Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold48G17955 Striga asiatica HOM05D001093 ORTHO05D000743 8.8e-302 1039.6 584 100.0
Solyc04g009400.4 Solanum lycopersicum HOM05D001093 ORTHO05D000743 3.3e-22 110.9 147 41.5
Sopen04g004530 Solanum pennellii HOM05D001093 ORTHO05D000743 3.3e-22 110.9 147 41.5
Migut.N03229 Erythranthe guttata HOM05D001093 ORTHO05D000743 4.3e-22 110.5 87 58.6
PGSC0003DMG400032558 Solanum tuberosum HOM05D001093 ORTHO05D000743 4.3e-22 110.5 135 47.4
Nitab4.5_0013462g0030 Nicotiana tabacum HOM05D001093 ORTHO05D000743 3.1e-20 104.4 52 78.8
Dinv41107 Davidia involucrata HOM05D001093 ORTHO05D000743 1.5e-19 102.1 101 46.5
Nitab4.5_0004105g0040 Nicotiana tabacum HOM05D001093 ORTHO05D000743 2.6e-19 101.3 50 80.0
Peaxi162Scf00842g00328 Petunia axillaris HOM05D001093 ORTHO05D000743 5.8e-19 100.1 119 47.9
Lj7A367T45 Lonicera japonica HOM05D001093 ORTHO05D000743 9.9e-19 99.4 103 45.6
Sopen04g021630 Solanum pennellii HOM05D001093 ORTHO05D000743 4.9e-18 97.1 91 51.6
HanXRQChr09g0258361 Helianthus annuus HOM05D001093 ORTHO05D000743 3.2e-17 94.4 69 55.1
Lsat_1_v5_gn_8_117260 Lactuca sativa HOM05D001093 ORTHO05D000743 9.3e-17 92.8 72 51.4
Migut.C01024 Erythranthe guttata HOM05D001093 ORTHO05D000743 1.6e-16 92.0 205 36.6
CSS0005802 Camellia sinensis var. sinensis HOM05D001093 ORTHO05D000743 2.1e-16 91.7 169 36.7
QL02p024630 Quercus lobata HOM05D001093 ORTHO05D000743 2.1e-16 91.7 86 52.3
CAN.G4.14 Capsicum annuum HOM05D001093 ORTHO05D000743 1.0e-15 89.4 53 66.0
Actinidia01147 Actinidia chinensis HOM05D001093 ORTHO05D000743 1.3e-15 89.0 201 35.8
Nitab4.5_0000504g0100 Nicotiana tabacum HOM05D001093 ORTHO05D000743 1.1e-14 85.9 52 65.4
Nitab4.5_0004819g0010 Nicotiana tabacum HOM05D001093 ORTHO05D000743 1.1e-14 85.9 52 65.4
SalBow6G2465 Salvia bowleyana HOM05D001093 ORTHO05D000743 1.9e-14 85.1 132 37.1
CSS0044048 Camellia sinensis var. sinensis HOM05D001093 ORTHO05D000743 5.6e-14 83.6 213 33.3
Dinv25836 Davidia involucrata HOM05D001093 ORTHO05D000743 7.3e-14 83.2 53 62.3
Peaxi162Scf01184g00141 Petunia axillaris HOM05D001093 ORTHO05D000743 9.6e-14 82.8 49 61.2
Sopen04g004510 Solanum pennellii HOM05D001093 ORTHO05D030672 9.6e-14 82.8 86 44.2
Solyc04g009390.2 Solanum lycopersicum HOM05D001093 ORTHO05D000743 1.3e-13 82.4 86 44.2
Sabra05G0144700 Salix brachista HOM05D001093 ORTHO05D000743 1.6e-13 82.0 89 44.9
ECA232G2941 Erigeron canadensis HOM05D001093 ORTHO05D000743 2.8e-13 81.3 55 56.4
Cpa.g.sc49.46 Carica papaya HOM05D001093 ORTHO05D000743 3.6e-13 80.9 66 54.5
Peaxi162Scf00071g00201 Petunia axillaris HOM05D001093 ORTHO05D000743 3.6e-13 80.9 53 62.3
Migut.C01022 Erythranthe guttata HOM05D001093 ORTHO05D000743 2.4e-12 78.2 62 54.8
Potri.005G189400 Populus trichocarpa HOM05D001093 ORTHO05D000743 2.4e-12 78.2 73 47.9
Thecc.08G147000 Theobroma cacao HOM05D001093 ORTHO05D000743 2.4e-12 78.2 51 60.8
Sed0006161 Sechium edule HOM05D001093 ORTHO05D000743 6.9e-12 76.6 49 59.2
Lsat_1_v5_gn_3_107161 Lactuca sativa HOM05D001093 ORTHO05D000743 1.2e-11 75.9 112 34.8
Haze_17729 Corylus avellana HOM05D000026 ORTHO05D001292 1.5e-11 75.5 112 39.3
