Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold47G17711 Striga asiatica HOM05D007384 ORTHO05D008511 6.3e-66 254.2 152 100.0
MSTRG.23314 Avicennia marina HOM05D007384 ORTHO05D008511 6.8e-28 127.9 152 51.3
Oeu056489.1 Olea europaea HOM05D007384 ORTHO05D008511 3.7e-26 122.1 154 48.1
Oeu056487.1 Olea europaea HOM05D007384 ORTHO05D008511 7.0e-25 117.9 152 46.7
SalBow5G4202 Salvia bowleyana HOM05D007384 ORTHO05D008511 3.5e-24 115.5 152 47.4
SalBow5G0260 Salvia bowleyana HOM05D007384 ORTHO05D008511 4.5e-24 115.2 151 47.0
Oeu028527.1 Olea europaea HOM05D007384 ORTHO05D008511 1.1e-22 110.5 152 46.1
Oeu028378.1 Olea europaea HOM05D007384 ORTHO05D008511 7.2e-22 107.8 159 50.3
Oeu028376.1 Olea europaea HOM05D007384 ORTHO05D008511 9.5e-22 107.5 159 50.3
SalBow6G3892 Salvia bowleyana HOM05D007384 ORTHO05D008511 6.1e-21 104.8 152 47.4
Cc07_g16090 Coffea canephora HOM05D007384 ORTHO05D008511 2.0e-19 99.8 157 40.1
Peaxi162Scf00323g00037 Petunia axillaris HOM05D007384 ORTHO05D008511 3.7e-18 95.5 161 46.0
MSTRG.2538 Avicennia marina HOM05D007384 ORTHO05D008511 6.3e-18 94.7 152 52.6
Migut.L00076 Erythranthe guttata HOM05D007384 ORTHO05D008511 6.3e-18 94.7 156 54.5
PGSC0003DMG400012958 Solanum tuberosum HOM05D007384 ORTHO05D008511 5.4e-17 91.7 154 37.0
Solyc04g053145.1 Solanum lycopersicum HOM05D007384 ORTHO05D008511 5.9e-16 88.2 152 37.5
Sopen04g023570 Solanum pennellii HOM05D007384 ORTHO05D008511 1.3e-15 87.0 152 38.2
unitig_736.g22624 Utricularia gibba HOM05D007384 ORTHO05D008511 8.6e-15 84.3 147 38.1
Dinv19495 Davidia involucrata HOM05D007384 ORTHO05D008511 2.5e-14 82.8 168 36.9
SGA_v2.0_scaffold2G01297 Striga asiatica HOM05D007384 ORTHO05D008511 1.2e-13 80.5 150 42.7
Dinv42700 Davidia involucrata HOM05D007384 ORTHO05D008511 2.3e-12 76.3 170 35.3
Lsat_1_v5_gn_2_65360 Lactuca sativa HOM05D007384 ORTHO05D008511 2.6e-11 72.8 162 35.2
Gohir.A10G086700 Gossypium hirsutum HOM05D007384 ORTHO05D008511 1.7e-10 70.1 156 37.2
HanXRQChr10g0295241 Helianthus annuus HOM05D007384 ORTHO05D008511 2.9e-10 69.3 144 34.0
Gorai.011G111700 Gossypium raimondii HOM05D007384 ORTHO05D008511 3.7e-10 68.9 156 36.5
Hund19659 Selenicereus undatus HOM05D007384 ORTHO05D008511 4.9e-10 68.6 154 34.4
Nitab4.5_0000471g0140 Nicotiana tabacum HOM05D007384 ORTHO05D008511 6.4e-10 68.2 159 43.4
Duzib187G0804 Durio zibethinus HOM05D007384 ORTHO05D008511 1.8e-09 66.6 150 32.7
unitig_899.g14602 Utricularia gibba HOM05D007384 ORTHO05D008511 1.8e-09 66.6 149 38.9
