Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold47G17703 Striga asiatica HOM05D006130 ORTHO05D007491 8.0e-205 716.8 356 100.0
MSTRG.15753 Avicennia marina HOM05D006130 ORTHO05D007491 1.5e-126 456.8 370 63.2
Migut.L00069 Erythranthe guttata HOM05D006130 ORTHO05D007491 3.3e-118 429.1 371 60.1
SalBow5G2487 Salvia bowleyana HOM05D006130 ORTHO05D007491 9.4e-113 411.0 370 58.6
Oeu028522.1 Olea europaea HOM05D006130 ORTHO05D007491 9.7e-110 401.0 378 54.8
Dinv42687 Davidia involucrata HOM05D006130 ORTHO05D007491 5.7e-102 375.2 381 52.2
Dinv19481 Davidia involucrata HOM05D006130 ORTHO05D007491 6.7e-95 351.7 381 48.8
Cc07_g16320 Coffea canephora HOM05D006130 ORTHO05D007491 3.3e-94 349.4 380 48.2
Rhsim08G0006100 Rhododendron simsii HOM05D006130 ORTHO05D007491 2.0e-91 340.1 381 49.9
Cpa.g.sc191.11 Carica papaya HOM05D006130 ORTHO05D007491 2.1e-88 330.1 379 45.6
CAN.G347.1 Capsicum annuum HOM05D006130 ORTHO05D007491 5.2e-87 325.5 380 46.8
QL06p031976 Quercus lobata HOM05D006130 ORTHO05D007491 3.4e-86 322.8 378 46.8
Haze_25050 Corylus avellana HOM05D006130 ORTHO05D007491 6.3e-85 318.5 380 45.3
Peaxi162Scf00106g00208 Petunia axillaris HOM05D006130 ORTHO05D007491 1.4e-84 317.4 373 47.5
FAN23G0816 Fragaria x ananassa HOM05D006130 ORTHO05D007491 3.1e-84 316.2 380 44.5
FAN19G1269 Fragaria x ananassa HOM05D006130 ORTHO05D007491 9.1e-84 314.7 380 44.5
Cfa002758 Carpinus fangiana HOM05D006130 ORTHO05D007491 1.2e-83 314.3 381 44.4
Nitab4.5_0015691g0010 Nicotiana tabacum HOM05D006130 ORTHO05D007491 1.2e-83 314.3 381 47.8
PGSC0003DMG400031208 Solanum tuberosum HOM05D006130 ORTHO05D007491 5.9e-83 312.0 378 48.7
GSVIVG01022236001 Vitis vinifera HOM05D006130 ORTHO05D007491 7.7e-83 311.6 370 46.2
Aqoxy7G04042 Aquilegia oxysepala HOM05D006130 ORTHO05D007491 1.3e-82 310.8 383 46.5
Thecc.01G113900 Theobroma cacao HOM05D006130 ORTHO05D007491 1.7e-82 310.5 383 45.2
vmacro18637 Vaccinium macrocarpon HOM05D006130 ORTHO05D007491 2.2e-82 310.1 359 48.2
Solyc04g051780.3 Solanum lycopersicum HOM05D006130 ORTHO05D007491 5.0e-82 308.9 377 47.5
CiPaw.04G091300 Carya illinoinensis HOM05D006130 ORTHO05D007491 6.5e-82 308.5 383 43.6
Atru.chr4.339 Acer truncatum HOM05D006130 ORTHO05D007491 1.5e-81 307.4 385 45.7
MD15G1331600 Malus domestica HOM05D006130 ORTHO05D007491 1.5e-81 307.4 372 46.2
Eucgr.H04843 Eucalyptus grandis HOM05D006130 ORTHO05D007491 1.9e-81 307.0 384 44.5
RcHm_v2.0_Chr2g0117041 Rosa chinensis HOM05D006130 ORTHO05D007491 2.5e-81 306.6 381 45.4
Prupe.6G171600 Prunus persica HOM05D006130 ORTHO05D007491 4.2e-81 305.8 378 45.8
MBI05_g29098_MAGBIO Magnolia biondii HOM05D006130 ORTHO05D007491 9.4e-81 304.7 380 42.9
