Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold48G17928 Striga asiatica HOM05D004728 ORTHO05D002375 1.8e-77 292.7 176 100.0
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 3.2e-29 132.5 165 57.6
MSTRG.1389 Avicennia marina HOM05D004728 ORTHO05D002375 5.1e-27 125.2 182 56.6
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 1.8e-24 116.7 178 52.2
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.4e-16 90.5 156 42.9
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 6.9e-16 88.2 119 48.7
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.2e-15 87.4 157 41.4
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 5.8e-15 85.1 120 48.3
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 7.6e-15 84.7 122 52.5
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 1.7e-14 83.6 147 43.5
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 3.8e-14 82.4 123 37.4
MSTRG.1388 Avicennia marina HOM05D004728 ORTHO05D002375 4.9e-14 82.0 133 45.1
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 4.9e-14 82.0 159 40.3
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 6.4e-14 81.6 111 52.3
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 1.1e-13 80.9 119 49.6
Gohir.A05G223100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.4e-13 80.5 121 48.8
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 1.9e-13 80.1 121 47.1
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 1.9e-13 80.1 155 40.0
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 3.2e-13 79.3 119 52.1
HanXRQChr09g0250741 Helianthus annuus HOM05D004728 ORTHO05D002375 3.2e-13 79.3 123 45.5
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 5.4e-13 78.6 119 48.7
Migut.C01161 Erythranthe guttata HOM05D004728 ORTHO05D002375 5.4e-13 78.6 155 41.3
SGA_v2.0_scaffold24G10482 Striga asiatica HOM05D004728 ORTHO05D002375 9.3e-13 77.8 131 54.2
Gohir.D05G225800 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.2e-12 77.4 121 42.1
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 1.6e-12 77.0 116 47.4
SGA_v2.0_scaffold52G18993 Striga asiatica HOM05D004728 ORTHO05D002375 1.6e-12 77.0 135 50.4
Thecc.08G100900 Theobroma cacao HOM05D004728 ORTHO05D002375 1.6e-12 77.0 147 40.8
Duzib116G0314 Durio zibethinus HOM05D004728 ORTHO05D002375 2.1e-12 76.6 119 52.1
CiPaw.16G032400 Carya illinoinensis HOM05D004728 ORTHO05D002375 2.7e-12 76.3 120 46.7
EL10Ac1g01137 Beta vulgaris HOM05D004728 ORTHO05D002375 4.6e-12 75.5 121 35.5
Lj4A728T44 Lonicera japonica HOM05D004728 ORTHO05D002375 4.6e-12 75.5 150 45.3
Oeu000784.1 Olea europaea HOM05D004728 ORTHO05D002375 4.6e-12 75.5 122 44.3
Oeu045992.1 Olea europaea HOM05D004728 ORTHO05D002375 6.0e-12 75.1 134 48.5
DCAR_012879 Daucus carota HOM05D004728 ORTHO05D002375 3.0e-11 72.8 136 45.6
Actinidia33119 Actinidia chinensis HOM05D004728 ORTHO05D002375 3.9e-11 72.4 133 42.9
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 1.9e-10 70.1 126 45.2
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 3.3e-10 69.3 105 50.5
vmacro04704 Vaccinium macrocarpon HOM05D004728 ORTHO05D002375 3.3e-10 69.3 121 47.1
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 4.3e-10 68.9 112 47.3
unitig_0.g2111 Utricularia gibba HOM05D004728 ORTHO05D002375 7.4e-10 68.2 115 45.2
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 1.3e-09 67.4 144 41.7
ECA247G2878 Erigeron canadensis HOM05D004728 ORTHO05D002375 1.3e-09 67.4 137 42.3
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 1.3e-09 67.4 139 41.7
QL02p002263 Quercus lobata HOM05D004728 ORTHO05D002375 1.3e-09 67.4 87 59.8
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 1.3e-09 67.4 124 44.4
Lj4A728T43 Lonicera japonica HOM05D004728 ORTHO05D002375 1.6e-09 67.0 103 36.9
Sc01g0000880 Simmondsia chinensis HOM05D004728 ORTHO05D002375 1.6e-09 67.0 104 49.0
Hma1.2p1_1180F.1_g264660 Hydrangea macrophylla HOM05D004728 ORTHO05D002375 2.1e-09 66.6 110 47.3
Rhsim07G0205400 Rhododendron simsii HOM05D004728 ORTHO05D002375 2.1e-09 66.6 115 44.3
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 3.7e-09 65.9 122 37.7
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 3.7e-09 65.9 118 44.1
arahy.Tifrunner.gnm1.ann1.9U5DT8 Arachis hypogaea HOM05D012119 ORTHO05D002375 4.8e-09 65.5 137 41.6
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 4.8e-09 65.5 116 47.4
