Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold481G52321 Striga asiatica HOM05D005182 ORTHO05D006631 3.9e-125 451.4 220 100.0
Migut.H00088 Erythranthe guttata HOM05D005182 ORTHO05D006631 3.0e-85 318.9 216 74.5
SalBow1G7073 Salvia bowleyana HOM05D005182 ORTHO05D006631 3.1e-82 308.9 219 70.8
Cc07_g01870 Coffea canephora HOM05D005182 ORTHO05D006631 6.5e-80 301.2 189 73.5
Nitab4.5_0002682g0020 Nicotiana tabacum HOM05D005182 ORTHO05D006631 4.2e-79 298.5 185 73.0
Solyc02g086560.3 Solanum lycopersicum HOM05D005182 ORTHO05D006631 2.1e-78 296.2 185 74.1
Sopen02g031300 Solanum pennellii HOM05D005182 ORTHO05D006631 1.3e-77 293.5 185 73.5
Nitab4.5_0005432g0010 Nicotiana tabacum HOM05D005182 ORTHO05D006631 1.1e-76 290.4 185 71.4
PGSC0003DMG400000477 Solanum tuberosum HOM05D005182 ORTHO05D006631 2.5e-76 289.3 185 72.4
CAN.G1799.12 Capsicum annuum HOM05D005182 ORTHO05D006631 3.3e-76 288.9 193 69.9
CiPaw.02G035100 Carya illinoinensis HOM05D005182 ORTHO05D006631 4.3e-76 288.5 207 66.7
DCAR_011246 Daucus carota HOM05D005182 ORTHO05D006631 7.4e-76 287.7 186 71.5
TWI12G0687 Tripterygium wilfordii HOM05D005182 ORTHO05D006631 9.0e-74 280.8 186 70.4
TAR629G2348 Trochodendron aralioides HOM05D005182 ORTHO05D006631 1.2e-73 280.4 215 63.7
Dinv35097 Davidia involucrata HOM05D005182 ORTHO05D006631 1.5e-73 280.0 167 76.6
CSS0031267 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 4.5e-73 278.5 174 73.0
Actinidia06755 Actinidia chinensis HOM05D005182 ORTHO05D006631 1.7e-72 276.6 186 68.8
QL02p075210 Quercus lobata HOM05D005182 ORTHO05D006631 2.9e-72 275.8 203 65.0
MD09G1028700 Malus domestica HOM05D005182 ORTHO05D006631 1.1e-71 273.9 188 67.0
ECA246G2600 Erigeron canadensis HOM05D005182 ORTHO05D006631 1.4e-71 273.5 186 68.3
Manes.17G115200 Manihot esculenta HOM05D005182 ORTHO05D006631 1.9e-71 273.1 162 75.9
Haze_14718 Corylus avellana HOM05D005182 ORTHO05D006631 3.2e-71 272.3 212 62.3
Cfa007391 Carpinus fangiana HOM05D005182 ORTHO05D006631 1.2e-70 270.4 213 62.0
Aqoxy3G02839 Aquilegia oxysepala HOM05D005182 ORTHO05D006631 3.6e-70 268.9 177 68.9
Eucgr.J02232 Eucalyptus grandis HOM05D005182 ORTHO05D006631 4.6e-70 268.5 177 69.5
COL.COLO4_29086 Corchorus olitorius HOM05D005182 ORTHO05D006631 6.1e-70 268.1 176 71.6
Cpa.g.c28071.2 Carica papaya HOM05D005182 ORTHO05D006631 7.9e-70 267.7 181 70.2
HanXRQChr17g0548351 Helianthus annuus HOM05D005182 ORTHO05D006631 2.3e-69 266.2 213 61.5
