Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold47G17797 Striga asiatica HOM05D005597 ORTHO05D007304 0.0e+00 1142.1 572 100.0
Migut.H01992 Erythranthe guttata HOM05D005597 ORTHO05D007304 5.1e-286 987.3 570 85.8
MSTRG.12867 Avicennia marina HOM05D005597 ORTHO05D007304 1.5e-285 985.7 572 84.3
Lj8A149T49 Lonicera japonica HOM05D005597 ORTHO05D007304 8.2e-268 926.8 573 79.9
Dinv14987 Davidia involucrata HOM05D005597 ORTHO05D007304 1.1e-267 926.4 569 79.3
Actinidia12571 Actinidia chinensis HOM05D005597 ORTHO05D007304 3.1e-267 924.9 572 78.1
CSS0014594 Camellia sinensis var. sinensis HOM05D005597 ORTHO05D007304 4.0e-267 924.5 569 79.4
CAN.G162.8 Capsicum annuum HOM05D005597 ORTHO05D007304 3.8e-265 917.9 568 77.3
Hma1.2p1_1016F.1_g248150 Hydrangea macrophylla HOM05D005597 ORTHO05D007304 2.5e-264 915.2 568 78.7
Thecc.07G110000 Theobroma cacao HOM05D005597 ORTHO05D007304 5.5e-264 914.1 578 77.3
Rhsim06G0207300 Rhododendron simsii HOM05D005597 ORTHO05D007304 1.2e-263 912.9 572 78.0
arahy.Tifrunner.gnm1.ann1.06PSEJ Arachis hypogaea HOM05D005597 ORTHO05D007304 1.6e-263 912.5 570 77.2
TWI38G1600 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 2.7e-263 911.8 570 77.0
Duzib213G0141 Durio zibethinus HOM05D005597 ORTHO05D007304 3.5e-263 911.4 580 77.1
Nn1g09131 Nelumbo nucifera HOM05D005597 ORTHO05D007304 6.0e-263 910.6 571 77.6
arahy.Tifrunner.gnm1.ann1.Z1JPC4 Arachis hypogaea HOM05D005597 ORTHO05D007304 1.0e-262 909.8 570 76.8
Gorai.013G173400 Gossypium raimondii HOM05D005597 ORTHO05D007304 5.1e-262 907.5 577 77.1
Duzib187G0678 Durio zibethinus HOM05D005597 ORTHO05D007304 8.7e-262 906.7 579 77.2
Manes.03G102000 Manihot esculenta HOM05D005597 ORTHO05D007304 1.1e-261 906.4 572 76.6
TAR624G0947 Trochodendron aralioides HOM05D005597 ORTHO05D007304 1.1e-261 906.4 571 76.9
Gohir.A13G149000 Gossypium hirsutum HOM05D005597 ORTHO05D007304 2.5e-261 905.2 577 76.8
PGSC0003DMG400012388 Solanum tuberosum HOM05D005597 ORTHO05D007304 1.6e-260 902.5 571 77.1
Solyc07g062540.3 Solanum lycopersicum HOM05D005597 ORTHO05D007304 3.7e-260 901.4 571 76.7
Sopen07g030770 Solanum pennellii HOM05D005597 ORTHO05D007304 6.3e-260 900.6 571 76.9
COL.COLO4_17568 Corchorus olitorius HOM05D005597 ORTHO05D007304 8.2e-260 900.2 603 73.8
TWI39G1070 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 1.1e-259 899.8 570 75.3
Atru.chr2.2174 Acer truncatum HOM05D005597 ORTHO05D007304 3.1e-259 898.3 581 76.1
FAN11G3052 Fragaria x ananassa HOM05D005597 ORTHO05D007304 4.1e-259 897.9 571 76.0
FvH4_3g18450 Fragaria vesca HOM05D005597 ORTHO05D007304 9.0e-259 896.7 571 76.0
QL08p026520 Quercus lobata HOM05D005597 ORTHO05D007304 1.2e-258 896.3 577 75.9
TAR626G0744 Trochodendron aralioides HOM05D005597 ORTHO05D007304 1.2e-258 896.3 571 75.7
CsaV3_4G033140 Cucumis sativus L. HOM05D005597 ORTHO05D007304 5.9e-258 894.0 571 75.8
Cfa019573 Carpinus fangiana HOM05D005597 ORTHO05D007304 7.6e-258 893.6 573 76.4
PGR083G2138 Punica granatum HOM05D005597 ORTHO05D007304 2.2e-257 892.1 572 75.3
