Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold47G17761 Striga asiatica HOM05D005306 ORTHO05D006158 1.5e-223 779.2 399 100.0
SGA_v2.0_scaffold34G13602 Striga asiatica HOM05D005306 ORTHO05D006158 1.1e-98 364.4 408 57.1
Oeu032161.1 Olea europaea HOM05D005306 ORTHO05D006158 1.9e-58 230.7 400 41.0
Oeu032163.1 Olea europaea HOM05D005306 ORTHO05D006158 1.9e-58 230.7 400 41.0
Migut.H02371 Erythranthe guttata HOM05D005306 ORTHO05D006158 6.3e-57 225.7 426 39.7
MSTRG.2558 Avicennia marina HOM05D005306 ORTHO05D006158 9.0e-56 221.9 511 37.2
MSTRG.23333 Avicennia marina HOM05D005306 ORTHO05D006158 7.6e-55 218.8 496 36.7
SalBow3G4455 Salvia bowleyana HOM05D005306 ORTHO05D006158 3.8e-54 216.5 459 37.3
Cc07_g15400 Coffea canephora HOM05D005306 ORTHO05D006158 1.7e-41 174.5 419 33.9
Sopen04g024710 Solanum pennellii HOM05D005306 ORTHO05D006158 7.2e-37 159.1 409 32.5
PGSC0003DMG400020626 Solanum tuberosum HOM05D005306 ORTHO05D006158 1.2e-36 158.3 412 33.3
Lj4A885T20 Lonicera japonica HOM05D005306 ORTHO05D006158 2.7e-36 157.1 427 32.8
Actinidia36600 Actinidia chinensis HOM05D005306 ORTHO05D006158 7.9e-36 155.6 439 31.7
Solyc04g054900.3 Solanum lycopersicum HOM05D005306 ORTHO05D006158 6.7e-35 152.5 409 32.0
Dinv21926 Davidia involucrata HOM05D005306 ORTHO05D006158 3.7e-33 146.7 411 31.9
CAN.G113.1 Capsicum annuum HOM05D005306 ORTHO05D006158 1.8e-32 144.4 410 32.7
Peaxi162Scf00422g00025 Petunia axillaris HOM05D005306 ORTHO05D006158 7.0e-32 142.5 407 31.4
Dinv16302 Davidia involucrata HOM05D005306 ORTHO05D006158 4.5e-31 139.8 420 31.4
CSS0034809 Camellia sinensis var. sinensis HOM05D005306 ORTHO05D006158 1.0e-30 138.7 407 30.7
QL06p049976 Quercus lobata HOM05D005306 ORTHO05D006158 4.2e-29 133.3 230 38.3
Nitab4.5_0004120g0030 Nicotiana tabacum HOM05D005306 ORTHO05D006158 2.1e-28 131.0 400 32.0
TAR625G0717 Trochodendron aralioides HOM05D005306 ORTHO05D006158 6.1e-28 129.4 172 43.0
Cpa.g.sc20.237 Carica papaya HOM05D005306 ORTHO05D006158 5.2e-27 126.3 404 31.4
Ciclev10025982m.g Citrus clementina HOM05D005306 ORTHO05D006158 2.0e-26 124.4 403 29.0
Duzib147G0288 Durio zibethinus HOM05D005306 ORTHO05D006158 2.0e-26 124.4 148 45.9
Manes.12G136900 Manihot esculenta HOM05D005306 ORTHO05D006158 2.6e-26 124.0 159 44.7
Potri.007G090500 Populus trichocarpa HOM05D005306 ORTHO05D006158 2.6e-26 124.0 387 32.0
DCAR_014236 Daucus carota HOM05D005306 ORTHO05D006158 3.3e-26 123.6 380 28.9
Nitab4.5_0000104g0330 Nicotiana tabacum HOM05D005306 ORTHO05D006158 5.7e-26 122.9 401 31.7
TWI53G1353 Tripterygium wilfordii HOM05D005306 ORTHO05D006158 9.7e-26 122.1 391 29.7
vmacro12947 Vaccinium macrocarpon HOM05D005306 ORTHO05D006158 9.7e-26 122.1 408 27.9
Thecc.01G104400 Theobroma cacao HOM05D005306 ORTHO05D006158 2.2e-25 120.9 169 44.4
AUR62002025 Chenopodium quinoa HOM05D005306 ORTHO05D006158 2.8e-25 120.6 166 42.2
Lsat_1_v5_gn_4_141700 Lactuca sativa HOM05D005306 ORTHO05D006158 2.8e-25 120.6 388 31.7