Peaxi162Scf00129g01422 Petunia axillaris HOM05D005182 ORTHO05D006631 3.0e-69 265.8 150 78.0
PGR024G0002 Punica granatum HOM05D005182 ORTHO05D006631 3.0e-69 265.8 171 71.3
THA.LOC104801894 Tarenaya hassleriana HOM05D005182 ORTHO05D006631 3.0e-69 265.8 202 64.4
Gohir.A07G222400 Gossypium hirsutum HOM05D005182 ORTHO05D006631 3.9e-69 265.4 179 68.7
vmacro04855 Vaccinium macrocarpon HOM05D005182 ORTHO05D006631 3.9e-69 265.4 184 69.6
MBI16_g14596_MAGBIO Magnolia biondii HOM05D005182 ORTHO05D006631 6.7e-69 264.6 213 61.0
MD17G1030300 Malus domestica HOM05D005182 ORTHO05D006631 8.7e-69 264.2 215 61.9
Sabra01G0148000 Salix brachista HOM05D005182 ORTHO05D006631 1.9e-68 263.1 186 69.4
Prupe.3G289500 Prunus persica HOM05D005182 ORTHO05D006631 2.5e-68 262.7 169 71.6
Phvul.004G010800 Phaseolus vulgaris HOM05D005182 ORTHO05D006631 3.3e-68 262.3 169 72.8
CANSAT64G2419 Cannabis sativa HOM05D005182 ORTHO05D006631 4.3e-68 261.9 202 64.9
AUR62032437 Chenopodium quinoa HOM05D005182 ORTHO05D006631 4.3e-68 261.9 197 65.0
Peaxi162Scf00304g01217 Petunia axillaris HOM05D005182 ORTHO05D006631 4.3e-68 261.9 148 77.7
Potri.001G178800 Populus trichocarpa HOM05D005182 ORTHO05D006631 4.3e-68 261.9 172 71.5
Gohir.D07G229100 Gossypium hirsutum HOM05D005182 ORTHO05D006631 7.4e-68 261.2 179 68.2
Gorai.001G264200 Gossypium raimondii HOM05D005182 ORTHO05D006631 7.4e-68 261.2 179 68.2
VMungo0464G0237 Vigna mungo HOM05D005182 ORTHO05D006631 7.4e-68 261.2 216 62.0
Nn3g16771 Nelumbo nucifera HOM05D005182 ORTHO05D006631 9.7e-68 260.8 148 78.4
CARHR040200 Cardamine hirsuta HOM05D005182 ORTHO05D006631 1.3e-67 260.4 215 60.5
THA.LOC104807109 Tarenaya hassleriana HOM05D005182 ORTHO05D006631 1.3e-67 260.4 199 64.8
PGR142G3360 Punica granatum HOM05D005182 ORTHO05D006631 2.8e-67 259.2 171 70.8
Thecc.04G015200 Theobroma cacao HOM05D005182 ORTHO05D006631 4.8e-67 258.5 171 69.6
Glyma.05G004900 Glycine max HOM05D005182 ORTHO05D006631 6.3e-67 258.1 161 73.9
Aa31LG10G4000 Aethionema arabicum HOM05D005182 ORTHO05D006631 8.2e-67 257.7 192 65.6
Atru.chr6.2358 Acer truncatum HOM05D005182 ORTHO05D006631 1.1e-66 257.3 145 79.3
CsaV3_5G027220 Cucumis sativus L. HOM05D005182 ORTHO05D006631 1.4e-66 256.9 162 73.5
Carub.0001s3930 Capsella rubella HOM05D005182 ORTHO05D006631 2.4e-66 256.1 201 63.2
RcHm_v2.0_Chr2g0173081 Rosa chinensis HOM05D005182 ORTHO05D006631 2.4e-66 256.1 199 61.8
AUR62024784 Chenopodium quinoa HOM05D005182 ORTHO05D006631 3.1e-66 255.8 146 78.1
Rhsim02G0095200 Rhododendron simsii HOM05D005182 ORTHO05D006631 4.1e-66 255.4 202 62.4
