Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold48G17978 Striga asiatica HOM05D006114 ORTHO05D007609 5.9e-88 327.4 155 100.0
SalBow7G1400 Salvia bowleyana HOM05D006114 ORTHO05D007609 5.6e-70 267.7 153 80.4
MSTRG.1356 Avicennia marina HOM05D006114 ORTHO05D007609 3.7e-66 255.0 155 74.8
Migut.C01010 Erythranthe guttata HOM05D006114 ORTHO05D007609 1.1e-62 243.4 158 75.3
unitig_749.g13920 Utricularia gibba HOM05D006114 ORTHO05D007609 2.5e-62 242.3 155 71.6
Oeu032982.1 Olea europaea HOM05D006114 ORTHO05D007609 2.1e-61 239.2 155 69.0
MSTRG.22368 Avicennia marina HOM05D006114 ORTHO05D007609 2.2e-58 229.2 153 69.9
Solyc04g071130.1 Solanum lycopersicum HOM05D006114 ORTHO05D007609 7.1e-57 224.2 155 67.1
Sopen04g027070 Solanum pennellii HOM05D006114 ORTHO05D007609 7.1e-57 224.2 155 67.1
CANSAT25G1256 Cannabis sativa HOM05D006114 ORTHO05D007609 1.2e-56 223.4 153 68.6
MD05G1021300 Malus domestica HOM05D006114 ORTHO05D007609 2.7e-56 222.2 155 66.5
Peaxi162Scf00263g01414 Petunia axillaris HOM05D006114 ORTHO05D007609 2.7e-56 222.2 152 69.1
PGSC0003DMG400000797 Solanum tuberosum HOM05D006114 ORTHO05D007609 4.6e-56 221.5 155 66.5
Nitab4.5_0006608g0010 Nicotiana tabacum HOM05D006114 ORTHO05D007609 6.0e-56 221.1 155 66.5
CAN.G175.3 Capsicum annuum HOM05D006114 ORTHO05D007609 7.8e-56 220.7 155 67.1
Haze_17740 Corylus avellana HOM05D006114 ORTHO05D007609 7.8e-56 220.7 157 66.9
CSS0028797 Camellia sinensis var. sinensis HOM05D006114 ORTHO05D007609 1.3e-55 219.9 156 64.7
FvH4_2g14200 Fragaria vesca HOM05D006114 ORTHO05D007609 1.7e-55 219.5 155 65.2
FAN15G0766 Fragaria x ananassa HOM05D006114 ORTHO05D007609 1.7e-55 219.5 155 65.2
Prupe.8G025000 Prunus persica HOM05D006114 ORTHO05D007609 2.3e-55 219.2 153 65.4
Cfa018335 Carpinus fangiana HOM05D006114 ORTHO05D007609 3.0e-55 218.8 155 67.1
Cc10_g14550 Coffea canephora HOM05D006114 ORTHO05D007609 1.1e-54 216.9 160 65.0
Lsat_1_v5_gn_1_8460 Lactuca sativa HOM05D006114 ORTHO05D007609 2.5e-54 215.7 155 64.5
Nn1g06119 Nelumbo nucifera HOM05D006114 ORTHO05D007609 4.3e-54 214.9 156 62.2
RcHm_v2.0_Chr6g0276341 Rosa chinensis HOM05D006114 ORTHO05D007609 4.3e-54 214.9 155 63.9
MD10G1022100 Malus domestica HOM05D006114 ORTHO05D007609 9.5e-54 213.8 155 63.9
TAR381G1603 Trochodendron aralioides HOM05D006114 ORTHO05D007609 1.6e-53 213.0 156 62.2
Lj7A371T45 Lonicera japonica HOM05D006114 ORTHO05D007609 2.1e-53 212.6 156 63.5
Actinidia15143 Actinidia chinensis HOM05D006114 ORTHO05D007609 2.8e-53 212.2 156 64.1
ECA247G0840 Erigeron canadensis HOM05D006114 ORTHO05D007609 4.7e-53 211.5 158 62.7
Ciclev10001576m.g Citrus clementina HOM05D006114 ORTHO05D007609 6.2e-53 211.1 141 70.2
Hma1.2p1_0616F.1_g190010 Hydrangea macrophylla HOM05D006114 ORTHO05D007609 6.2e-53 211.1 151 65.6
EL10Ac7g15790 Beta vulgaris HOM05D006114 ORTHO05D007609 1.1e-52 210.3 153 63.4
Manes.02G177800 Manihot esculenta HOM05D006114 ORTHO05D007609 1.1e-52 210.3 141 69.5
Ah.08g215970 Amaranthus hybridus HOM05D006114 ORTHO05D007609 1.4e-52 209.9 156 62.8
TPR.G36696 Trifolium pratense HOM05D006114 ORTHO05D007609 2.4e-52 209.1 149 63.1
TAR625G1556 Trochodendron aralioides HOM05D006114 ORTHO05D007609 3.1e-52 208.8 156 62.2
Cpa.g.sc21.182 Carica papaya HOM05D006114 ORTHO05D007609 4.0e-52 208.4 140 70.0
