448.4 794 41.9
QL02p007944 Quercus lobata HOM05D002134 ORTHO05D008658 2.1e-123 447.6 822 41.8
Sopen07g013310 Solanum pennellii HOM05D002134 ORTHO05D008658 1.7e-120 438.0 779 43.4
Solyc07g025380.3 Solanum lycopersicum HOM05D002134 ORTHO05D008658 2.5e-119 434.1 779 43.1
Cfa018138 Carpinus fangiana HOM05D002134 ORTHO05D008658 2.1e-118 431.0 882 39.6
TAR376G0546 Trochodendron aralioides HOM05D002134 ORTHO05D008658 7.9e-118 429.1 838 42.8
ECA247G2410 Erigeron canadensis HOM05D002134 ORTHO05D008658 2.5e-116 424.1 834 41.1
Nn5g29542 Nelumbo nucifera HOM05D002134 ORTHO05D008658 3.3e-116 423.7 819 40.4
DCAR_008767 Daucus carota HOM05D002134 ORTHO05D008658 1.6e-115 421.4 651 45.8
PGSC0003DMG400007581 Solanum tuberosum HOM05D002134 ORTHO05D008658 2.1e-115 421.0 824 41.5
Eucgr.F01907 Eucalyptus grandis HOM05D002134 ORTHO05D008658 6.3e-115 419.5 798 42.0
CiPaw.15G075800 Carya illinoinensis HOM05D002134 ORTHO05D008658 4.1e-114 416.8 649 44.1
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 3.4e-113 413.7 923 39.2
HanXRQChr04g0105601 Helianthus annuus HOM05D002134 ORTHO05D008658 1.1e-111 408.7 874 40.4
Rhsim07G0237200 Rhododendron simsii HOM05D002134 ORTHO05D008658 1.4e-111 408.3 948 36.9
TWI12G0094 Tripterygium wilfordii HOM05D002134 ORTHO05D008658 5.1e-109 399.8 793 41.2
Manes.05G161600 Manihot esculenta HOM05D002134 ORTHO05D008658 8.7e-109 399.1 796 39.3
Atru.chr13.512 Acer truncatum HOM05D002134 ORTHO05D008658 4.3e-108 396.7 806 39.5
Sabra02G0199600 Salix brachista HOM05D002134 ORTHO05D008658 9.7e-108 395.6 794 39.0
CANSAT25G1781 Cannabis sativa HOM05D002134 ORTHO05D008658 1.6e-107 394.8 786 39.1
Atru.chr8.2604 Acer truncatum HOM05D002134 ORTHO05D008658 4.8e-107 393.3 792 39.9
CAN.G52.14 Capsicum annuum HOM05D002134 ORTHO05D008658 1.2e-105 388.7 806 39.7
Duzib116G0898 Durio zibethinus HOM05D002134 ORTHO05D008658 1.6e-102 378.3 800 38.6
Ciclev10000375m.g Citrus clementina HOM05D002134 ORTHO05D008658 1.5e-100 371.7 770 38.2
ClCG05G019130 Citrullus lanatus HOM05D002134 ORTHO05D008658 2.0e-100 371.3 852 38.1
unitig_37.g12967 Utricularia gibba HOM05D002134 ORTHO05D008658 5.7e-100 369.8 765 40.0
Ca_15521_v3 Cicer arietinum L. HOM05D002134 ORTHO05D008658 7.4e-100 369.4 797 38.5
MELO3C003852.2 Cucumis melo HOM05D002134 ORTHO05D008658 3.7e-99 367.1 843 39.0
MD08G1033500 Malus domestica HOM05D002134 ORTHO05D008658 8.2e-99 365.9 835 38.1
Lsat_1_v5_gn_1_17581 Lactuca sativa HOM05D002134 ORTHO05D008658 4.1e-98 363.6 950 35.7
Medtr3g111740 Medicago truncatula HOM05D002134 ORTHO05D008658 5.3e-98 363.2 788 39.3
MBI16_g17456_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 6.9e-98 362.8 762 39.4
Potri.002G262800 Populus trichocarpa HOM05D002134 ORTHO05D008658 1.2e-97 362.1 791 38.8
Lj1g0006718 Lotus japonicus HOM05D002134 ORTHO05D008658 1.3e-96 358.6 768 39.2
Sed0018102 Sechium edule HOM05D002134 ORTHO05D008658 3.8e-96 357.1 814 38.1
Prupe.1G381400 Prunus persica HOM05D002134 ORTHO05D008658 1.1e-95 355.5 721 40.1