Hund13638 Selenicereus undatus HOM05D005306 ORTHO05D006158 2.8e-25 120.6 194 36.6
CiPaw.04G097600 Carya illinoinensis HOM05D005306 ORTHO05D006158 3.7e-25 120.2 412 29.9
ECA232G0837 Erigeron canadensis HOM05D005306 ORTHO05D006158 3.7e-25 120.2 174 44.8
TWI77G0207 Tripterygium wilfordii HOM05D005306 ORTHO05D006158 3.7e-25 120.2 416 27.4
GSVIVG01004251001 Vitis vinifera HOM05D005306 ORTHO05D006158 6.3e-25 119.4 273 34.4
CANSAT01G2249 Cannabis sativa HOM05D005306 ORTHO05D006158 1.1e-24 118.6 123 52.0
Cfa002685 Carpinus fangiana HOM05D005306 ORTHO05D006158 1.1e-24 118.6 176 39.8
Gohir.D12G096600 Gossypium hirsutum HOM05D005306 ORTHO05D006158 1.8e-24 117.9 225 36.9
Gorai.008G104700 Gossypium raimondii HOM05D005306 ORTHO05D006158 1.8e-24 117.9 225 36.9
Atru.chr4.126 Acer truncatum HOM05D005306 ORTHO05D006158 2.4e-24 117.5 413 28.6
Sabra07G0074200 Salix brachista HOM05D005306 ORTHO05D006158 3.1e-24 117.1 395 30.6
QL04p017893 Quercus lobata HOM05D005306 ORTHO05D006158 4.1e-24 116.7 417 30.7
THA.LOC104818490 Tarenaya hassleriana HOM05D005306 ORTHO05D006158 4.1e-24 116.7 224 36.6
Thhalv10004547m.g Eutrema salsugineum HOM05D005306 ORTHO05D006158 9.1e-24 115.5 142 43.0
CiPaw.03G140300 Carya illinoinensis HOM05D005306 ORTHO05D006158 1.6e-23 114.8 331 32.0
Psat7g054080 Pisum sativum HOM05D005306 ORTHO05D006158 1.6e-23 114.8 195 41.0
PGR102G1853 Punica granatum HOM05D005306 ORTHO05D006158 2.0e-23 114.4 149 40.3
CsaV3_6G045590 Cucumis sativus L. HOM05D005306 ORTHO05D006158 2.7e-23 114.0 153 43.1
Gohir.A12G079125 Gossypium hirsutum HOM05D005306 ORTHO05D006158 3.5e-23 113.6 209 39.2
MELO3C007770.2 Cucumis melo HOM05D005306 ORTHO05D006158 7.7e-23 112.5 196 37.2
TPR.G2173 Trifolium pratense HOM05D005306 ORTHO05D006158 7.7e-23 112.5 128 49.2
AUR62003775 Chenopodium quinoa HOM05D005306 ORTHO05D006158 1.0e-22 112.1 168 41.1
Medtr8g090365 Medicago truncatula HOM05D005306 ORTHO05D006158 1.0e-22 112.1 220 38.2
THA.LOC104819305 Tarenaya hassleriana HOM05D005306 ORTHO05D006158 1.0e-22 112.1 142 43.7
Haze_24956 Corylus avellana HOM05D005306 ORTHO05D006158 1.3e-22 111.7 436 28.2
PSO210G6319 Papaver somniferum HOM05D005306 ORTHO05D006158 1.7e-22 111.3 190 38.4
RcHm_v2.0_Chr2g0115081 Rosa chinensis HOM05D005306 ORTHO05D006158 2.9e-22 110.5 421 26.8
TAR381G0610 Trochodendron aralioides HOM05D005306 ORTHO05D006158 6.5e-22 109.4 232 34.5
unitig_27.g25362 Utricularia gibba HOM05D033148 ORTHO05D006158 6.5e-22 109.4 155 43.9
HanXRQChr15g0484181 Helianthus annuus HOM05D005306 ORTHO05D006158 8.5e-22 109.0 397 29.2
COL.COLO4_09939 Corchorus olitorius HOM05D005306 ORTHO05D006158 1.1e-21 108.6 292 32.2
Aa31LG1G16850 Aethionema arabicum HOM05D005306 ORTHO05D006158 1.5e-21 108.2 271 31.4
BraA06t26127Z Brassica rapa HOM05D005306 ORTHO05D006158 1.5e-21 108.2 215 33.0
Sp6g33290 Schrenkiella parvula HOM05D005306 ORTHO05D006158 1.5e-21 108.2 189 38.1
arahy.Tifrunner.gnm1.ann1.U0X1YR Arachis hypogaea HOM05D005306 ORTHO05D006158 2.5e-21 107.5 120 47.5
