Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold48G18018 Striga asiatica HOM05D007703 ORTHO05D009731 2.6e-52 208.4 101 100.0
MSTRG.24946 Avicennia marina HOM05D007703 ORTHO05D009731 2.0e-23 112.5 101 60.4
SalBow7G3803 Salvia bowleyana HOM05D007703 ORTHO05D009731 6.9e-21 104.0 101 58.4
CiPaw.05G232600 Carya illinoinensis HOM05D007703 ORTHO05D009731 1.7e-19 99.4 101 54.5
CANSAT25G3270 Cannabis sativa HOM05D007703 ORTHO05D009731 2.9e-19 98.6 101 54.5
QL12p035855 Quercus lobata HOM05D007703 ORTHO05D009731 3.8e-19 98.2 99 55.6
Nitab4.5_0002566g0010 Nicotiana tabacum HOM05D007703 ORTHO05D009731 3.2e-18 95.1 91 53.8
Nitab4.5_0000425g0040 Nicotiana tabacum HOM05D007703 ORTHO05D009731 5.5e-18 94.4 94 53.2
Prupe.1G511400 Prunus persica HOM05D007703 ORTHO05D009731 1.6e-17 92.8 103 54.4
PGR042G2694 Punica granatum HOM05D007703 ORTHO05D009731 1.6e-17 92.8 77 61.0
Gohir.D06G040000 Gossypium hirsutum HOM05D007703 ORTHO05D009731 2.1e-17 92.4 97 54.6
Gorai.010G044500 Gossypium raimondii HOM05D007703 ORTHO05D009731 2.1e-17 92.4 97 54.6
Atru.chr13.1271 Acer truncatum HOM05D007703 ORTHO05D009731 2.7e-17 92.0 91 54.9
Cc10_g05880 Coffea canephora HOM05D007703 ORTHO05D009731 2.7e-17 92.0 101 52.5
Manes.02G156200 Manihot esculenta HOM05D007703 ORTHO05D009731 2.7e-17 92.0 91 56.0
RcHm_v2.0_Chr7g0240051 Rosa chinensis HOM05D007703 ORTHO05D009731 3.6e-17 91.7 91 57.1
FvH4_5g38090 Fragaria vesca HOM05D007703 ORTHO05D009731 4.7e-17 91.3 101 52.5
Potri.005G167200 Populus trichocarpa HOM05D007703 ORTHO05D009731 4.7e-17 91.3 77 61.0
Thecc.08G112500 Theobroma cacao HOM05D007703 ORTHO05D009731 4.7e-17 91.3 91 56.0
Duzib116G0261 Durio zibethinus HOM05D007703 ORTHO05D009731 7.9e-17 90.5 101 52.5
Gohir.A06G038300 Gossypium hirsutum HOM05D007703 ORTHO05D009731 7.9e-17 90.5 101 51.5
Sopen12g029570 Solanum pennellii HOM05D007703 ORTHO05D009731 1.0e-16 90.1 91 51.6
TPR.G1060 Trifolium pratense HOM05D007703 ORTHO05D009731 1.4e-16 89.7 101 49.5
FAN13G1213 Fragaria x ananassa HOM05D007703 ORTHO05D009731 2.3e-16 89.0 101 51.5
Solyc12g056910.2 Solanum lycopersicum HOM05D007703 ORTHO05D009731 2.3e-16 89.0 91 51.6
GSVIVG01008983001 Vitis vinifera HOM05D007703 ORTHO05D009731 3.0e-16 88.6 91 51.6
COL.COLO4_16476 Corchorus olitorius HOM05D007703 ORTHO05D009731 3.9e-16 88.2 101 48.5
Eucgr.F00482 Eucalyptus grandis HOM05D007703 ORTHO05D009731 3.9e-16 88.2 75 60.0
FAN04G3187 Fragaria x ananassa HOM05D007703 ORTHO05D009731 3.9e-16 88.2 101 51.5
PGSC0003DMG400008548 Solanum tuberosum HOM05D007703 ORTHO05D009731 3.9e-16 88.2 101 48.5
Sed0012287 Sechium edule HOM05D007703 ORTHO05D009731 5.1e-16 87.8 94 51.1