DCAR_001367 Daucus carota HOM05D007384 ORTHO05D008511 3.2e-09 65.9 144 43.8
Hund03542 Selenicereus undatus HOM05D007384 ORTHO05D008511 1.2e-08 63.9 159 33.3
Thecc.01G112100 Theobroma cacao HOM05D007384 ORTHO05D008511 2.0e-08 63.2 154 33.1
TWI77G0698 Tripterygium wilfordii HOM05D007384 ORTHO05D008511 2.0e-08 63.2 152 31.6
CiPaw.03G134700 Carya illinoinensis HOM05D007384 ORTHO05D008511 3.5e-08 62.4 166 33.1
Duzib187G1860 Durio zibethinus HOM05D007384 ORTHO05D008511 4.6e-08 62.0 161 30.4
Manes.13G077680 Manihot esculenta HOM05D007384 ORTHO05D008511 7.8e-08 61.2 162 41.4
Rhsim10G0013800 Rhododendron simsii HOM05D007384 ORTHO05D008511 1.0e-07 60.8 155 45.8
Glyma.08G141200 Glycine max HOM05D007384 ORTHO05D008511 1.3e-07 60.5 163 29.4
Sabra05G0069000 Salix brachista HOM05D007384 ORTHO05D008511 1.7e-07 60.1 166 30.7
Sc07g0001520 Simmondsia chinensis HOM05D007384 ORTHO05D008511 1.7e-07 60.1 152 34.2
ECA238G3631 Erigeron canadensis HOM05D007384 ORTHO05D008511 2.3e-07 59.7 83 43.4
Lj4g0022190 Lotus japonicus HOM05D007384 ORTHO05D008511 2.3e-07 59.7 167 34.7
Lj4g0025402 Lotus japonicus HOM05D007384 ORTHO05D008511 2.3e-07 59.7 167 34.7
Glyma.05G183400 Glycine max HOM05D007384 ORTHO05D008511 3.0e-07 59.3 151 33.1
TPR.G40723 Trifolium pratense HOM05D007384 ORTHO05D008511 5.0e-07 58.5 143 37.8
Potri.005G083900 Populus trichocarpa HOM05D007384 ORTHO05D008511 8.6e-07 57.8 161 31.1
THA.LOC104799256 Tarenaya hassleriana HOM05D012887 ORTHO05D008511 8.6e-07 57.8 165 37.6
Medtr3g094800 Medicago truncatula HOM05D007384 ORTHO05D008511 1.9e-06 56.6 161 32.3
TAR628G0188 Trochodendron aralioides HOM05D007384 ORTHO05D008511 1.9e-06 56.6 161 29.2
VMungo0251G1085 Vigna mungo HOM05D007384 ORTHO05D008511 2.5e-06 56.2 146 32.9
CSS0019294 Camellia sinensis var. sinensis HOM05D007384 ORTHO05D008511 3.3e-06 55.8 87 39.1
Gorai.003G046900 Gossypium raimondii HOM05D007384 ORTHO05D008511 3.3e-06 55.8 153 35.9
Lj1g0001463 Lotus japonicus HOM05D007384 ORTHO05D008511 4.3e-06 55.5 155 31.6
TAR520G0001 Trochodendron aralioides HOM05D007384 ORTHO05D008511 4.3e-06 55.5 161 28.6
CARHR278890 Cardamine hirsuta HOM05D012887 ORTHO05D008511 5.6e-06 55.1 172 30.8
FAN19G0612 Fragaria x ananassa HOM05D007384 ORTHO05D008511 7.3e-06 54.7 147 34.0
FvH4_1g22200 Fragaria vesca HOM05D007384 ORTHO05D008511 9.5e-06 54.3 147 34.0
Potri.007G081700 Populus trichocarpa HOM05D007384 ORTHO05D008511 9.5e-06 54.3 152 34.2


User provided reference genes

Program Settings