MSTRG.3153 Avicennia marina HOM05D005182 ORTHO05D006631 6.9e-66 254.6 150 79.3
TPR.G14069 Trifolium pratense HOM05D005182 ORTHO05D006631 6.9e-66 254.6 175 69.1
Cfa007386 Carpinus fangiana HOM05D005182 ORTHO05D006631 9.0e-66 254.2 200 60.5
Lj2g0004707 Lotus japonicus HOM05D005182 ORTHO05D006631 9.0e-66 254.2 161 72.7
Sp1g37040 Schrenkiella parvula HOM05D005182 ORTHO05D006631 1.5e-65 253.4 199 62.3
AT1G50170 Arabidopsis thaliana HOM05D005182 ORTHO05D006631 2.0e-65 253.1 200 62.0
Thhalv10011756m.g Eutrema salsugineum HOM05D005182 ORTHO05D006631 2.6e-65 252.7 212 59.4
AL1G57790 Arabidopsis lyrata HOM05D005182 ORTHO05D006631 7.7e-65 251.1 212 59.9
EL10Ac2g02464 Beta vulgaris HOM05D005182 ORTHO05D006631 7.7e-65 251.1 146 76.0
A08p03300 Brassica napus HOM05D005182 ORTHO05D006631 7.7e-65 251.1 196 60.2
Ciclev10016757m.g Citrus clementina HOM05D005182 ORTHO05D006631 7.7e-65 251.1 145 78.6
ATR0661G518 Amborella trichopoda HOM05D005182 ORTHO05D006631 1.0e-64 250.8 212 59.4
MELO3C021568.2 Cucumis melo HOM05D005182 ORTHO05D006631 1.0e-64 250.8 154 74.0
Psat1g190920 Pisum sativum HOM05D005182 ORTHO05D006631 1.7e-64 250.0 148 77.0
FAN21G0797 Fragaria x ananassa HOM05D005182 ORTHO05D006631 2.2e-64 249.6 161 69.6
Medtr6g005390 Medicago truncatula HOM05D005182 ORTHO05D006631 2.9e-64 249.2 179 67.6
FvH4_3g28470 Fragaria vesca HOM05D005182 ORTHO05D006631 5.0e-64 248.4 161 70.2
FAN11G2673 Fragaria x ananassa HOM05D005182 ORTHO05D006631 5.0e-64 248.4 161 70.2
C03p89510 Brassica napus HOM05D005182 ORTHO05D006631 8.5e-64 247.7 189 62.4
BolC3t21265H Brassica oleracea HOM05D005182 ORTHO05D006631 8.5e-64 247.7 189 62.4
BraA08t32363Z Brassica rapa HOM05D005182 ORTHO05D006631 1.4e-63 246.9 186 62.4
CiPaw.03G042000 Carya illinoinensis HOM05D005182 ORTHO05D006631 1.9e-63 246.5 180 66.1
CDE06G0683 Ceratophyllum demersum HOM05D005182 ORTHO05D006631 1.9e-63 246.5 145 74.5
Ca_04172_v3 Cicer arietinum L. HOM05D005182 ORTHO05D006631 3.2e-63 245.7 179 67.6
Sed0010591 Sechium edule HOM05D005182 ORTHO05D006631 7.2e-63 244.6 162 70.4
Zm00001eb072570 Zea mays HOM05D005182 ORTHO05D006631 3.0e-61 239.2 144 75.0
Rhsim09G0149800 Rhododendron simsii HOM05D005182 ORTHO05D006631 2.2e-59 233.0 188 61.7
Oeu057055.1 Olea europaea HOM05D005182 ORTHO05D006631 6.9e-58 228.0 126 81.7
RcHm_v2.0_Chr7g0219921 Rosa chinensis HOM05D005182 ORTHO05D006631 1.2e-57 227.3 161 67.1
Dinv33456 Davidia involucrata HOM05D005182 ORTHO05D006631 5.9e-57 224.9 170 64.1