Eucgr.F02722 Eucalyptus grandis HOM05D001093 ORTHO05D000743 2.0e-11 75.1 50 56.0
TPR.G37844 Trifolium pratense HOM05D001093 ORTHO05D000743 2.0e-11 75.1 87 41.4
Psat0s667g0160 Pisum sativum HOM05D001093 ORTHO05D000743 2.6e-11 74.7 86 39.5
PGR042G0583 Punica granatum HOM05D001093 ORTHO05D000743 2.6e-11 74.7 93 38.7
Cc10_g14180 Coffea canephora HOM05D001093 ORTHO05D000743 3.4e-11 74.3 193 31.6
CsaV3_7G024810 Cucumis sativus L. HOM05D001093 ORTHO05D000743 3.4e-11 74.3 67 43.3
Cpa.g.sc49.44 Carica papaya HOM05D001093 ORTHO05D000743 7.6e-11 73.2 112 38.4
ECA236G3128 Erigeron canadensis HOM05D001093 ORTHO05D000743 7.6e-11 73.2 51 54.9
Manes.18G089400 Manihot esculenta HOM05D001093 ORTHO05D000743 9.9e-11 72.8 54 51.9
CANSAT25G1318 Cannabis sativa HOM05D001093 ORTHO05D000743 1.7e-10 72.0 82 41.5
TPR.G39589 Trifolium pratense HOM05D001093 ORTHO05D000743 1.7e-10 72.0 61 52.5
THA.LOC104806851 Tarenaya hassleriana HOM05D001093 ORTHO05D000743 2.2e-10 71.6 51 51.0
Ca_19334_v3 Cicer arietinum L. HOM05D001093 ORTHO05D000743 3.8e-10 70.9 66 47.0
MELO3C024101.2 Cucumis melo HOM05D001093 ORTHO05D000743 4.9e-10 70.5 49 53.1
Lj2g0007742 Lotus japonicus HOM05D001093 ORTHO05D000743 4.9e-10 70.5 66 50.0
Medtr1g099270 Medicago truncatula HOM05D001093 ORTHO05D000743 8.4e-10 69.7 67 49.3
Psat1g092320 Pisum sativum HOM05D001093 ORTHO05D000743 8.4e-10 69.7 81 45.7
TWI60G1406 Tripterygium wilfordii HOM05D001093 ORTHO05D000743 1.1e-09 69.3 52 57.7
Lj2g0008242 Lotus japonicus HOM05D001093 ORTHO05D000743 1.4e-09 68.9 58 51.7
FAN11G1971 Fragaria x ananassa HOM05D001093 ORTHO05D000743 1.9e-09 68.6 62 51.6
MD05G1018500 Malus domestica HOM05D001093 ORTHO05D000743 4.2e-09 67.4 52 53.8
Ca_10694_v3 Cicer arietinum L. HOM05D001093 ORTHO05D000743 5.4e-09 67.0 49 57.1
AT1G43770 Arabidopsis thaliana HOM05D001093 ORTHO05D000743 7.1e-09 66.6 55 41.8
Migut.C01023 Erythranthe guttata HOM05D001093 ORTHO05D000743 7.1e-09 66.6 177 30.5
FvH4_3g26810 Fragaria vesca HOM05D001093 ORTHO05D000743 7.1e-09 66.6 59 52.5
MD10G1018200 Malus domestica HOM05D001093 ORTHO05D000743 7.1e-09 66.6 52 51.9
Medtr6g044600 Medicago truncatula HOM05D001093 ORTHO05D000743 7.1e-09 66.6 69 44.9
Nn1g06166 Nelumbo nucifera HOM05D001093 ORTHO05D000743 7.1e-09 66.6 49 51.0
Psat6g194360 Pisum sativum HOM05D001093 ORTHO05D000743 7.1e-09 66.6 78 43.6
TPR.G3629 Trifolium pratense HOM05D001093 ORTHO05D000743 7.1e-09 66.6 58 50.0
Atru.chr5.93 Acer truncatum HOM05D001093 ORTHO05D000743 9.3e-09 66.2 157 31.2
TPR.G36655 Trifolium pratense HOM05D001093 ORTHO05D000743 9.3e-09 66.2 58 50.0
Psat1g092360 Pisum sativum HOM05D001093 ORTHO05D000743 1.2e-08 65.9 105 37.1
arahy.Tifrunner.gnm1.ann1.U9V461 Arachis hypogaea HOM05D001093 ORTHO05D000743 1.6e-08 65.5 135 34.8
Glyma.10G227200 Glycine max HOM05D001093 ORTHO05D000743 1.6e-08 65.5 49 53.1
Atru.chr13.2237 Acer truncatum HOM05D001093 ORTHO05D000743 2.1e-08 65.1 152 29.6
DCAR_014418 Daucus carota HOM05D001093 ORTHO05D000743 2.1e-08 65.1 54 48.1
TPR.G7732 Trifolium pratense HOM05D001093 ORTHO05D000743 2.1e-08 65.1 49 57.1