CiPaw.11G160900 Carya illinoinensis HOM05D005597 ORTHO05D007304 2.9e-257 891.7 574 75.1
ClCG11G017480 Citrullus lanatus HOM05D005597 ORTHO05D007304 3.2e-256 888.3 572 76.2
Lj3g0024865 Lotus japonicus HOM05D005597 ORTHO05D007304 5.5e-256 887.5 570 75.6
unitig_749.g13539 Utricularia gibba HOM05D005597 ORTHO05D007304 5.5e-256 887.5 572 75.9
FAN21G1763 Fragaria x ananassa HOM05D005597 ORTHO05D007304 1.6e-255 885.9 571 75.3
Medtr2g076680 Medicago truncatula HOM05D005597 ORTHO05D007304 6.1e-255 884.0 566 76.7
FAN16G1691 Fragaria x ananassa HOM05D005597 ORTHO05D007304 3.9e-254 881.3 579 74.4
Cc05_g11200 Coffea canephora HOM05D005597 ORTHO05D007304 6.7e-254 880.6 513 81.5
Ca_03990_v3 Cicer arietinum L. HOM05D005597 ORTHO05D007304 8.8e-254 880.2 565 76.5
RcHm_v2.0_Chr5g0031201 Rosa chinensis HOM05D005597 ORTHO05D007304 8.8e-254 880.2 573 74.7
Potri.011G110800 Populus trichocarpa HOM05D005597 ORTHO05D007304 1.9e-253 879.0 571 74.6
Phvul.005G066500 Phaseolus vulgaris HOM05D005597 ORTHO05D007304 5.7e-253 877.5 569 75.2
Lalb_Chr01g0006811 Lupinus albus HOM05D005597 ORTHO05D007304 7.4e-253 877.1 569 75.4
Hund10564 Selenicereus undatus HOM05D005597 ORTHO05D007304 2.2e-252 875.5 560 77.0
Aqoxy1G02067 Aquilegia oxysepala HOM05D005597 ORTHO05D007304 2.8e-252 875.2 573 74.7
AUR62043187 Chenopodium quinoa HOM05D005597 ORTHO05D007304 3.7e-252 874.8 575 75.3
Glyma.12G229300 Glycine max HOM05D005597 ORTHO05D007304 1.8e-251 872.5 530 79.1
MD03G1241900 Malus domestica HOM05D005597 ORTHO05D007304 2.4e-251 872.1 575 74.6
THA.LOC104812323 Tarenaya hassleriana HOM05D005597 ORTHO05D007304 2.4e-251 872.1 574 74.9
Glyma.13G270500 Glycine max HOM05D005597 ORTHO05D007304 3.1e-251 871.7 564 75.5
ECA240G4584 Erigeron canadensis HOM05D000832 ORTHO05D000982 9.1e-251 870.2 571 74.8
TPR.G19385 Trifolium pratense HOM05D005597 ORTHO05D007304 1.5e-250 869.4 572 75.5
Prupe.4G166500 Prunus persica HOM05D005597 ORTHO05D007304 4.5e-250 867.8 571 74.6
MD11G1261800 Malus domestica HOM05D005597 ORTHO05D007304 1.7e-249 865.9 573 74.2
Sed0009860 Sechium edule HOM05D005597 ORTHO05D007304 5.0e-249 864.4 529 77.5
AL1G29070 Arabidopsis lyrata HOM05D005597 ORTHO05D007304 8.5e-249 863.6 569 73.8
HanXRQChr14g0442721 Helianthus annuus HOM05D005597 ORTHO05D007304 1.1e-248 863.2 570 74.0
Eucgr.F01228 Eucalyptus grandis HOM05D005597 ORTHO05D007304 1.4e-248 862.8 573 74.0
C08p17610 Brassica napus HOM05D005597 ORTHO05D007304 3.2e-248 861.7 573 73.6
BcaB02g06666 Brassica carinata HOM05D005597 ORTHO05D007304 5.5e-248 860.9 570 73.3
A08p31230 Brassica napus HOM05D005597 ORTHO05D007304 7.2e-248 860.5 570 74.0
BraA08t35046Z Brassica rapa HOM05D005597 ORTHO05D007304 7.2e-248 860.5 570 74.0
BolC5t30227H Brassica oleracea HOM05D005597 ORTHO05D007304 4.7e-247 857.8 570 73.0
VMungo1080G1355 Vigna mungo HOM05D005597 ORTHO05D007304 4.7e-247 857.8 569 74.0
Sp1g15040 Schrenkiella parvula HOM05D005597 ORTHO05D007304 1.0e-246 856.7 570 73.5
BcaC07g38821 Brassica carinata HOM05D005597 ORTHO05D007304 2.3e-246 855.5 570 73.5