unitig_746.g26550 Utricularia gibba HOM05D005182 ORTHO05D006631 2.9e-56 222.6 126 80.2
Hma1.2p1_1291F.1_g273570 Hydrangea macrophylla HOM05D005182 ORTHO05D006631 3.2e-55 219.2 123 78.9
Medtr6g005410 Medicago truncatula HOM05D005182 ORTHO05D006631 5.5e-55 218.4 166 62.0
arahy.Tifrunner.gnm1.ann1.1JMX4I Arachis hypogaea HOM05D005182 ORTHO05D006631 7.2e-55 218.0 149 69.1
CSS0002021 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 9.4e-55 217.6 149 66.4
ClCG00G002150 Citrullus lanatus HOM05D005182 ORTHO05D006631 1.2e-54 217.2 211 55.5
ClCG09G019170 Citrullus lanatus HOM05D005182 ORTHO05D006631 1.2e-54 217.2 211 55.5
GSVIVG01032428001 Vitis vinifera HOM05D005182 ORTHO05D006631 1.6e-54 216.9 123 79.7
arahy.Tifrunner.gnm1.ann1.NIKC7C Arachis hypogaea HOM05D005182 ORTHO05D006631 7.9e-54 214.5 140 70.0
Sed0025592 Sechium edule HOM05D005182 ORTHO05D006631 2.3e-53 213.0 153 64.7
SMO356G0462 Selaginella moellendorffii HOM05D005182 ORTHO05D006631 3.3e-52 209.1 139 65.5
SHI25748 Sapria himalayana HOM05D005182 ORTHO05D006631 1.1e-50 204.1 160 62.5
Pp3c3_11190 Physcomitrium patens HOM05D005182 ORTHO05D006631 2.0e-49 199.9 139 61.9
RcHm_v2.0_Chr1g0351301 Rosa chinensis HOM05D005182 ORTHO05D006631 2.5e-47 193.0 161 59.0
Psat1g058400 Pisum sativum HOM05D005182 ORTHO05D006631 1.6e-46 190.3 139 61.2
BcaC01g01215 Brassica carinata HOM05D005182 ORTHO05D006631 3.6e-46 189.1 189 50.8
MSTRG.15523 Avicennia marina HOM05D005182 ORTHO05D006631 1.4e-45 187.2 120 74.2
Sc19g0005880 Simmondsia chinensis HOM05D005182 ORTHO05D006631 1.8e-45 186.8 185 50.8
arahy.Tifrunner.gnm1.ann1.0YQ56L Arachis hypogaea HOM05D005182 ORTHO05D006631 5.2e-45 185.3 152 58.6
Cpa.g.sc130.27 Carica papaya HOM05D005182 ORTHO05D006631 1.5e-44 183.7 113 77.0
CBR_g4824 Chara braunii HOM05D005182 ORTHO05D006631 1.5e-44 183.7 140 60.0
Psat1g058360 Pisum sativum HOM05D005182 ORTHO05D006631 1.5e-44 183.7 141 57.4
Hund03875 Selenicereus undatus HOM05D005182 ORTHO05D006631 3.7e-43 179.1 108 74.1
Os02g0296800 Oryza sativa ssp. japonica HOM05D005182 ORTHO05D006631 4.8e-43 178.7 107 74.8
SEGI_02514 Sequoiadendron giganteum HOM05D005182 ORTHO05D006631 4.8e-43 178.7 118 70.3
CiPaw.02G035200 Carya illinoinensis HOM05D005182 ORTHO05D006631 8.2e-43 177.9 99 77.8
QL09p000526 Quercus lobata HOM05D005182 ORTHO05D006631 1.4e-42 177.2 99 76.8
Cpa.g.sc130.26 Carica papaya HOM05D005182 ORTHO05D006631 3.5e-41 172.6 106 74.5