Lj4A785T29 Lonicera japonica HOM05D002134 ORTHO05D008658 1.9e-95 354.8 566 45.8
Thecc.08G024500 Theobroma cacao HOM05D002134 ORTHO05D008658 2.5e-95 354.4 768 38.9
PGR031G3893 Punica granatum HOM05D002134 ORTHO05D008658 2.7e-94 350.9 843 37.8
CsaV3_3G045010 Cucumis sativus L. HOM05D002134 ORTHO05D008658 1.0e-93 349.0 843 37.8
MD15G1030200 Malus domestica HOM05D002134 ORTHO05D008658 1.8e-93 348.2 814 39.1
FAN27G2069 Fragaria x ananassa HOM05D002134 ORTHO05D008658 1.1e-92 345.5 811 39.2
TPR.G12392 Trifolium pratense HOM05D002134 ORTHO05D008658 1.5e-92 345.1 816 37.7
Aqoxy6G01051 Aquilegia oxysepala HOM05D002134 ORTHO05D008658 3.1e-90 337.4 806 35.0
Glyma.06G033100 Glycine max HOM05D002134 ORTHO05D008658 4.1e-90 337.0 785 37.6
Gohir.A01G116400 Gossypium hirsutum HOM05D002134 ORTHO05D008658 3.5e-89 334.0 758 38.8
Lalb_Chr23g0266641 Lupinus albus HOM05D002134 ORTHO05D008658 7.7e-89 332.8 762 36.4
arahy.Tifrunner.gnm1.ann1.20CGAG Arachis hypogaea HOM05D002134 ORTHO05D008658 2.9e-88 330.9 801 37.5
Gorai.002G128800 Gossypium raimondii HOM05D002134 ORTHO05D008658 2.9e-88 330.9 759 39.0
Gohir.D01G104800 Gossypium hirsutum HOM05D002134 ORTHO05D008658 4.2e-87 327.0 754 38.6
Duzib093G1270 Durio zibethinus HOM05D002134 ORTHO05D008658 3.6e-86 323.9 601 41.3
FvH4_2g39970 Fragaria vesca HOM05D002134 ORTHO05D008658 3.6e-86 323.9 778 38.3
RcHm_v2.0_Chr6g0300781 Rosa chinensis HOM05D002134 ORTHO05D008658 4.7e-86 323.6 782 38.4
Glyma.04G033100 Glycine max HOM05D002134 ORTHO05D008658 1.5e-84 318.5 801 38.0
THA.LOC104813840 Tarenaya hassleriana HOM05D002134 ORTHO05D008658 1.5e-84 318.5 628 40.6
Phvul.009G057000 Phaseolus vulgaris HOM05D002134 ORTHO05D008658 1.7e-83 315.1 766 36.7
Psat0s2660g0080 Pisum sativum HOM05D002134 ORTHO05D008658 4.2e-79 300.4 794 37.0
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 1.4e-77 295.4 820 36.8
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 6.8e-77 293.1 571 41.9
arahy.Tifrunner.gnm1.ann1.6UHH7V Arachis hypogaea HOM05D002134 ORTHO05D008658 4.4e-76 290.4 836 34.7
PSO675G8956 Papaver somniferum HOM05D002134 ORTHO05D008658 1.7e-75 288.5 860 34.8
PSO541G2605 Papaver somniferum HOM05D002134 ORTHO05D008658 1.1e-74 285.8 881 33.5
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 1.8e-74 285.0 791 36.9
Hund27548 Selenicereus undatus HOM05D002134 ORTHO05D008658 7.0e-74 283.1 569 40.2
Hund27550 Selenicereus undatus HOM05D002134 ORTHO05D008658 7.0e-74 283.1 569 40.2
Sed0020001 Sechium edule HOM05D002134 ORTHO05D008658 5.0e-72 276.9 721 35.5
MBI16_g45959_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 6.5e-72 276.6 732 36.1
ATR0733G232 Amborella trichopoda HOM05D002134 ORTHO05D008658 8.8e-69 266.2 604 39.6
Oeu036193.1 Olea europaea HOM05D002134 ORTHO05D008658 5.7e-68 263.5 405 45.4
Lalb_Chr08g0245851 Lupinus albus HOM05D002134 ORTHO05D008658 5.4e-66 256.9 456 39.9
Hma1.2p1_0203F.1_g086500 Hydrangea macrophylla HOM05D002134 ORTHO05D008658 1.1e-63 249.2 298 53.0