GSVIVG01014208001 Vitis vinifera HOM05D005597 ORTHO05D007304 2.3e-246 855.5 513 79.5
A06p12800 Brassica napus HOM05D005597 ORTHO05D007304 3.9e-246 854.7 569 72.9
Carub.0001s1664 Capsella rubella HOM05D005597 ORTHO05D007304 3.9e-246 854.7 569 73.5
BraA06t24441Z Brassica rapa HOM05D005597 ORTHO05D007304 5.1e-246 854.4 569 72.9
C05p15120 Brassica napus HOM05D005597 ORTHO05D007304 8.8e-246 853.6 570 73.2
vmacro11932 Vaccinium macrocarpon HOM05D005597 ORTHO05D007304 8.8e-246 853.6 593 69.8
AT1G16900 Arabidopsis thaliana HOM05D005597 ORTHO05D007304 1.1e-245 853.2 569 72.6
BolC8t49386H Brassica oleracea HOM05D005597 ORTHO05D007304 1.1e-245 853.2 578 72.5
Thhalv10007218m.g Eutrema salsugineum HOM05D005597 ORTHO05D007304 2.0e-245 852.4 569 72.9
Lsat_1_v5_gn_9_100260 Lactuca sativa HOM05D005597 ORTHO05D007304 2.6e-245 852.0 571 72.9
SalBow7G0883 Salvia bowleyana HOM05D005597 ORTHO05D007304 2.6e-245 852.0 498 84.3
CDE02G4663 Ceratophyllum demersum HOM05D005597 ORTHO05D007304 5.7e-245 850.9 570 73.9
BcaC05g25546 Brassica carinata HOM05D005597 ORTHO05D007304 7.4e-245 850.5 563 73.4
EL10Ac4g08334 Beta vulgaris HOM05D005597 ORTHO05D007304 1.1e-243 846.7 591 71.2
MBI07_g03181_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D007304 1.1e-243 846.7 559 73.2
CARHR017370 Cardamine hirsuta HOM05D005597 ORTHO05D007304 1.8e-243 845.9 572 72.4
PSO675G3712 Papaver somniferum HOM05D005597 ORTHO05D007304 9.1e-243 843.6 578 71.3
BcaB03g13027 Brassica carinata HOM05D005597 ORTHO05D007304 2.0e-242 842.4 545 74.7
Sabra11G0098300 Salix brachista HOM05D005597 ORTHO05D007304 3.4e-242 841.6 622 68.3
Ciclev10019496m.g Citrus clementina HOM05D005597 ORTHO05D007304 1.0e-241 840.1 575 72.0
PSO500G0209 Papaver somniferum HOM05D005597 ORTHO05D007304 2.2e-241 839.0 578 70.6
CSS0003229 Camellia sinensis var. sinensis HOM05D005597 ORTHO05D007304 2.7e-239 832.0 567 72.7
FAN25G0069 Fragaria x ananassa HOM05D005597 ORTHO05D007304 2.0e-237 825.9 576 70.7
ATR0602G238 Amborella trichopoda HOM05D005597 ORTHO05D007304 3.7e-236 821.6 573 70.9
CANSAT35G0471 Cannabis sativa HOM05D005597 ORTHO05D007304 3.1e-235 818.5 532 76.3
Os01g0209000 Oryza sativa ssp. japonica HOM05D005597 ORTHO05D007304 2.9e-233 812.0 529 73.5
Zm00001eb120330 Zea mays HOM05D005597 ORTHO05D007304 4.7e-231 804.7 566 70.1
Aa31LG7G1320 Aethionema arabicum HOM05D005597 ORTHO05D007304 3.7e-228 795.0 561 71.7
Haze_09335 Corylus avellana HOM05D005597 ORTHO05D007304 4.0e-222 775.0 480 78.3
HPP92_004052 Vanilla planifolia HOM05D005597 ORTHO05D007304 1.4e-214 750.0 619 61.4
AUR62019570 Chenopodium quinoa HOM05D005597 ORTHO05D007304 4.0e-214 748.4 573 67.2
Duzib213G0888 Durio zibethinus HOM05D005597 ORTHO05D007304 1.0e-209 733.8 448 79.9
Peaxi162Scf00069g02235 Petunia axillaris HOM05D005597 ORTHO05D007304 1.6e-202 709.9 435 77.9
MELO3C025637.2 Cucumis melo HOM05D005597 ORTHO05D007304 1.4e-198 696.8 427 79.2
DCAR_013152 Daucus carota HOM05D005597 ORTHO05D007304 4.9e-196 688.3 439 76.5