FvH4_6g51400 Fragaria vesca HOM05D005182 ORTHO05D006631 7.7e-41 171.4 122 64.8
FAN14G1378 Fragaria x ananassa HOM05D005182 ORTHO05D006631 7.7e-41 171.4 122 64.8
MCO08G118 Micromonas commoda HOM05D005182 ORTHO05D006631 2.2e-40 169.9 133 57.9
Duzib187G0244 Durio zibethinus HOM05D005182 ORTHO05D006631 2.9e-40 169.5 100 74.0
Mapoly0034s0026 Marchantia polymorpha HOM05D005182 ORTHO05D006631 6.5e-40 168.3 116 64.7
Ah.12g060430 Amaranthus hybridus HOM05D005182 ORTHO05D006631 2.5e-39 166.4 171 51.5
AagrBONN_evm.TU.Sc2ySwM_228.389 Anthoceros agrestis HOM05D005182 ORTHO05D006631 1.7e-35 153.7 101 61.4
arahy.Tifrunner.gnm1.ann1.C5A6Z1 Arachis hypogaea HOM05D005182 ORTHO05D006631 7.5e-28 128.3 116 55.2
Prupe.3G289700 Prunus persica HOM05D005182 ORTHO05D006631 2.4e-26 123.2 73 69.9
Cre04.g214100 Chlamydomonas reinhardtii HOM05D005182 ORTHO05D006631 3.1e-26 122.9 146 39.0
EL10Ac6g14578 Beta vulgaris HOM05D002842 ORTHO05D003177 5.4e-26 122.1 72 76.4
Glyma.17G203751 Glycine max HOM05D005182 ORTHO05D006631 7.0e-26 121.7 75 68.0
EL10Ac5g10908 Beta vulgaris HOM05D005182 ORTHO05D006631 1.2e-25 120.9 72 76.4
Cpa.g.sc171.39 Carica papaya HOM05D005182 ORTHO05D006631 1.2e-25 120.9 68 79.4
EL10Ac6g13785 Beta vulgaris HOM05D005182 ORTHO05D006631 3.5e-25 119.4 72 75.0
Hund04415 Selenicereus undatus HOM05D005182 ORTHO05D006631 1.2e-22 110.9 64 76.6
Prupe.3G207400 Prunus persica HOM05D005182 ORTHO05D006631 2.8e-22 109.8 85 63.5
FAN05G5577 Fragaria x ananassa HOM05D005182 ORTHO05D006631 6.1e-22 108.6 87 58.6
QL10p029699 Quercus lobata HOM05D002292 ORTHO05D008330 6.8e-21 105.1 111 49.5
Ah.15g100150 Amaranthus hybridus HOM05D008863 ORTHO05D006631 4.4e-20 102.4 64 68.8
PRCOL_00003784 Prasinoderma coloniale HOM05D005182 ORTHO05D006847 9.8e-20 101.3 97 47.4
QL04p095684 Quercus lobata HOM05D003881 ORTHO05D004343 9.8e-20 101.3 61 72.1
PRCOL_00005828 Prasinoderma coloniale HOM05D005182 ORTHO05D006631 3.0e-16 89.7 80 50.0
RcHm_v2.0_Chr7g0228061 Rosa chinensis HOM05D005182 ORTHO05D006631 5.0e-16 89.0 72 56.9
Cpa.g.c30633.2 Carica papaya HOM05D005182 ORTHO05D006631 1.9e-15 87.0 58 65.5
Zm00001eb085260 Zea mays HOM05D005182 ORTHO05D006631 4.1e-10 69.3 48 68.8
Dinv33459 Davidia involucrata HOM05D005182 ORTHO05D006631 3.0e-08 63.2 33 81.8
RcHm_v2.0_Chr7g0228091 Rosa chinensis HOM05D005182 ORTHO05D344069 1.9e-07 60.5 95 35.8
Glyma.19G005502 Glycine max HOM05D005182 ORTHO05D006631 1.6e-06 57.4 90 41.1


User provided reference genes

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