Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold486G52372 Striga asiatica HOM05D009666 ORTHO05D000277 3.3e-134 481.9 273 100.0
SGA_v2.0_scaffold73G24466 Striga asiatica HOM05D009666 ORTHO05D000277 2.1e-120 436.0 332 78.3
SGA_v2.0_scaffold221G42759 Striga asiatica HOM05D009666 ORTHO05D000277 3.2e-52 209.5 106 98.1
SGA_v2.0_scaffold3145G54282 Striga asiatica HOM05D009666 ORTHO05D000277 4.6e-51 205.7 106 96.2
SGA_v2.0_scaffold265G46065 Striga asiatica HOM05D012189 ORTHO05D000277 6.0e-51 205.3 106 95.3
SGA_v2.0_scaffold61G21154 Striga asiatica HOM05D012899 ORTHO05D401818 3.9e-42 176.0 119 73.1
SGA_v2.0_scaffold235G43663 Striga asiatica HOM05D009666 ORTHO05D000277 3.4e-30 136.3 265 33.6
SGA_v2.0_scaffold409G51096 Striga asiatica HOM05D009666 ORTHO05D000277 1.9e-25 120.6 286 30.4
SGA_v2.0_scaffold3G01632 Striga asiatica HOM05D009666 ORTHO05D000277 3.3e-17 93.2 269 28.6
SGA_v2.0_scaffold387G50510 Striga asiatica HOM05D012189 ORTHO05D000277 7.4e-17 92.0 289 25.6
SGA_v2.0_scaffold258G45776 Striga asiatica HOM05D012189 ORTHO05D000277 5.3e-15 85.9 97 42.3
SGA_v2.0_scaffold174G39206 Striga asiatica HOM05D012189 ORTHO05D000277 9.0e-15 85.1 306 23.5
SGA_v2.0_scaffold103G30052 Striga asiatica HOM05D000034 ORTHO05D000277 3.4e-14 83.2 97 41.2
SGA_v2.0_scaffold113G31702 Striga asiatica HOM05D012189 ORTHO05D000277 1.9e-12 77.4 105 36.2
SGA_v2.0_scaffold312G48277 Striga asiatica HOM05D009666 ORTHO05D000277 2.5e-12 77.0 248 28.6
SGA_v2.0_scaffold38G14973 Striga asiatica HOM05D009666 ORTHO05D400755 4.2e-12 76.3 266 27.4
SGA_v2.0_scaffold115G32137 Striga asiatica HOM05D009666 ORTHO05D000277 1.2e-11 74.7 220 31.4
SGA_v2.0_scaffold26G11373 Striga asiatica HOM05D009666 ORTHO05D000277 2.1e-11 73.9 217 28.1
SGA_v2.0_scaffold201G41338 Striga asiatica HOM05D009666 ORTHO05D406662 7.9e-11 72.0 77 50.6
SGA_v2.0_scaffold13G06594 Striga asiatica HOM05D012189 ORTHO05D000277 3.0e-10 70.1 108 32.4
SGA_v2.0_scaffold149G36516 Striga asiatica HOM05D009666 ORTHO05D402510 4.3e-09 66.2 263 28.1
SGA_v2.0_scaffold26G11283 Striga asiatica HOM05D009666 ORTHO05D000277 4.3e-09 66.2 308 22.7
SGA_v2.0_scaffold318G48489 Striga asiatica HOM05D009666 ORTHO05D401707 1.6e-08 64.3 109 41.3
Migut.F01547 Erythranthe guttata HOM05D000034 ORTHO05D000277 2.8e-08 63.5 106 32.1
SGA_v2.0_scaffold123G33397 Striga asiatica HOM05D000034 ORTHO05D000277 8.2e-08 62.0 90 33.3
SGA_v2.0_scaffold28G12043 Striga asiatica HOM05D009707 ORTHO05D000277 8.2e-08 62.0 90 33.3
SGA_v2.0_scaffold19G08868 Striga asiatica HOM05D009707 ORTHO05D010215 3.1e-07 60.1 109 29.4
SGA_v2.0_scaffold204G41621 Striga asiatica HOM05D012189 ORTHO05D000277 4.1e-07 59.7 81 38.3
Hma1.2p1_0698F.1_g205360 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.3e-07 59.3 96 32.3
Hma1.2p1_0203F.1_g086660 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 9.0e-07 58.5 102 30.4
Hma1.2p1_0207F.1_g087800 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 9.0e-07 58.5 96 32.3
Hma1.2p1_2244F.1_g317920 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 9.0e-07 58.5 96 32.3
Hma1.2p1_2373F.1_g320860 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 9.0e-07 58.5 96 32.3
SGA_v2.0_scaffold98G29366 Striga asiatica HOM05D009666 ORTHO05D406134 9.0e-07 58.5 91 31.9
SGA_v2.0_scaffold68G22817 Striga asiatica HOM05D009707 ORTHO05D010215 1.2e-06 58.2 100 30.0
SGA_v2.0_scaffold3G01771 Striga asiatica HOM05D009707 ORTHO05D010215 1.5e-06 57.8 104 28.8
Hma1.2p1_0096F.1_g047690 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.0e-06 57.4 102 29.4
SGA_v2.0_scaffold102G29874 Striga asiatica HOM05D009707 ORTHO05D000277 2.0e-06 57.4 74 33.8
SGA_v2.0_scaffold195G40829 Striga asiatica HOM05D009666 ORTHO05D000277 2.6e-06 57.0 106 37.7
Hma1.2p1_0325F.1_g126110 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.4e-06 56.6 96 31.2
Hma1.2p1_0388F.1_g142330 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.4e-06 56.6 102 29.4
Hma1.2p1_0587F.1_g184020 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.5e-06 56.2 102 28.4
Hma1.2p1_0633F.1_g192570 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.5e-06 56.2 102 29.4
SGA_v2.0_scaffold214G42275 Striga asiatica HOM05D009707 ORTHO05D010215 4.5e-06 56.2 98 32.7
SGA_v2.0_scaffold70G23408 Striga asiatica HOM05D000228 ORTHO05D001122 4.5e-06 56.2 91 28.6
Hma1.2p1_0232F.1_g097920 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.9e-06 55.8 102 29.4
Hma1.2p1_1929F.1_g307890 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.9e-06 55.8 75 32.0
SGA_v2.0_scaffold327G48784 Striga asiatica HOM05D009707 ORTHO05D010215 5.9e-06 55.8 82 32.9
Hma1.2p1_0480F.1_g161830 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.0e-05 55.1 96 29.2
Hma1.2p1_0672F.1_g201070 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.0e-05 55.1 96 30.2
SalBow1G4864 Salvia bowleyana HOM05D009908 ORTHO05D012008 1.0e-05 55.1 117 29.1
SGA_v2.0_scaffold13G06465 Striga asiatica HOM05D000034 ORTHO05D000277 1.0e-05 55.1 76 34.2
SGA_v2.0_scaffold464G52000 Striga asiatica HOM05D000034 ORTHO05D000037 1.0e-05 55.1 96 31.2


User provided reference genes

Program Settings