TAR628G1160 Trochodendron aralioides HOM05D007703 ORTHO05D009731 5.1e-16 87.8 101 50.5
CDE10G0679 Ceratophyllum demersum HOM05D007703 ORTHO05D009731 8.8e-16 87.0 97 51.5
Cpa.g.sc66.97 Carica papaya HOM05D007703 ORTHO05D009731 1.1e-15 86.7 77 58.4
Phvul.008G170600 Phaseolus vulgaris HOM05D007703 ORTHO05D009731 1.1e-15 86.7 91 52.7
arahy.Tifrunner.gnm1.ann1.0YA8SQ Arachis hypogaea HOM05D007703 ORTHO05D009731 1.5e-15 86.3 77 57.1
Sabra05G0127000 Salix brachista HOM05D007703 ORTHO05D009731 1.5e-15 86.3 98 50.0
arahy.Tifrunner.gnm1.ann1.DJB4SG Arachis hypogaea HOM05D007703 ORTHO05D009731 2.0e-15 85.9 101 48.5
Psat0s3920g0040 Pisum sativum HOM05D007703 ORTHO05D009731 2.0e-15 85.9 101 48.5
Aqoxy6G00561 Aquilegia oxysepala HOM05D007703 ORTHO05D009731 2.6e-15 85.5 72 59.7
Ca_05260_v3 Cicer arietinum L. HOM05D007703 ORTHO05D009731 2.6e-15 85.5 98 49.0
Glyma.14G169200 Glycine max HOM05D007703 ORTHO05D009731 4.4e-15 84.7 101 49.5
Os03g0385301 Oryza sativa ssp. japonica HOM05D007703 ORTHO05D009731 5.7e-15 84.3 93 48.4
Sed0022194 Sechium edule HOM05D007703 ORTHO05D009731 5.7e-15 84.3 101 49.5
TWI56G0976 Tripterygium wilfordii HOM05D007703 ORTHO05D009731 5.7e-15 84.3 101 48.5
Glyma.13G087000 Glycine max HOM05D007703 ORTHO05D009731 7.4e-15 84.0 91 50.5
HanXRQChr05g0144121 Helianthus annuus HOM05D007703 ORTHO05D009731 1.3e-14 83.2 73 57.5
vmacro21226 Vaccinium macrocarpon HOM05D007703 ORTHO05D009731 1.3e-14 83.2 99 51.5
Ciclev10003047m.g Citrus clementina HOM05D007703 ORTHO05D009731 1.7e-14 82.8 74 56.8
Aa31LG7G6100 Aethionema arabicum HOM05D007703 ORTHO05D009731 2.2e-14 82.4 74 58.1
CsaV3_5G023730 Cucumis sativus L. HOM05D007703 ORTHO05D009731 2.8e-14 82.0 101 48.5
Peaxi162Scf00160g01521 Petunia axillaris HOM05D007703 ORTHO05D009731 3.7e-14 81.6 91 50.5
MELO3C022803.2 Cucumis melo HOM05D007703 ORTHO05D009731 6.3e-14 80.9 78 53.8
Hma1.2p1_0120F.1_g057000 Hydrangea macrophylla HOM05D007703 ORTHO05D009731 6.3e-14 80.9 71 56.3
AUR62022343 Chenopodium quinoa HOM05D007703 ORTHO05D009731 8.2e-14 80.5 84 50.0
AUR62034365 Chenopodium quinoa HOM05D007703 ORTHO05D009731 8.2e-14 80.5 92 50.0
Nn1g05271 Nelumbo nucifera HOM05D007703 ORTHO05D009731 8.2e-14 80.5 92 50.0
Hund26653 Selenicereus undatus HOM05D007703 ORTHO05D009731 8.2e-14 80.5 101 48.5
Sc20g0003040 Simmondsia chinensis HOM05D007703 ORTHO05D009731 8.2e-14 80.5 91 48.4
Haze_00567 Corylus avellana HOM05D007703 ORTHO05D009731 1.1e-13 80.1 126 41.3
ECA232G3100 Erigeron canadensis HOM05D007703 ORTHO05D009731 1.1e-13 80.1 72 56.9
Zm00001eb018670 Zea mays HOM05D007703 ORTHO05D009731 1.4e-13 79.7 101 47.5
