Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold48G18023 Striga asiatica HOM05D008174 ORTHO05D010206 9.4e-95 350.1 170 100.0
Migut.C00177 Erythranthe guttata HOM05D008174 ORTHO05D010206 8.3e-35 151.0 175 49.7
Migut.J01515 Erythranthe guttata HOM05D008174 ORTHO05D010206 1.2e-28 130.6 174 42.0
Nitab4.5_0002222g0010 Nicotiana tabacum HOM05D008174 ORTHO05D010206 3.8e-27 125.6 160 45.0
SGA_v2.0_scaffold66G22408 Striga asiatica HOM05D008174 ORTHO05D010206 5.4e-26 121.7 174 39.7
Solyc05g050640.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.6e-25 120.2 168 40.5
Sopen05g028850 Solanum pennellii HOM05D008174 ORTHO05D010206 2.1e-25 119.8 168 41.1
Peaxi162Scf00424g00033 Petunia axillaris HOM05D008174 ORTHO05D010206 6.0e-25 118.2 168 39.3
PGSC0003DMG400007047 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.0e-24 117.5 168 41.1
Dinv44264 Davidia involucrata HOM05D008174 ORTHO05D010206 1.3e-24 117.1 167 38.3
Nitab4.5_0000647g0270 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.7e-24 116.7 161 40.4
PGSC0003DMG400007040 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.3e-24 116.3 167 39.5
Nitab4.5_0000777g0110 Nicotiana tabacum HOM05D008174 ORTHO05D010206 3.9e-24 115.5 168 40.5
CAN.G112.8 Capsicum annuum HOM05D008174 ORTHO05D010206 8.6e-24 114.4 168 39.3
PGSC0003DMG400021782 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.1e-23 114.0 166 41.6
Nitab4.5_0004165g0040 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.5e-23 113.6 161 39.8
Solyc06g051770.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 4.3e-23 112.1 168 38.7
PGSC0003DMG400038058 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.3e-23 112.1 166 40.4
CAN.G998.16 Capsicum annuum HOM05D008174 ORTHO05D010206 7.3e-23 111.3 167 38.3
SalBow6G6908 Salvia bowleyana HOM05D008174 ORTHO05D010206 2.1e-22 109.8 131 44.3
CAN.G1363.12 Capsicum annuum HOM05D008174 ORTHO05D010206 2.8e-22 109.4 160 37.5
Sopen10g018310 Solanum pennellii HOM05D008174 ORTHO05D010206 3.6e-22 109.0 168 39.3
Solyc10g047720.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 4.7e-22 108.6 168 39.3
Solyc05g051080.3 Solanum lycopersicum HOM05D008174 ORTHO05D010206 6.2e-22 108.2 169 39.1
Sopen06g017730 Solanum pennellii HOM05D000014 ORTHO05D010206 6.2e-22 108.2 165 38.2
PGSC0003DMG400041985 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.4e-21 107.1 162 36.4
Solyc05g051120.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.8e-21 106.7 168 38.7
CAN.G1086.6 Capsicum annuum HOM05D008174 ORTHO05D010206 2.4e-21 106.3 162 39.5
PGSC0003DMG400039877 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.4e-21 106.3 168 36.9
Sopen05g028810 Solanum pennellii HOM05D008174 ORTHO05D010206 3.1e-21 105.9 168 36.9
Actinidia06986 Actinidia chinensis HOM05D000001 ORTHO05D000003 2.0e-20 103.2 162 37.7
CAN.G305.63 Capsicum annuum HOM05D008174 ORTHO05D010206 3.4e-20 102.4 162 42.0
Dinv15598 Davidia involucrata HOM05D008174 ORTHO05D010206 5.8e-20 101.7 162 33.3
Hma1.2p1_0013F.1_g008300 Hydrangea macrophylla HOM05D008174 ORTHO05D010206 8.4e-19 97.8 169 36.7
PGSC0003DMG400043955 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.4e-18 97.1 148 38.5
PGSC0003DMG400044185 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.2e-17 94.0 162 35.8
Manes.11G074200 Manihot esculenta HOM05D008174 ORTHO05D010206 1.0e-16 90.9 159 34.0
PGSC0003DMG400047299 Solanum tuberosum HOM05D008174 ORTHO05D010206 5.1e-16 88.6 137 36.5
PGSC0003DMG400007005 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.1e-15 87.4 131 38.9
Peaxi162Scf00424g00035 Petunia axillaris HOM05D008174 ORTHO05D010206 1.5e-15 87.0 139 35.3
Sopen05g028860 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-15 86.7 160 32.5
Dinv39722 Davidia involucrata HOM05D008174 ORTHO05D010206 2.1e-14 83.2 152 34.2
Solyc05g051160.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 3.6e-14 82.4 114 39.5
Solyc05g051090.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 8.1e-14 81.3 122 41.0
PGSC0003DMG400038972 Solanum tuberosum HOM05D018142 ORTHO05D010206 1.4e-13 80.5 131 35.1
PGSC0003DMG400007003 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.9e-13 78.2 108 38.9
PGSC0003DMG400043206 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.9e-13 78.2 112 39.3
Solyc05g050660.1 Solanum lycopersicum HOM05D018142 ORTHO05D010206 9.0e-13 77.8 158 31.0
Sopen05g029070 Solanum pennellii HOM05D018142 ORTHO05D010206 1.5e-12 77.0 158 31.0
PGSC0003DMG400034441 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.5e-12 77.0 109 42.2
PGSC0003DMG400045106 Solanum tuberosum HOM05D018142 ORTHO05D010206 3.4e-12 75.9 130 30.8
Ciclev10026971m.g Citrus clementina HOM05D008174 ORTHO05D010206 6.4e-11 71.6 134 34.3
Sc06g0009580 Simmondsia chinensis HOM05D002024 ORTHO05D007288 1.4e-10 70.5 151 31.8
PGSC0003DMG400042098 Solanum tuberosum HOM05D018142 ORTHO05D010206 7.1e-10 68.2 118 33.9
PGSC0003DMG400041587 Solanum tuberosum HOM05D018142 ORTHO05D010206 2.1e-09 66.6 118 33.1
PGSC0003DMG400039569 Solanum tuberosum HOM05D008174 ORTHO05D010206 7.9e-09 64.7 109 33.9
Sopen05g029530 Solanum pennellii HOM05D008174 ORTHO05D010206 8.7e-08 61.2 111 34.2
Nitab4.5_0002222g0090 Nicotiana tabacum HOM05D008174 ORTHO05D010206 2.5e-07 59.7 94 35.1
Solyc08g028980.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.5e-07 59.7 116 32.8
Peaxi162Scf00164g00103 Petunia axillaris HOM05D008174 ORTHO05D010206 9.6e-07 57.8 67 38.8
CAN.G945.6 Capsicum annuum HOM05D008174 ORTHO05D010206 1.6e-06 57.0 115 27.8
Sopen08g009710 Solanum pennellii HOM05D000004 ORTHO05D000034 2.1e-06 56.6 116 30.2
FAN06G2767 Fragaria x ananassa HOM05D008174 ORTHO05D010206 6.2e-06 55.1 99 32.3


User provided reference genes

Program Settings