Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 1.8e-99 365.9 187 100.0
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 1.3e-60 236.9 191 70.2
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 6.8e-54 214.5 195 64.1
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 1.6e-47 193.4 194 60.3
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 5.4e-43 178.3 109 78.0
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 2.0e-42 176.4 183 54.1
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 7.7e-42 174.5 174 56.3
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 1.3e-41 173.7 186 57.0
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 1.7e-41 173.3 225 49.8
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 1.7e-41 173.3 192 52.1
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 1.7e-41 173.3 178 55.6
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 2.9e-41 172.6 199 53.8
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 8.6e-41 171.0 207 51.7
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 1.1e-40 170.6 203 53.2
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 5.6e-40 168.3 110 73.6
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 1.6e-39 166.8 170 55.9
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 2.8e-39 166.0 172 54.1
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 1.8e-38 163.3 203 52.2
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 4.0e-38 162.2 188 53.7
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 5.2e-38 161.8 198 52.5
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 1.2e-37 160.6 197 51.8
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 1.2e-37 160.6 106 73.6
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 1.2e-37 160.6 194 53.6
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 2.0e-37 159.8 106 73.6
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 2.0e-37 159.8 106 73.6
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 2.6e-37 159.5 187 52.4
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 2.6e-37 159.5 187 52.4
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 2.6e-37 159.5 187 52.4
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 3.4e-37 159.1 199 51.8
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 4.4e-37 158.7 198 51.0
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 4.4e-37 158.7 187 50.8
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 4.4e-37 158.7 169 52.1
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 5.7e-37 158.3 149 59.7
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 1.7e-36 156.8 195 53.3
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 2.9e-36 156.0 191 51.8
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 2.9e-36 156.0 175 53.7
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 3.7e-36 155.6 196 53.1
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 3.7e-36 155.6 198 53.0
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 8.3e-36 154.5 166 54.2
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 1.8e-35 153.3 209 49.8
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 1.8e-35 153.3 197 54.3
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 4.1e-35 152.1 167 56.9
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 5.4e-35 151.8 189 53.4
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 5.4e-35 151.8 167 56.9
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 1.6e-34 150.2 109 67.9
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 2.7e-34 149.4 206 46.1
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.7e-34 149.4 174 54.6
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.7e-34 149.4 174 54.6
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 3.5e-34 149.1 195 49.7
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 4.6e-34 148.7 189 51.9
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 5.9e-34 148.3 199 48.2
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 5.9e-34 148.3 191 50.8
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 1.0e-33 147.5 191 49.2
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 1.0e-33 147.5 190 48.4
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 1.3e-33 147.1 191 49.2
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 1.7e-33 146.7 164 53.7
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 1.7e-33 146.7 187 48.7
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 2.3e-33 146.4 198 47.5
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 3.0e-33 146.0 101 73.3
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 3.0e-33 146.0 187 51.3
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 3.0e-33 146.0 203 47.3
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 3.0e-33 146.0 167 55.1
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 6.6e-33 144.8 112 67.0
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 8.6e-33 144.4 195 47.2
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 1.5e-32 143.7 182 52.2
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.5e-32 143.7 167 55.1
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 1.9e-32 143.3 104 67.3
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 3.3e-32 142.5 194 48.5
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 7.3e-32 141.4 136 60.3
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 7.3e-32 141.4 184 48.9
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 9.5e-32 141.0 167 54.5
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 1.2e-31 140.6 130 60.8
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 1.2e-31 140.6 163 51.5
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 1.6e-31 140.2 166 49.4
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 2.1e-31 139.8 133 54.9
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 3.6e-31 139.0 199 47.2
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 6.2e-31 138.3 129 58.1
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 1.2e-29 134.0 177 44.6
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 2.6e-29 132.9 126 54.8
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 1.3e-28 130.6 187 44.9
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 1.7e-28 130.2 155 50.3
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 8.3e-28 127.9 153 50.3
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 1.4e-27 127.1 142 53.5
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 9.2e-27 124.4 115 52.2
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 1.6e-26 123.6 123 54.5
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 4.6e-26 122.1 115 50.4
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 8.6e-25 117.9 85 67.1
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 1.2e-23 114.0 190 41.1
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 1.2e-23 114.0 183 45.4
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 2.1e-23 113.2 107 57.9
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 5.8e-21 105.1 69 71.0
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 8.3e-20 101.3 195 41.0
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 3.2e-19 99.4 181 42.0
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 8.1e-15 84.7 114 44.7
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 2.0e-13 80.1 118 42.4
DCAR_009422 Daucus carota HOM05D007220 ORTHO05D009058 2.6e-13 79.7 144 38.9
DCAR_009423 Daucus carota HOM05D007220 ORTHO05D009058 2.6e-13 79.7 144 38.9
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 3.4e-13 79.3 46 78.3
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 9.9e-13 77.8 70 51.4
TAR629G2293 Trochodendron aralioides HOM05D007220 ORTHO05D009058 3.7e-12 75.9 133 39.8
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 4.1e-11 72.4 169 37.3
Sed0003033 Sechium edule HOM05D007220 ORTHO05D009058 1.6e-10 70.5 125 40.8
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 2.1e-10 70.1 164 36.6
Ca_20051_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 3.5e-10 69.3 89 50.6
Prupe.2G280700 Prunus persica HOM05D007220 ORTHO05D009058 6.0e-10 68.6 140 36.4
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 8.6e-09 64.7 60 58.3
MBI12_g25331_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 7.3e-08 61.6 62 54.8


User provided reference genes

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