Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold47G17780 Striga asiatica HOM05D064676 ORTHO05D002721 3.1e-193 678.3 350 100.0
SGA_v2.0_scaffold21G09557 Striga asiatica HOM05D000240 ORTHO05D002721 4.8e-21 106.3 104 65.4
MSTRG.26499 Avicennia marina HOM05D000240 ORTHO05D002721 8.0e-16 89.0 143 47.6
Dinv25507 Davidia involucrata HOM05D000240 ORTHO05D002721 2.3e-15 87.4 109 49.5
Haze_26068 Corylus avellana HOM05D000240 ORTHO05D002721 5.7e-14 82.8 79 65.8
TWI63G0011 Tripterygium wilfordii HOM05D000240 ORTHO05D002721 1.7e-13 81.3 70 70.0
CiPaw.03G200500 Carya illinoinensis HOM05D000240 ORTHO05D002721 2.8e-13 80.5 70 70.0
Cfa002938 Carpinus fangiana HOM05D000240 ORTHO05D002721 6.3e-13 79.3 79 63.3
CAN.G54.12 Capsicum annuum HOM05D000240 ORTHO05D002721 1.1e-12 78.6 68 69.1
SalBow5G3088 Salvia bowleyana HOM05D000240 ORTHO05D002721 1.1e-12 78.6 102 54.9
SalBow5G3607 Salvia bowleyana HOM05D000240 ORTHO05D002721 1.1e-12 78.6 102 54.9
Cpa.g.sc82.64 Carica papaya HOM05D000240 ORTHO05D002721 2.4e-12 77.4 84 60.7
PGSC0003DMG400013573 Solanum tuberosum HOM05D000240 ORTHO05D002721 4.1e-12 76.6 68 66.2
Manes.03G044500 Manihot esculenta HOM05D000240 ORTHO05D002721 7.0e-12 75.9 70 62.9
Nitab4.5_0003139g0100 Nicotiana tabacum HOM05D000240 ORTHO05D002721 7.0e-12 75.9 68 66.2
Hund08900 Selenicereus undatus HOM05D000240 ORTHO05D002721 7.0e-12 75.9 70 67.1
GSVIVG01015015001 Vitis vinifera HOM05D000240 ORTHO05D002721 7.0e-12 75.9 70 62.9
Atru.chr7.1766 Acer truncatum HOM05D000240 ORTHO05D002721 1.2e-11 75.1 70 62.9
Ah.09g228930 Amaranthus hybridus HOM05D000240 ORTHO05D002721 1.2e-11 75.1 71 63.4
Lj4C920T7 Lonicera japonica HOM05D000240 ORTHO05D002721 1.2e-11 75.1 64 70.3
unitig_8.g3242 Utricularia gibba HOM05D000240 ORTHO05D002721 1.6e-11 74.7 117 46.2
AUR62025320 Chenopodium quinoa HOM05D000240 ORTHO05D002721 2.0e-11 74.3 80 56.2
Nitab4.5_0000170g0040 Nicotiana tabacum HOM05D000240 ORTHO05D002721 2.0e-11 74.3 68 64.7
Sc18g0002840 Simmondsia chinensis HOM05D000240 ORTHO05D002721 2.0e-11 74.3 70 64.3
Solyc07g042560.4 Solanum lycopersicum HOM05D000240 ORTHO05D002721 2.0e-11 74.3 68 66.2
Sopen07g022250 Solanum pennellii HOM05D000240 ORTHO05D002721 2.0e-11 74.3 68 66.2
Thecc.09G070400 Theobroma cacao HOM05D000240 ORTHO05D002721 4.5e-11 73.2 70 64.3
AUR62028320 Chenopodium quinoa HOM05D000240 ORTHO05D002721 1.0e-10 72.0 80 58.8
Gohir.A13G189100 Gossypium hirsutum HOM05D000240 ORTHO05D002721 1.0e-10 72.0 87 51.7
DCAR_028529 Daucus carota HOM05D000240 ORTHO05D002721 1.3e-10 71.6 74 60.8
Peaxi162Scf00474g00522 Petunia axillaris HOM05D000240 ORTHO05D002721 1.3e-10 71.6 68 64.7
COL.COLO4_21209 Corchorus olitorius HOM05D000240 ORTHO05D002721 1.7e-10 71.2 68 64.7
Gohir.D13G196100 Gossypium hirsutum HOM05D000240 ORTHO05D002721 2.3e-10 70.9 87 50.6
Gorai.013G222300 Gossypium raimondii HOM05D000240 ORTHO05D002721 2.3e-10 70.9 87 50.6
CANSAT56G3375 Cannabis sativa HOM05D000240 ORTHO05D002721 3.9e-10 70.1 80 56.2
Cc06_g12690 Coffea canephora HOM05D000240 ORTHO05D002721 3.9e-10 70.1 81 59.3
ECA240G2954 Erigeron canadensis HOM05D000240 ORTHO05D002721 3.9e-10 70.1 71 62.0
Potri.006G136600 Populus trichocarpa HOM05D000240 ORTHO05D002721 3.9e-10 70.1 70 64.3
SGA_v2.0_scaffold47G17776 Striga asiatica HOM05D064676 ORTHO05D405598 5.0e-10 69.7 89 47.2
arahy.Tifrunner.gnm1.ann1.Q5X08K Arachis hypogaea HOM05D000240 ORTHO05D002721 8.6e-10 68.9 94 47.9
Ciclev10007377m.g Citrus clementina HOM05D000240 ORTHO05D002721 8.6e-10 68.9 66 68.2
Migut.L01595 Erythranthe guttata HOM05D000240 ORTHO05D002721 8.6e-10 68.9 86 55.8