DCAR_010096 Daucus carota HOM05D006114 ORTHO05D007609 4.0e-52 208.4 155 63.2
Eucgr.F02716 Eucalyptus grandis HOM05D006114 ORTHO05D007609 4.0e-52 208.4 155 63.9
Rhsim05G0182400 Rhododendron simsii HOM05D006114 ORTHO05D007609 4.0e-52 208.4 158 65.2
HanXRQChr02g0039921 Helianthus annuus HOM05D006114 ORTHO05D007609 8.9e-52 207.2 155 63.2
Lj2g0010896 Lotus japonicus HOM05D006114 ORTHO05D007609 8.9e-52 207.2 141 66.7
Ca_27292_v3 Cicer arietinum L. HOM05D006114 ORTHO05D007609 2.0e-51 206.1 149 61.7
Sabra02G0054600 Salix brachista HOM05D006114 ORTHO05D007609 2.0e-51 206.1 141 69.5
AUR62039242 Chenopodium quinoa HOM05D006114 ORTHO05D007609 2.6e-51 205.7 157 61.8
Hund26709 Selenicereus undatus HOM05D006114 ORTHO05D000105 2.6e-51 205.7 145 66.2
CiPaw.16G014300 Carya illinoinensis HOM05D006114 ORTHO05D007609 3.4e-51 205.3 157 61.8
Medtr6g034935 Medicago truncatula HOM05D006114 ORTHO05D007609 4.4e-51 204.9 143 66.4
PSO675G2834 Papaver somniferum HOM05D006114 ORTHO05D007609 7.6e-51 204.1 156 59.6
PSO541G3056 Papaver somniferum HOM05D006114 ORTHO05D007609 9.9e-51 203.8 156 59.0
VMungo0464G2055 Vigna mungo HOM05D006114 ORTHO05D007609 1.3e-50 203.4 141 66.0
FAN24G0263 Fragaria x ananassa HOM05D006114 ORTHO05D007609 1.7e-50 203.0 143 65.0
Nitab4.5_0000032g0440 Nicotiana tabacum HOM05D006114 ORTHO05D007609 1.7e-50 203.0 144 65.3
FAN27G1342 Fragaria x ananassa HOM05D006114 ORTHO05D007609 2.2e-50 202.6 143 65.0
Lalb_Chr19g0130321 Lupinus albus HOM05D006114 ORTHO05D007609 2.2e-50 202.6 160 60.0
AUR62009796 Chenopodium quinoa HOM05D006114 ORTHO05D007609 2.9e-50 202.2 155 62.6
TWI34G0188 Tripterygium wilfordii HOM05D006114 ORTHO05D007609 2.9e-50 202.2 146 63.7
TWI32G1226 Tripterygium wilfordii HOM05D006114 ORTHO05D007609 3.8e-50 201.8 146 63.7
PGR042G1057 Punica granatum HOM05D006114 ORTHO05D007609 6.4e-50 201.1 140 67.1
PGR122G0006 Punica granatum HOM05D006114 ORTHO05D007609 6.4e-50 201.1 140 67.1
Aqoxy5G02132 Aquilegia oxysepala HOM05D006114 ORTHO05D007609 8.4e-50 200.7 156 58.3
Psat0s3019g0080 Pisum sativum HOM05D006114 ORTHO05D007609 8.4e-50 200.7 145 62.1
Atru.chr13.2189 Acer truncatum HOM05D006114 ORTHO05D007609 2.4e-49 199.1 142 68.3
Phvul.004G097500 Phaseolus vulgaris HOM05D006114 ORTHO05D007609 5.4e-49 198.0 141 63.8
Dinv41097 Davidia involucrata HOM05D006114 ORTHO05D007609 9.2e-49 197.2 144 64.6
Sed0024386 Sechium edule HOM05D006114 ORTHO05D007609 9.2e-49 197.2 153 60.1
QL02p024207 Quercus lobata HOM05D006114 ORTHO05D007609 2.1e-48 196.1 151 59.6
AL2G37050 Arabidopsis lyrata HOM05D006114 ORTHO05D007609 1.0e-47 193.7 141 63.8
Carub.0002s2378 Capsella rubella HOM05D006114 ORTHO05D007609 1.0e-47 193.7 141 63.8
SpUn0346_0010 Schrenkiella parvula HOM05D006114 ORTHO05D007609 1.3e-47 193.4 141 63.8
BcaB05g25019 Brassica carinata HOM05D006114 ORTHO05D007609 2.3e-47 192.6 136 66.9
AT1G76920 Arabidopsis thaliana HOM05D006114 ORTHO05D007609 3.0e-47 192.2 141 63.1
Potri.002G069900 Populus trichocarpa HOM05D006114 ORTHO05D007609 3.0e-47 192.2 141 64.5
Potri.005G190400 Populus trichocarpa HOM05D006114 ORTHO05D007609 1.9e-46 189.5 139 64.0
THA.LOC104813707 Tarenaya hassleriana HOM05D006114 ORTHO05D007609 1.9e-46 189.5 141 61.0
Thhalv10019824m.g Eutrema salsugineum HOM05D006114 ORTHO05D007609 2.5e-46 189.1 136 64.0