Nitab4.5_0004840g0040 Nicotiana tabacum HOM05D006130 ORTHO05D007491 9.4e-81 304.7 373 48.3
ECA238G3253 Erigeron canadensis HOM05D006130 ORTHO05D007491 4.7e-80 302.4 374 44.4
Lj2C566T4 Lonicera japonica HOM05D006130 ORTHO05D007491 6.1e-80 302.0 375 44.8
Sabra07G0067600 Salix brachista HOM05D006130 ORTHO05D007491 1.0e-79 301.2 378 44.2
Ciclev10026167m.g Citrus clementina HOM05D006130 ORTHO05D007491 1.4e-79 300.8 381 45.9
Gorai.007G244700 Gossypium raimondii HOM05D006130 ORTHO05D007491 4.0e-79 299.3 387 42.9
CANSAT80G2857 Cannabis sativa HOM05D006130 ORTHO05D007491 6.8e-79 298.5 377 44.0
Nn5g28889 Nelumbo nucifera HOM05D006130 ORTHO05D007491 6.8e-79 298.5 390 45.4
HanXRQChr14g0445741 Helianthus annuus HOM05D006130 ORTHO05D007491 8.8e-79 298.1 367 45.0
TWI74G0604 Tripterygium wilfordii HOM05D006130 ORTHO05D007491 8.8e-79 298.1 379 44.9
Duzib264G0573 Durio zibethinus HOM05D006130 ORTHO05D007491 1.5e-78 297.4 385 43.1
Gohir.D11G231600 Gossypium hirsutum HOM05D006130 ORTHO05D007491 1.5e-78 297.4 387 42.9
Manes.12G143200 Manihot esculenta HOM05D006130 ORTHO05D007491 2.0e-78 297.0 384 45.1
Sopen04g023130 Solanum pennellii HOM05D006130 ORTHO05D007491 3.4e-78 296.2 372 46.8
Gohir.A11G197900 Gossypium hirsutum HOM05D006130 ORTHO05D007491 2.2e-77 293.5 387 43.2
Potri.007G080500 Populus trichocarpa HOM05D006130 ORTHO05D007491 2.8e-77 293.1 381 44.6
FAN26G2148 Fragaria x ananassa HOM05D006130 ORTHO05D007491 8.3e-77 291.6 380 43.4
PGR102G0730 Punica granatum HOM05D006130 ORTHO05D007491 1.1e-76 291.2 384 47.1
Lsat_1_v5_gn_2_67140 Lactuca sativa HOM05D006130 ORTHO05D007491 2.4e-76 290.0 373 44.2
Lsat_1_v5_gn_2_93681 Lactuca sativa HOM05D006130 ORTHO05D007491 3.1e-76 289.7 373 44.2
DCAR_001374 Daucus carota HOM05D006130 ORTHO05D007491 5.4e-76 288.9 426 39.7
Lalb_Chr11g0068091 Lupinus albus HOM05D006130 ORTHO05D007491 5.4e-76 288.9 379 41.4
PSO210G3121 Papaver somniferum HOM05D006130 ORTHO05D007491 7.0e-76 288.5 372 44.6
PSO170G1695 Papaver somniferum HOM05D006130 ORTHO05D007491 1.2e-75 287.7 371 45.3
CsaV3_6G002440 Cucumis sativus L. HOM05D006130 ORTHO05D007491 1.5e-73 280.8 377 43.8
Duzib147G1554 Durio zibethinus HOM05D006130 ORTHO05D007491 1.5e-73 280.8 355 44.8
MELO3C025043.2 Cucumis melo HOM05D006130 ORTHO05D007491 4.3e-73 279.3 377 43.5
EL10Ac6g14758 Beta vulgaris HOM05D006130 ORTHO05D007491 6.1e-72 275.4 372 43.5
unitig_62.g23431 Utricularia gibba HOM05D006130 ORTHO05D007491 5.2e-71 272.3 363 44.4
Hund03536 Selenicereus undatus HOM05D006130 ORTHO05D007491 6.8e-71 271.9 397 41.8
Thhalv10004393m.g Eutrema salsugineum HOM05D006130 ORTHO05D007491 1.2e-70 271.2 385 41.6
Aa31LG1G17100 Aethionema arabicum HOM05D006130 ORTHO05D007491 2.0e-70 270.4 372 41.9