Sabra06G0106800 Salix brachista HOM05D000240 ORTHO05D002721 8.6e-10 68.9 70 61.4
Lsat_1_v5_gn_7_35460 Lactuca sativa HOM05D000240 ORTHO05D002721 1.1e-09 68.6 73 58.9
THA.LOC104810981 Tarenaya hassleriana HOM05D000240 ORTHO05D002721 1.1e-09 68.6 78 56.4
TAR383G0768 Trochodendron aralioides HOM05D000240 ORTHO05D002721 1.1e-09 68.6 71 64.8
Nn8g38535 Nelumbo nucifera HOM05D000240 ORTHO05D002721 1.5e-09 68.2 68 60.3
arahy.Tifrunner.gnm1.ann1.BE35K4 Arachis hypogaea HOM05D000240 ORTHO05D002721 1.9e-09 67.8 64 60.9
QL11p002948 Quercus lobata HOM05D000240 ORTHO05D002721 1.9e-09 67.8 73 60.3
Actinidia39618 Actinidia chinensis HOM05D000240 ORTHO05D002721 3.3e-09 67.0 93 51.6
Duzib168G0831 Durio zibethinus HOM05D000240 ORTHO05D002721 3.3e-09 67.0 73 56.2
Lj4g0024891 Lotus japonicus HOM05D000240 ORTHO05D002721 3.3e-09 67.0 68 61.8
FvH4_1g09380 Fragaria vesca HOM05D000240 ORTHO05D002721 4.3e-09 66.6 59 69.5
FAN19G2505 Fragaria x ananassa HOM05D000240 ORTHO05D002721 4.3e-09 66.6 59 69.5
FAN26G1305 Fragaria x ananassa HOM05D000240 ORTHO05D002721 4.3e-09 66.6 59 69.5
FAN26G3278 Fragaria x ananassa HOM05D000240 ORTHO05D002721 4.3e-09 66.6 59 69.5
BcaC01g02203 Brassica carinata HOM05D000240 ORTHO05D002721 1.2e-08 65.1 96 46.9
C03p67900 Brassica napus HOM05D000240 ORTHO05D002721 1.2e-08 65.1 96 46.9
BolSC21t60223H Brassica oleracea HOM05D000240 ORTHO05D002721 1.2e-08 65.1 96 46.9
FAN28G1500 Fragaria x ananassa HOM05D000240 ORTHO05D002721 1.2e-08 65.1 59 67.8
FAN28G2664 Fragaria x ananassa HOM05D000240 ORTHO05D002721 1.2e-08 65.1 59 67.8
Eucgr.C03198 Eucalyptus grandis HOM05D000240 ORTHO05D002721 1.6e-08 64.7 64 62.5
FAN23G2089 Fragaria x ananassa HOM05D000240 ORTHO05D002721 1.6e-08 64.7 59 67.8
HanXRQChr01g0007541 Helianthus annuus HOM05D000240 ORTHO05D002721 1.6e-08 64.7 95 50.5
RcHm_v2.0_Chr2g0095931 Rosa chinensis HOM05D000240 ORTHO05D002721 1.6e-08 64.7 59 66.1
Aa31LG4G12990 Aethionema arabicum HOM05D000240 ORTHO05D002721 2.8e-08 63.9 92 48.9
A06p26610 Brassica napus HOM05D000240 ORTHO05D002721 2.8e-08 63.9 96 45.8
BraA06t25589Z Brassica rapa HOM05D000240 ORTHO05D002721 2.8e-08 63.9 96 45.8
CSS0050230 Camellia sinensis var. sinensis HOM05D000240 ORTHO05D002721 3.6e-08 63.5 93 48.4
MD15G1223600 Malus domestica HOM05D000240 ORTHO05D002721 4.7e-08 63.2 64 60.9
MD02G1101100 Malus domestica HOM05D000240 ORTHO05D002721 6.1e-08 62.8 73 60.3
Thhalv10002392m.g Eutrema salsugineum HOM05D000240 ORTHO05D002721 8.0e-08 62.4 135 34.1
Lalb_Chr07g0181401 Lupinus albus HOM05D000240 ORTHO05D002721 8.0e-08 62.4 68 57.4
Psat4g019760 Pisum sativum HOM05D000240 ORTHO05D002721 1.0e-07 62.0 64 59.4
Sp5g18550 Schrenkiella parvula HOM05D000240 ORTHO05D002721 1.0e-07 62.0 67 55.2
TPR.G12717 Trifolium pratense HOM05D000240 ORTHO05D002721 1.4e-07 61.6 97 45.4
VMungo1215G0352 Vigna mungo HOM05D000240 ORTHO05D002721 2.3e-07 60.8 68 55.9
CARHR184560 Cardamine hirsuta HOM05D000240 ORTHO05D002721 3.1e-07 60.5 65 53.8
Glyma.13G114200 Glycine max HOM05D000240 ORTHO05D002721 4.0e-07 60.1 68 55.9
vmacro17079 Vaccinium macrocarpon HOM05D000240 ORTHO05D002721 8.9e-07 58.9 79 51.9
Medtr4g124650 Medicago truncatula HOM05D000240 ORTHO05D002721 1.2e-06 58.5 76 48.7
Prupe.7G192200 Prunus persica HOM05D000240 ORTHO05D002721 1.2e-06 58.5 65 58.5
TAR622G1064 Trochodendron aralioides HOM05D000240 ORTHO05D002721 1.5e-06 58.2 74 50.0
Phvul.003G127400 Phaseolus vulgaris HOM05D000240 ORTHO05D002721 2.0e-06 57.8 74 50.0
Rhsim05G0002200 Rhododendron simsii HOM05D000240 ORTHO05D002721 5.8e-06 56.2 76 51.3


User provided reference genes

Program Settings