arahy.Tifrunner.gnm1.ann1.UWTZ29 Arachis hypogaea HOM05D001093 ORTHO05D000743 3.5e-08 64.3 49 59.2
Glyma.10G227100 Glycine max HOM05D001093 ORTHO05D000743 3.5e-08 64.3 48 54.2
Glyma.06G230000 Glycine max HOM05D001093 ORTHO05D000743 4.6e-08 63.9 116 36.2
Carub.0001s3475 Capsella rubella HOM05D001093 ORTHO05D000743 6.0e-08 63.5 49 44.9
AL1G51850 Arabidopsis lyrata HOM05D001093 ORTHO05D000743 7.9e-08 63.2 49 42.9
AL1G51860 Arabidopsis lyrata HOM05D001093 ORTHO05D000743 7.9e-08 63.2 49 42.9
Ciclev10000763m.g Citrus clementina HOM05D001093 ORTHO05D000743 7.9e-08 63.2 141 29.8
Glyma.20G165200 Glycine max HOM05D001093 ORTHO05D000743 7.9e-08 63.2 48 54.2
RcHm_v2.0_Chr6g0276691 Rosa chinensis HOM05D001093 ORTHO05D000743 7.9e-08 63.2 52 53.8
Sabra05G0130700 Salix brachista HOM05D001093 ORTHO05D000743 7.9e-08 63.2 47 53.2
arahy.Tifrunner.gnm1.ann1.R6W0QQ Arachis hypogaea HOM05D001093 ORTHO05D000743 1.0e-07 62.8 49 55.1
Duzib116G0600 Durio zibethinus HOM05D001093 ORTHO05D000743 1.0e-07 62.8 143 32.2
Lsat_1_v5_gn_3_106880 Lactuca sativa HOM05D001093 ORTHO05D000743 1.0e-07 62.8 35 65.7
Medtr5g098320 Medicago truncatula HOM05D001093 ORTHO05D000743 3.0e-07 61.2 51 52.9
Potri.005G173200 Populus trichocarpa HOM05D001093 ORTHO05D000743 5.1e-07 60.5 126 32.5
CSS0045835 Camellia sinensis var. sinensis HOM05D001093 ORTHO05D000743 6.6e-07 60.1 53 45.3
PSO541G4687 Papaver somniferum HOM05D020760 ORTHO05D019682 8.7e-07 59.7 49 44.9
PSO675G3366 Papaver somniferum HOM05D020760 ORTHO05D019682 8.7e-07 59.7 49 44.9
Sc02g0004330 Simmondsia chinensis HOM05D001093 ORTHO05D000743 8.7e-07 59.7 117 28.2
HPP92_004390 Vanilla planifolia HOM05D001093 ORTHO05D000743 8.7e-07 59.7 48 43.8
Lalb_Chr06g0161481 Lupinus albus HOM05D001093 ORTHO05D000743 1.1e-06 59.3 111 28.8
Glyma.09G125400 Glycine max HOM05D001093 ORTHO05D000743 1.5e-06 58.9 167 30.5
Medtr2g006220 Medicago truncatula HOM05D001093 ORTHO05D000743 1.5e-06 58.9 105 36.2
Phvul.007G078100 Phaseolus vulgaris HOM05D001093 ORTHO05D000743 1.5e-06 58.9 121 33.9
Hund26716 Selenicereus undatus HOM05D001093 ORTHO05D000743 1.5e-06 58.9 50 42.0
VMungo1309G3100 Vigna mungo HOM05D001093 ORTHO05D000743 1.5e-06 58.9 48 52.1
Aa31LG6G9690 Aethionema arabicum HOM05D001093 ORTHO05D000743 2.5e-06 58.2 159 27.7
AUR62041714 Chenopodium quinoa HOM05D001093 ORTHO05D000743 4.3e-06 57.4 50 40.0
Dinv24318 Davidia involucrata HOM05D001093 ORTHO05D000743 4.3e-06 57.4 52 42.3
Sp1g32760 Schrenkiella parvula HOM05D001093 ORTHO05D000743 4.3e-06 57.4 50 42.0
Dinv11327 Davidia involucrata HOM05D001093 ORTHO05D000743 5.6e-06 57.0 102 28.4
Lj4C851G10 Lonicera japonica HOM05D001093 ORTHO05D000743 5.6e-06 57.0 54 40.7
PSO675G5826 Papaver somniferum HOM05D000439 ORTHO05D001363 5.6e-06 57.0 51 41.2
Aqoxy5G00961 Aquilegia oxysepala HOM05D020760 ORTHO05D019682 9.6e-06 56.2 65 40.0
arahy.Tifrunner.gnm1.ann1.43LRWI Arachis hypogaea HOM05D001093 ORTHO05D000743 9.6e-06 56.2 122 33.6
PSO541G3118 Papaver somniferum HOM05D000439 ORTHO05D001363 9.6e-06 56.2 51 41.2


User provided reference genes

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