THA.LOC104818474 Tarenaya hassleriana HOM05D006130 ORTHO05D007491 3.4e-70 269.6 386 42.2
Sed0017229 Sechium edule HOM05D006130 ORTHO05D007491 4.4e-70 269.2 381 43.6
Ca_16897_v3 Cicer arietinum L. HOM05D006130 ORTHO05D007491 9.8e-70 268.1 378 41.5
Eucgr.H04852 Eucalyptus grandis HOM05D006130 ORTHO05D007491 1.7e-69 267.3 375 41.6
C03p61330 Brassica napus HOM05D006130 ORTHO05D007491 2.9e-69 266.5 381 42.5
AUR62016283 Chenopodium quinoa HOM05D006130 ORTHO05D007491 3.7e-69 266.2 374 42.5
ClCG11G005560 Citrullus lanatus HOM05D006130 ORTHO05D007491 4.1e-68 262.7 386 42.7
CDE09G1360 Ceratophyllum demersum HOM05D006130 ORTHO05D007491 7.0e-68 261.9 384 41.7
BcaC01g02716 Brassica carinata HOM05D006130 ORTHO05D007491 1.2e-67 261.2 381 42.0
Sp2g27910 Schrenkiella parvula HOM05D006130 ORTHO05D007491 1.2e-67 261.2 379 40.6
TPR.G23729 Trifolium pratense HOM05D006130 ORTHO05D007491 3.5e-67 259.6 380 41.1
AL8G42310 Arabidopsis lyrata HOM05D006130 ORTHO05D007491 1.0e-66 258.1 385 41.8
Phvul.009G139000 Phaseolus vulgaris HOM05D006130 ORTHO05D007491 1.0e-66 258.1 375 41.3
Psat5g066000 Pisum sativum HOM05D006130 ORTHO05D007491 1.0e-66 258.1 378 39.9
HPP92_016462 Vanilla planifolia HOM05D006130 ORTHO05D007491 3.0e-66 256.5 376 39.9
Lj1g0022742 Lotus japonicus HOM05D006130 ORTHO05D007491 5.0e-66 255.8 376 40.7
arahy.Tifrunner.gnm1.ann1.JIC903 Arachis hypogaea HOM05D006130 ORTHO05D007491 6.6e-66 255.4 371 38.5
HPP92_027147 Vanilla planifolia HOM05D006130 ORTHO05D007491 6.6e-66 255.4 369 40.4
Medtr3g095020 Medicago truncatula HOM05D006130 ORTHO05D007491 1.9e-65 253.8 380 40.5
AUR62003302 Chenopodium quinoa HOM05D006130 ORTHO05D007491 3.3e-65 253.1 378 42.3
Glyma.04G218800 Glycine max HOM05D006130 ORTHO05D007491 4.3e-65 252.7 375 40.0
A06p31630 Brassica napus HOM05D006130 ORTHO05D007491 2.1e-64 250.4 377 41.6
Carub.0008s2566 Capsella rubella HOM05D006130 ORTHO05D007491 2.1e-64 250.4 376 40.7
arahy.Tifrunner.gnm1.ann1.S5QZ0Z Arachis hypogaea HOM05D006130 ORTHO05D007491 2.8e-64 250.0 371 38.0
BraA06t26099Z Brassica rapa HOM05D006130 ORTHO05D007491 2.8e-64 250.0 375 42.1
ATR0665G503 Amborella trichopoda HOM05D006130 ORTHO05D007491 1.0e-63 248.1 386 36.8
CARHR278840 Cardamine hirsuta HOM05D006130 ORTHO05D007491 1.4e-63 247.7 380 40.0
VMungo1309G1738 Vigna mungo HOM05D006130 ORTHO05D007491 2.3e-63 246.9 348 42.0
BolC3t18393H Brassica oleracea HOM05D006130 ORTHO05D007491 3.4e-62 243.0 377 40.6
Actinidia12211 Actinidia chinensis HOM05D006130 ORTHO05D007491 5.8e-62 242.3 266 49.2
BcaB02g09834 Brassica carinata HOM05D006130 ORTHO05D007491 5.8e-62 242.3 381 40.9
SEGI_25559 Sequoiadendron giganteum HOM05D006130 ORTHO05D007491 5.8e-62 242.3 405 35.6