Thhalv10014214m.g Eutrema salsugineum HOM05D005306 ORTHO05D006158 2.5e-21 107.5 239 36.0
MD01G1027000 Malus domestica HOM05D005306 ORTHO05D006158 2.5e-21 107.5 412 29.1
arahy.Tifrunner.gnm1.ann1.H9PZRL Arachis hypogaea HOM05D005306 ORTHO05D006158 3.2e-21 107.1 120 47.5
A06p31940 Brassica napus HOM05D005306 ORTHO05D006158 3.2e-21 107.1 241 31.5
Prupe.6G182000 Prunus persica HOM05D005306 ORTHO05D006158 3.2e-21 107.1 430 28.8
VMungo0251G2777 Vigna mungo HOM05D005306 ORTHO05D006158 3.2e-21 107.1 120 45.8
Ah.02g122180 Amaranthus hybridus HOM05D005306 ORTHO05D006158 5.5e-21 106.3 335 31.9
ClCG01G018910 Citrullus lanatus HOM05D005306 ORTHO05D006158 5.5e-21 106.3 189 38.1
Gohir.A11G052900 Gossypium hirsutum HOM05D005306 ORTHO05D006158 5.5e-21 106.3 194 36.1
BcaB02g09863 Brassica carinata HOM05D005306 ORTHO05D006158 7.2e-21 105.9 194 36.1
BcaC01g02741 Brassica carinata HOM05D005306 ORTHO05D006158 7.2e-21 105.9 215 32.6
C03p61010 Brassica napus HOM05D005306 ORTHO05D006158 7.2e-21 105.9 215 32.6
BolC3t18363H Brassica oleracea HOM05D005306 ORTHO05D006158 7.2e-21 105.9 215 32.6
Sp2g28200 Schrenkiella parvula HOM05D005306 ORTHO05D006158 7.2e-21 105.9 250 32.4
Sed0001570 Sechium edule HOM05D005306 ORTHO05D006158 9.4e-21 105.5 120 47.5
FvH4_1g21240 Fragaria vesca HOM05D005306 ORTHO05D006158 1.6e-20 104.8 307 31.9
FAN23G1139 Fragaria x ananassa HOM05D005306 ORTHO05D006158 1.6e-20 104.8 422 27.3
Gorai.007G061500 Gossypium raimondii HOM05D005306 ORTHO05D006158 1.6e-20 104.8 228 36.0
FAN28G0785 Fragaria x ananassa HOM05D005306 ORTHO05D006158 2.1e-20 104.4 246 32.9
Potri.005G077400 Populus trichocarpa HOM05D005306 ORTHO05D006158 2.1e-20 104.4 144 42.4
Phvul.002G254400 Phaseolus vulgaris HOM05D005306 ORTHO05D006158 2.7e-20 104.0 120 45.8
AL8G42620 Arabidopsis lyrata HOM05D005306 ORTHO05D006158 3.6e-20 103.6 216 34.7
MD15G1327000 Malus domestica HOM05D005306 ORTHO05D006158 6.1e-20 102.8 142 41.5
A03p04410 Brassica napus HOM05D005306 ORTHO05D006158 1.0e-19 102.1 114 49.1
BraA03t09786Z Brassica rapa HOM05D005306 ORTHO05D006158 1.0e-19 102.1 114 49.1
Ca_17725_v3 Cicer arietinum L. HOM05D005306 ORTHO05D006158 1.4e-19 101.7 192 34.9
AT5G10110 Arabidopsis thaliana HOM05D005306 ORTHO05D006158 5.2e-19 99.8 163 37.4
FAN26G1901 Fragaria x ananassa HOM05D005306 ORTHO05D006158 6.8e-19 99.4 411 27.7
BcaC04g23269 Brassica carinata HOM05D005306 ORTHO05D006158 1.2e-18 98.6 215 37.2
AT5G65120 Arabidopsis thaliana HOM05D005306 ORTHO05D006158 1.5e-18 98.2 109 47.7
Lsat_1_v5_gn_5_43440 Lactuca sativa HOM05D005306 ORTHO05D006158 1.5e-18 98.2 370 27.8
BcaB04g20004 Brassica carinata HOM05D005306 ORTHO05D006158 2.0e-18 97.8 125 46.4
Carub.0008s2596 Capsella rubella HOM05D005306 ORTHO05D006158 2.6e-18 97.4 235 34.5
CARHR203180 Cardamine hirsuta HOM05D005306 ORTHO05D006158 4.4e-18 96.7 109 46.8
Eucgr.H04811 Eucalyptus grandis HOM05D005306 ORTHO05D006158 9.8e-18 95.5 396 27.0
Nn1g05302 Nelumbo nucifera HOM05D005306 ORTHO05D006158 9.8e-18 95.5 400 26.2