Hma1.2p1_1016F.1_g248140 Hydrangea macrophylla HOM05D005597 ORTHO05D007304 5.1e-193 678.3 434 78.3
Gohir.D13G153500 Gossypium hirsutum HOM05D005597 ORTHO05D007304 9.5e-192 674.1 408 79.4
Sc03g0010510 Simmondsia chinensis HOM05D005597 ORTHO05D007304 1.1e-182 644.0 434 74.0
Psat5g238320 Pisum sativum HOM05D005597 ORTHO05D007304 2.1e-178 629.8 430 75.6
Mapoly0059s0091 Marchantia polymorpha HOM05D005597 ORTHO05D007304 6.2e-175 618.2 576 54.3
Ah.06g185290 Amaranthus hybridus HOM05D005597 ORTHO05D007304 5.8e-165 585.1 440 69.3
Dinv18359 Davidia involucrata HOM05D005597 ORTHO05D007304 4.6e-154 548.9 372 76.3
Pp3c6_16240 Physcomitrium patens HOM05D005597 ORTHO05D007304 6.9e-150 535.0 548 51.8
AagrBONN_evm.TU.Sc2ySwM_228.833 Anthoceros agrestis HOM05D005597 ORTHO05D007304 2.6e-149 533.1 543 52.9
SMO143G0166 Selaginella moellendorffii HOM05D005597 ORTHO05D007304 3.2e-147 526.2 551 51.7
SHI21382 Sapria himalayana HOM05D005597 ORTHO05D007304 1.4e-118 431.0 388 59.5
CBR_g38668 Chara braunii HOM05D005597 ORTHO05D007304 1.8e-118 430.6 578 40.1
Oeu059263.1 Olea europaea HOM05D005597 ORTHO05D007304 3.8e-100 369.8 388 55.9
Nitab4.5_0001145g0050 Nicotiana tabacum HOM05D005597 ORTHO05D007304 1.9e-99 367.5 278 70.1
SHI21385 Sapria himalayana HOM05D000105 ORTHO05D000023 2.0e-93 347.4 222 72.1
Nitab4.5_0000246g0240 Nicotiana tabacum HOM05D005597 ORTHO05D007304 1.7e-92 344.4 585 41.0
Cpa.g.sc97.103 Carica papaya HOM05D005597 ORTHO05D007304 9.8e-88 328.6 212 77.8
SEGI_23731 Sequoiadendron giganteum HOM05D005597 ORTHO05D007304 1.9e-78 297.7 223 60.1
MCO07G083 Micromonas commoda HOM05D005597 ORTHO05D007304 8.1e-66 255.8 604 32.6
PRCOL_00005636 Prasinoderma coloniale HOM05D005597 ORTHO05D007304 1.1e-65 255.4 534 34.8
Cfa025275 Carpinus fangiana HOM05D005597 ORTHO05D028637 9.0e-57 225.7 510 34.3
Actinidia09803 Actinidia chinensis HOM05D005597 ORTHO05D007304 4.2e-54 216.9 126 77.0
Gohir.A07G160600 Gossypium hirsutum HOM05D005597 ORTHO05D007304 3.9e-52 210.3 148 73.6
Gohir.A04G098250 Gossypium hirsutum HOM05D005597 ORTHO05D007304 3.3e-51 207.2 151 70.2
Gohir.A03G066250 Gossypium hirsutum HOM05D005597 ORTHO05D007304 1.8e-49 201.4 139 74.8
Lsat_1_v5_gn_9_21740 Lactuca sativa HOM05D005597 ORTHO05D007174 6.9e-41 172.9 182 59.3
COL.COLO4_17572 Corchorus olitorius HOM05D005597 ORTHO05D007304 4.5e-40 170.2 106 78.3
Atru.chr2.2170 Acer truncatum HOM05D005597 ORTHO05D007304 1.1e-38 165.6 95 74.7
Actinidia24363 Actinidia chinensis HOM05D005597 ORTHO05D007304 2.4e-25 121.3 89 68.5
Nn1g04407 Nelumbo nucifera HOM05D005597 ORTHO05D007304 1.7e-18 98.6 73 60.3
MBI01_g45400_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D010488 5.0e-15 87.0 50 74.0
MBI01_g45631_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D010488 6.5e-15 86.7 60 61.7
Potri.001G392050 Populus trichocarpa HOM05D005597 ORTHO05D007304 1.4e-14 85.5 49 77.6
Lsat_1_v5_gn_3_114580 Lactuca sativa HOM05D002100 ORTHO05D002310 7.2e-14 83.2 59 78.0


User provided reference genes

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