EL10Ac1g01833 Beta vulgaris HOM05D002134 ORTHO05D008658 2.1e-62 245.0 673 34.0
SEGI_00628 Sequoiadendron giganteum HOM05D002134 ORTHO05D008658 4.7e-62 243.8 771 33.1
Thhalv10019843m.g Eutrema salsugineum HOM05D002134 ORTHO05D008658 7.5e-60 236.5 617 38.1
A07p40750 Brassica napus HOM05D002134 ORTHO05D008658 3.5e-57 227.6 633 35.7
Aa31LG4G5340 Aethionema arabicum HOM05D002134 ORTHO05D008658 1.0e-56 226.1 665 33.5
BraA07t31617Z Brassica rapa HOM05D002134 ORTHO05D008658 2.3e-56 224.9 632 34.5
Zm00001eb061990 Zea mays HOM05D002134 ORTHO05D008658 1.1e-55 222.6 610 33.3
CDE02G0502 Ceratophyllum demersum HOM05D002134 ORTHO05D008658 2.3e-53 214.9 772 31.0
BcaC08g46976 Brassica carinata HOM05D002134 ORTHO05D008658 4.0e-53 214.2 623 36.6
Carub.0002s2196 Capsella rubella HOM05D002134 ORTHO05D008658 4.0e-53 214.2 831 31.3
Sp5g30280 Schrenkiella parvula HOM05D002134 ORTHO05D008658 6.8e-53 213.4 632 35.3
BcaC08g46941 Brassica carinata HOM05D000061 ORTHO05D008658 1.3e-51 209.1 638 35.6
AL2G35050 Arabidopsis lyrata HOM05D002134 ORTHO05D008658 1.7e-51 208.8 828 31.5
C06p49130 Brassica napus HOM05D002134 ORTHO05D008658 3.7e-51 207.6 645 35.8
BolC6t39947H Brassica oleracea HOM05D002134 ORTHO05D008658 3.7e-51 207.6 645 35.8
AT1G75150 Arabidopsis thaliana HOM05D002134 ORTHO05D008658 1.1e-50 206.1 821 33.1
Sc02g0006290 Simmondsia chinensis HOM05D002134 ORTHO05D008658 1.3e-48 199.1 522 33.9
Ah.11g043170 Amaranthus hybridus HOM05D002134 ORTHO05D008658 2.3e-45 188.3 685 32.7
CARHR068480 Cardamine hirsuta HOM05D002134 ORTHO05D008658 1.2e-44 186.0 819 31.5
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 1.9e-42 178.7 464 33.4
Cpa.g.sc64.74 Carica papaya HOM05D002134 ORTHO05D008658 2.4e-42 178.3 531 33.3
HPP92_018472 Vanilla planifolia HOM05D002134 ORTHO05D008658 1.3e-35 156.0 535 31.8
AUR62035457 Chenopodium quinoa HOM05D002134 ORTHO05D008658 2.4e-34 151.8 635 28.0
AUR62034948 Chenopodium quinoa HOM05D002134 ORTHO05D008658 1.2e-33 149.4 757 26.6
SHI17315 Sapria himalayana HOM05D002134 ORTHO05D008658 3.6e-30 137.9 621 27.5
Cpa.g.sc64.73 Carica papaya HOM05D002134 ORTHO05D008658 7.6e-28 130.2 189 47.1
Actinidia29830 Actinidia chinensis HOM05D002134 ORTHO05D008658 3.1e-21 108.2 147 49.7
HPP92_018471 Vanilla planifolia HOM05D002134 ORTHO05D008658 4.9e-19 100.9 143 52.4
Pp3c7_550 Physcomitrium patens HOM05D002134 ORTHO05D008658 6.0e-17 94.0 755 25.2
Pp3c7_551 Physcomitrium patens HOM05D002134 ORTHO05D008658 6.0e-17 94.0 755 25.2
Mapoly0032s0034 Marchantia polymorpha HOM05D002134 ORTHO05D008658 1.6e-14 85.9 653 26.2
SMO144G0024 Selaginella moellendorffii HOM05D002134 ORTHO05D008658 1.4e-13 82.8 644 26.7
DCAR_011210 Daucus carota HOM05D001893 ORTHO05D008658 5.8e-12 77.4 205 35.6
Peaxi162Scf00162g00213 Petunia axillaris HOM05D000561 ORTHO05D000514 7.1e-10 70.5 153 35.3


User provided reference genes

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