C03p04880 Brassica napus HOM05D005306 ORTHO05D006158 1.3e-17 95.1 218 33.9
BolC3t13020H Brassica oleracea HOM05D005306 ORTHO05D006158 1.3e-17 95.1 218 33.9
Lalb_Chr13g0296051 Lupinus albus HOM05D005306 ORTHO05D006158 1.3e-17 95.1 120 42.5
Nn5g29063 Nelumbo nucifera HOM05D005306 ORTHO05D006158 1.3e-17 95.1 118 44.1
C09p10370 Brassica napus HOM05D005306 ORTHO05D006158 1.7e-17 94.7 214 35.0
BolC9t53937H Brassica oleracea HOM05D005306 ORTHO05D006158 1.7e-17 94.7 214 35.0
BraA09t36544Z Brassica rapa HOM05D005306 ORTHO05D006158 1.7e-17 94.7 115 46.1
Lalb_Chr07g0185101 Lupinus albus HOM05D005306 ORTHO05D006158 1.7e-17 94.7 120 41.7
MBI05_g34472_MAGBIO Magnolia biondii HOM05D005306 ORTHO05D006158 3.7e-17 93.6 417 27.6
CARHR279030 Cardamine hirsuta HOM05D005306 ORTHO05D006158 6.3e-17 92.8 233 33.5
FAN19G0499 Fragaria x ananassa HOM05D005306 ORTHO05D006158 6.3e-17 92.8 294 31.3
AL6G20570 Arabidopsis lyrata HOM05D005306 ORTHO05D006158 1.4e-16 91.7 175 33.1
Carub.0006s0857 Capsella rubella HOM05D005306 ORTHO05D006158 2.4e-16 90.9 253 32.0
Os02g0752300 Oryza sativa ssp. japonica HOM05D005306 ORTHO05D006158 2.4e-16 90.9 116 42.2
Aqoxy6G00585 Aquilegia oxysepala HOM05D005306 ORTHO05D006158 3.1e-16 90.5 343 28.0
Gohir.D11G056300 Gossypium hirsutum HOM05D005306 ORTHO05D006158 7.0e-16 89.4 200 36.0
Lj4g0005197 Lotus japonicus HOM05D005306 ORTHO05D006158 2.7e-15 87.4 161 36.0
Zm00001eb194230 Zea mays HOM05D005306 ORTHO05D006158 8.5e-14 82.4 118 39.0
CDE10G0726 Ceratophyllum demersum HOM05D005306 ORTHO05D006158 1.1e-13 82.0 98 42.9
Sed0017418 Sechium edule HOM05D005306 ORTHO05D006158 1.1e-13 82.0 121 43.8
EL10Ac6g15084 Beta vulgaris HOM05D005306 ORTHO05D006158 7.2e-13 79.3 187 32.6
A09p08930 Brassica napus HOM05D005306 ORTHO05D006158 1.6e-12 78.2 221 31.7
ATR0564G355 Amborella trichopoda HOM05D005306 ORTHO05D006158 5.2e-11 73.2 120 37.5
TWI74G0266 Tripterygium wilfordii HOM05D005306 ORTHO05D006158 1.5e-10 71.6 121 40.5
THA.LOC104801720 Tarenaya hassleriana HOM05D005306 ORTHO05D006158 1.3e-09 68.6 151 34.4
PSO447G0179 Papaver somniferum HOM05D005306 ORTHO05D006158 3.7e-09 67.0 106 39.6
HPP92_004303 Vanilla planifolia HOM05D005306 ORTHO05D006158 2.4e-08 64.3 105 36.2
Aa31LG3G17030 Aethionema arabicum HOM05D005306 ORTHO05D006158 4.1e-08 63.5 107 36.4
Glyma.08G137700 Glycine max HOM05D005306 ORTHO05D006158 5.4e-08 63.2 218 28.0
Sc16g0005560 Simmondsia chinensis HOM05D005306 ORTHO05D006158 1.2e-07 62.0 85 35.3
Hund16271 Selenicereus undatus HOM05D005306 ORTHO05D006158 5.9e-07 59.7 79 46.8
CDE10G0861 Ceratophyllum demersum HOM05D005306 ORTHO05D006158 2.3e-06 57.8 119 30.3
Ah.03g142470 Amaranthus hybridus HOM05D005306 ORTHO05D006158 3.8e-06 57.0 89 37.1
unitig_699.g19586 Utricularia gibba HOM05D033148 ORTHO05D006158 5.0e-06 56.6 75 45.3
SEGI_16914 Sequoiadendron giganteum HOM05D003400 ORTHO05D003687 6.6e-06 56.2 157 31.2


User provided reference genes

Program Settings