FvH4_1g22740 Fragaria vesca HOM05D006130 ORTHO05D007491 9.8e-62 241.5 322 41.9
Eucgr.H04859 Eucalyptus grandis HOM05D006130 ORTHO05D007491 3.7e-61 239.6 373 38.9
Hma1.2p1_0375F.1_g138770 Hydrangea macrophylla HOM05D006130 ORTHO05D007491 1.1e-60 238.0 301 45.2
Os04g0640800 Oryza sativa ssp. japonica HOM05D006130 ORTHO05D007491 1.4e-60 237.7 371 38.8
TAR628G0645 Trochodendron aralioides HOM05D006130 ORTHO05D007491 7.0e-60 235.3 291 48.5
GSVIVG01022231001 Vitis vinifera HOM05D006130 ORTHO05D007491 7.0e-60 235.3 369 37.9
Zm00001eb431860 Zea mays HOM05D006130 ORTHO05D007491 7.8e-59 231.9 377 37.9
Ah.03g141370 Amaranthus hybridus HOM05D006130 ORTHO05D007491 1.8e-55 220.7 289 43.6
SMO358G0378 Selaginella moellendorffii HOM05D006130 ORTHO05D007491 4.0e-55 219.5 408 34.3
Eucgr.H04856 Eucalyptus grandis HOM05D006130 ORTHO05D007491 4.9e-53 212.6 380 35.3
Sc03g0004370 Simmondsia chinensis HOM05D006130 ORTHO05D007491 2.7e-51 206.8 286 44.1
Ah.14g080600 Amaranthus hybridus HOM05D006130 ORTHO05D007491 6.6e-50 202.2 348 36.5
Eucgr.H04846 Eucalyptus grandis HOM05D006130 ORTHO05D007491 2.6e-46 190.3 352 34.4
Mapoly0014s0114 Marchantia polymorpha HOM05D006130 ORTHO05D007491 5.8e-46 189.1 407 32.4
Pp3c16_16240 Physcomitrium patens HOM05D006130 ORTHO05D007491 9.9e-46 188.3 413 32.0
AT5G64830 Arabidopsis thaliana HOM05D006130 ORTHO05D007491 2.7e-43 180.3 282 41.1
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.0e-43 179.1 193 49.7
Eucgr.H04861 Eucalyptus grandis HOM05D006130 ORTHO05D007491 6.8e-39 165.6 174 51.7
COL.COLO4_11003 Corchorus olitorius HOM05D006130 ORTHO05D007491 1.5e-38 164.5 367 30.5
SGA_v2.0_scaffold34G13625 Striga asiatica HOM05D006130 ORTHO05D007491 2.6e-38 163.7 90 80.0
Glyma.06G147000 Glycine max HOM05D006130 ORTHO05D007491 2.9e-37 160.2 224 39.3
SGA_v2.0_scaffold32G12965 Striga asiatica HOM05D006130 ORTHO05D007491 4.0e-31 139.8 79 87.3
AagrBONN_evm.TU.Sc2ySwM_228.1848 Anthoceros agrestis HOM05D006130 ORTHO05D007491 2.1e-19 100.9 86 50.0
AagrBONN_evm.TU.Sc2ySwM_228.1847 Anthoceros agrestis HOM05D006130 ORTHO05D007491 1.8e-18 97.8 151 37.1
Actinidia35264 Actinidia chinensis HOM05D006130 ORTHO05D007491 3.9e-18 96.7 87 54.0
CBR_g30690 Chara braunii HOM05D006130 ORTHO05D007491 1.8e-15 87.8 275 29.5
MCO11G927 Micromonas commoda HOM05D006130 ORTHO05D007491 9.3e-12 75.5 442 21.7
Oeu028521.1 Olea europaea HOM05D006130 ORTHO05D007491 4.1e-07 60.1 31 83.9
HanXRQChr08g0218711 Helianthus annuus HOM05D006130 ORTHO05D007491 1.2e-06 58.5 51 47.1
Sc05g0003490 Simmondsia chinensis HOM05D005189 ORTHO05D006093 3.4e-06 57.0 348 22.1


User provided reference genes

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