ClCG03G008950 Citrullus lanatus HOM05D007703 ORTHO05D009731 3.1e-13 78.6 106 43.4
Lj1g0023708 Lotus japonicus HOM05D007703 ORTHO05D009731 3.1e-13 78.6 101 47.5
Medtr5g061840 Medicago truncatula HOM05D007703 ORTHO05D009731 4.1e-13 78.2 99 47.5
Sp1g19640 Schrenkiella parvula HOM05D007703 ORTHO05D009731 4.1e-13 78.2 101 46.5
Thhalv10009245m.g Eutrema salsugineum HOM05D007703 ORTHO05D009731 5.3e-13 77.8 101 44.6
CARHR022490 Cardamine hirsuta HOM05D007703 ORTHO05D009731 7.0e-13 77.4 78 52.6
Lsat_1_v5_gn_9_44720 Lactuca sativa HOM05D007703 ORTHO05D009731 7.0e-13 77.4 97 44.3
HPP92_019111 Vanilla planifolia HOM05D007703 ORTHO05D009731 9.1e-13 77.0 97 46.4
AT1G22140 Arabidopsis thaliana HOM05D007703 ORTHO05D009731 1.2e-12 76.6 79 51.9
Lalb_Chr04g0253231 Lupinus albus HOM05D007703 ORTHO05D009731 1.6e-12 76.3 101 46.5
Carub.0001s2169 Capsella rubella HOM05D007703 ORTHO05D009731 2.6e-12 75.5 79 51.9
AL1G35580 Arabidopsis lyrata HOM05D007703 ORTHO05D009731 4.5e-12 74.7 79 50.6
BcaB07g32233 Brassica carinata HOM05D007703 ORTHO05D009731 4.5e-12 74.7 88 46.6
PSO133G0107 Papaver somniferum HOM05D007703 ORTHO05D009731 7.7e-12 73.9 101 43.6
BcaC05g26138 Brassica carinata HOM05D007703 ORTHO05D009731 2.9e-11 72.0 98 42.9
C05p21240 Brassica napus HOM05D007703 ORTHO05D009731 2.9e-11 72.0 98 42.9
BolC5t30820H Brassica oleracea HOM05D007703 ORTHO05D009731 2.9e-11 72.0 98 42.9
BraA09t39737Z Brassica rapa HOM05D007703 ORTHO05D009731 3.8e-11 71.6 88 44.3
A09p42620 Brassica napus HOM05D007703 ORTHO05D009731 5.0e-11 71.2 88 44.3
CDE10G0176 Ceratophyllum demersum HOM05D007703 ORTHO05D009731 8.5e-11 70.5 40 82.5
CSS0046153 Camellia sinensis var. sinensis HOM05D007703 ORTHO05D009731 1.1e-10 70.1 43 74.4
CAN.G144.17 Capsicum annuum HOM05D007703 ORTHO05D009731 1.1e-10 70.1 43 76.7
Pp3c13_8980 Physcomitrium patens HOM05D007703 ORTHO05D009731 1.5e-10 69.7 82 46.3
SEGI_17524 Sequoiadendron giganteum HOM05D007703 ORTHO05D009731 1.9e-10 69.3 100 45.0
Mapoly0023s0123 Marchantia polymorpha HOM05D007703 ORTHO05D009731 3.2e-10 68.6 71 47.9
RcHm_v2.0_Chr2g0097791 Rosa chinensis HOM05D007703 ORTHO05D009731 5.5e-10 67.8 68 51.5
Ah.05g168540 Amaranthus hybridus HOM05D007703 ORTHO05D009731 2.7e-09 65.5 44 68.2
EL10Ac1g01693 Beta vulgaris HOM05D007703 ORTHO05D009731 1.0e-08 63.5 65 47.7
ATR0564G384 Amborella trichopoda HOM05D007703 ORTHO05D009731 1.4e-08 63.2 74 45.9
MBI02_g20368_MAGBIO Magnolia biondii HOM05D007703 ORTHO05D009731 2.2e-06 55.8 39 64.1
Migut.C00182 Erythranthe guttata HOM05D007703 ORTHO05D009731 4.8e-06 54.7 77 44.2


User provided reference genes

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