Glyma.02G083400 Glycine max HOM05D006114 ORTHO05D007609 3.3e-46 188.7 153 57.5
COL.COLO4_24672 Corchorus olitorius HOM05D006114 ORTHO05D007609 4.3e-46 188.3 141 65.2
BcaB02g07084 Brassica carinata HOM05D006114 ORTHO05D007609 7.3e-46 187.6 144 62.5
BcaC08g45501 Brassica carinata HOM05D006114 ORTHO05D007609 9.6e-46 187.2 136 65.4
A07p28250 Brassica napus HOM05D006114 ORTHO05D007609 9.6e-46 187.2 136 65.4
C06p31720 Brassica napus HOM05D006114 ORTHO05D007609 9.6e-46 187.2 136 65.4
BolC6t38302H Brassica oleracea HOM05D006114 ORTHO05D007609 9.6e-46 187.2 136 65.4
BraA07t30466Z Brassica rapa HOM05D006114 ORTHO05D007609 9.6e-46 187.2 136 65.4
Duzib116G0820 Durio zibethinus HOM05D006114 ORTHO05D007609 1.3e-45 186.8 141 65.2
Aa31LG4G6950 Aethionema arabicum HOM05D006114 ORTHO05D007609 3.6e-45 185.3 141 61.0
Gohir.D05G271900 Gossypium hirsutum HOM05D006114 ORTHO05D007609 3.6e-45 185.3 141 63.8
Gorai.009G284900 Gossypium raimondii HOM05D006114 ORTHO05D007609 3.6e-45 185.3 141 63.8
Gohir.A05G269900 Gossypium hirsutum HOM05D006114 ORTHO05D007609 8.1e-45 184.1 141 63.1
THA.LOC104812044 Tarenaya hassleriana HOM05D006114 ORTHO05D007609 8.1e-45 184.1 141 58.9
MBI17_g34067_MAGBIO Magnolia biondii HOM05D006114 ORTHO05D007609 1.4e-44 183.3 146 66.4
Duzib041G0274 Durio zibethinus HOM05D006114 ORTHO05D007609 1.5e-43 179.9 141 63.1
unitig_26.g9903 Utricularia gibba HOM05D006114 ORTHO05D007609 1.3e-42 176.8 110 76.4
Thecc.08G149100 Theobroma cacao HOM05D006114 ORTHO05D007609 6.4e-42 174.5 141 61.0
Medtr6g049050 Medicago truncatula HOM05D006114 ORTHO05D007609 1.9e-41 172.9 155 51.0
Zm00001eb434300 Zea mays HOM05D006114 ORTHO05D007609 1.0e-39 167.2 161 50.9
Os04g0686700 Oryza sativa ssp. japonica HOM05D006114 ORTHO05D007609 2.3e-39 166.0 162 50.6
HPP92_009302 Vanilla planifolia HOM05D006114 ORTHO05D007609 3.3e-38 162.2 164 50.6
Migut.N03218 Erythranthe guttata HOM05D006114 ORTHO05D007609 9.6e-38 160.6 99 73.7
Sed0010814 Sechium edule HOM05D006114 ORTHO05D007609 1.3e-37 160.2 142 53.5
Lj7A371T46 Lonicera japonica HOM05D006114 ORTHO05D007609 9.0e-36 154.1 156 51.9
Zm00001eb076050 Zea mays HOM05D006114 ORTHO05D007609 4.9e-34 148.3 145 51.0
SEGI_30218 Sequoiadendron giganteum HOM05D006114 ORTHO05D007609 6.7e-31 137.9 138 49.3
Zm00001eb268540 Zea mays HOM05D006114 ORTHO05D007609 2.1e-29 132.9 138 49.3
AUR62009795 Chenopodium quinoa HOM05D006114 ORTHO05D007609 1.4e-28 130.2 150 46.0
AUR62039241 Chenopodium quinoa HOM05D006114 ORTHO05D007609 3.4e-27 125.6 147 45.6
Zm00001eb182860 Zea mays HOM05D006114 ORTHO05D007609 3.4e-27 125.6 144 46.5
Oeu046020.2 Olea europaea HOM05D006114 ORTHO05D007609 4.8e-21 105.1 155 38.1
Zm00001eb268560 Zea mays HOM05D006114 ORTHO05D007609 1.5e-19 100.1 107 49.5
CARHR070420 Cardamine hirsuta HOM05D006114 ORTHO05D007609 4.2e-17 92.0 64 62.5
Zm00001eb080980 Zea mays HOM05D006114 ORTHO05D007609 1.2e-16 90.5 105 48.6
GSVIVG01034899001 Vitis vinifera HOM05D006114 ORTHO05D007609 2.3e-15 86.3 155 32.3
arahy.Tifrunner.gnm1.ann1.0BPN3L Arachis hypogaea HOM05D000034 ORTHO05D000037 6.9e-12 74.7 58 60.3
ATR0772G199 Amborella trichopoda HOM05D006114 ORTHO05D007609 6.1e-08 61.6 60 48.3


User provided reference genes

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