ECA247G3235 Erigeron canadensis HOM05D004728 ORTHO05D002375 4.8e-09 65.5 129 38.8
Gorai.009G233200 Gossypium raimondii HOM05D004728 ORTHO05D002375 4.8e-09 65.5 149 39.6
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 4.8e-09 65.5 115 28.7
arahy.Tifrunner.gnm1.ann1.RDUL0C Arachis hypogaea HOM05D012119 ORTHO05D002375 6.2e-09 65.1 137 41.6
HanXRQChr05g0149651 Helianthus annuus HOM05D004728 ORTHO05D002375 6.2e-09 65.1 117 41.0
SalBow7G1327 Salvia bowleyana HOM05D004728 ORTHO05D002375 8.1e-09 64.7 115 42.6
COL.COLO4_11993 Corchorus olitorius HOM05D004728 ORTHO05D002375 1.1e-08 64.3 111 44.1
Lsat_1_v5_gn_1_2860 Lactuca sativa HOM05D004728 ORTHO05D002375 1.1e-08 64.3 125 41.6
Actinidia10350 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.4e-08 63.9 108 46.3
DCAR_012878 Daucus carota HOM05D004728 ORTHO05D002375 1.4e-08 63.9 139 40.3
Gohir.A02G076900 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.4e-08 63.9 113 46.0
Gorai.005G094700 Gossypium raimondii HOM05D004728 ORTHO05D002375 1.4e-08 63.9 113 46.0
Hund26995 Selenicereus undatus HOM05D004728 ORTHO05D002375 1.4e-08 63.9 126 44.4
Migut.H02321 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.8e-08 63.5 116 41.4
Hund14099 Selenicereus undatus HOM05D004728 ORTHO05D002375 1.8e-08 63.5 116 45.7
Lj2A538G23 Lonicera japonica HOM05D004728 ORTHO05D002375 3.1e-08 62.8 108 32.4
Lj4A95G12 Lonicera japonica HOM05D004728 ORTHO05D002375 3.1e-08 62.8 135 40.7
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 3.1e-08 62.8 122 37.7
Migut.C01096 Erythranthe guttata HOM05D004728 ORTHO05D002375 4.0e-08 62.4 133 35.3
Migut.L00163 Erythranthe guttata HOM05D004728 ORTHO05D002375 5.3e-08 62.0 120 28.3
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 6.9e-08 61.6 117 41.9
SGA_v2.0_scaffold115G32157 Striga asiatica HOM05D004728 ORTHO05D002375 6.9e-08 61.6 188 35.1
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.2e-07 60.8 117 41.9
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.2e-07 60.8 117 41.9
Gohir.D02G084100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.2e-07 60.8 103 45.6
Lj4A728G42 Lonicera japonica HOM05D004728 ORTHO05D002375 1.5e-07 60.5 100 32.0
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.0e-07 60.1 117 41.0
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.0e-07 60.1 117 41.9
Lsat_1_v5_gn_1_2980 Lactuca sativa HOM05D004728 ORTHO05D002375 2.0e-07 60.1 165 40.6
QL02p002250 Quercus lobata HOM05D004728 ORTHO05D002375 2.0e-07 60.1 99 50.5
FvH4_1g20190 Fragaria vesca HOM05D004728 ORTHO05D002375 2.6e-07 59.7 118 41.5
FAN19G1373 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.6e-07 59.7 118 41.5
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 2.6e-07 59.7 118 42.4
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 3.4e-07 59.3 116 30.2
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 3.4e-07 59.3 116 30.2
Lsat_1_v5_gn_1_2940 Lactuca sativa HOM05D004728 ORTHO05D002375 4.5e-07 58.9 118 36.4
Potri.002G101600 Populus trichocarpa HOM05D004728 ORTHO05D002375 4.5e-07 58.9 129 41.1
MSTRG.3754 Avicennia marina HOM05D004728 ORTHO05D002375 5.8e-07 58.5 107 41.1
Duzib041G0412 Durio zibethinus HOM05D004728 ORTHO05D002375 5.8e-07 58.5 148 39.2
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 5.8e-07 58.5 130 41.5
unitig_747.g21502 Utricularia gibba HOM05D004728 ORTHO05D002375 5.8e-07 58.5 116 44.0
AUR62027821 Chenopodium quinoa HOM05D059013 ORTHO05D002375 7.6e-07 58.2 110 29.1
COL.COLO4_11997 Corchorus olitorius HOM05D004728 ORTHO05D002375 7.6e-07 58.2 118 43.2
FvH4_5g36280 Fragaria vesca HOM05D004728 ORTHO05D002375 7.6e-07 58.2 96 49.0
FAN04G1034 Fragaria x ananassa HOM05D004728 ORTHO05D002375 7.6e-07 58.2 96 49.0
ECA247G0078 Erigeron canadensis HOM05D004728 ORTHO05D002375 9.9e-07 57.8 102 42.2
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 9.9e-07 57.8 128 31.2
arahy.Tifrunner.gnm1.ann1.30DIRF Arachis hypogaea HOM05D012119 ORTHO05D002375 2.9e-06 56.2 126 38.1
DCAR_003461 Daucus carota HOM05D004728 ORTHO05D002375 3.8e-06 55.8 105 25.7
Lj4A95G11 Lonicera japonica HOM05D004728 ORTHO05D002375 4.9e-06 55.5 93 44.1
Eucgr.I02631 Eucalyptus grandis HOM05D007310 ORTHO05D002375 6.4e-06 55.1 118 35.6


User provided reference genes

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