Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold47G17682 Striga asiatica HOM05D005305 ORTHO05D006394 4.5e-159 564.7 316 100.0
Migut.L00049 Erythranthe guttata HOM05D005305 ORTHO05D006394 1.4e-56 224.2 181 63.0
SalBow5G2993 Salvia bowleyana HOM05D005305 ORTHO05D006394 1.8e-51 207.2 222 55.0
Oeu035198.1 Olea europaea HOM05D005305 ORTHO05D006394 5.1e-46 189.1 226 50.4
Nitab4.5_0001582g0090 Nicotiana tabacum HOM05D005305 ORTHO05D006394 5.0e-41 172.6 169 53.8
Solyc11g005490.1 Solanum lycopersicum HOM05D005305 ORTHO05D006394 6.5e-41 172.2 199 50.3
Sopen11g001490 Solanum pennellii HOM05D005305 ORTHO05D006394 2.5e-40 170.2 199 49.7
PGSC0003DMG400035592 Solanum tuberosum HOM05D005305 ORTHO05D006394 6.1e-39 165.6 199 49.2
Nitab4.5_0002138g0070 Nicotiana tabacum HOM05D005305 ORTHO05D006394 7.9e-39 165.2 169 52.1
CAN.G516.6 Capsicum annuum HOM05D005305 ORTHO05D006394 2.0e-37 160.6 187 49.2
unitig_32.g10686 Utricularia gibba HOM05D005305 ORTHO05D006394 1.2e-34 151.4 228 42.1
Nn1g06067 Nelumbo nucifera HOM05D005305 ORTHO05D006394 1.2e-26 124.8 208 40.9
Potri.019G002300 Populus trichocarpa HOM05D005305 ORTHO05D006394 7.7e-26 122.1 166 45.8
Thecc.01G118700 Theobroma cacao HOM05D005305 ORTHO05D006394 1.0e-25 121.7 208 39.9
Sabra19G0004600 Salix brachista HOM05D005305 ORTHO05D006394 5.0e-25 119.4 188 41.0
AUR62005501 Chenopodium quinoa HOM05D005305 ORTHO05D006394 6.5e-25 119.0 197 40.6
Duzib187G0918 Durio zibethinus HOM05D005305 ORTHO05D006394 1.1e-24 118.2 206 38.8
TAR624G0561 Trochodendron aralioides HOM05D005305 ORTHO05D006394 3.2e-24 116.7 157 44.6
Nn5g28774 Nelumbo nucifera HOM05D005305 ORTHO05D006394 5.5e-24 115.9 212 38.7
Potri.001G306800 Populus trichocarpa HOM05D005305 ORTHO05D006394 5.5e-24 115.9 164 45.1
AUR62024239 Chenopodium quinoa HOM05D005305 ORTHO05D006394 9.4e-24 115.2 197 38.6
DCAR_001409 Daucus carota HOM05D005305 ORTHO05D006394 2.1e-23 114.0 190 40.0
Peaxi162Scf00025g00263 Petunia axillaris HOM05D005305 ORTHO05D006394 2.7e-23 113.6 117 55.6
Ah.03g133360 Amaranthus hybridus HOM05D005305 ORTHO05D006394 6.1e-23 112.5 161 43.5
COL.COLO4_22382 Corchorus olitorius HOM05D005305 ORTHO05D006394 6.1e-23 112.5 186 41.4
Sc04g0009640 Simmondsia chinensis HOM05D005305 ORTHO05D006394 8.0e-23 112.1 255 35.7
Manes.13G081800 Manihot esculenta HOM05D005305 ORTHO05D006394 3.0e-22 110.2 185 37.8
Aqoxy6G00392 Aquilegia oxysepala HOM05D005305 ORTHO05D006394 4.0e-22 109.8 219 37.9
Gohir.A11G210433 Gossypium hirsutum HOM05D005305 ORTHO05D006394 4.0e-22 109.8 188 39.4
TWI31G0537 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 4.0e-22 109.8 239 38.5
CsaV3_6G037300 Cucumis sativus L. HOM05D005305 ORTHO05D006394 1.2e-21 108.2 189 37.0
Gohir.D12G092500 Gossypium hirsutum HOM05D005305 ORTHO05D006394 1.2e-21 108.2 188 38.8
Gorai.008G100000 Gossypium raimondii HOM05D005305 ORTHO05D006394 1.2e-21 108.2 188 38.8
Sed0001621 Sechium edule HOM05D005305 ORTHO05D006394 1.5e-21 107.8 218 36.7
Sed0003606 Sechium edule HOM05D005305 ORTHO05D006394 2.6e-21 107.1 235 36.2
Cpa.g.sc72.34 Carica papaya HOM05D005305 ORTHO05D006394 5.7e-21 105.9 197 39.1
CiPaw.05G041500 Carya illinoinensis HOM05D005305 ORTHO05D006394 7.5e-21 105.5 179 41.3
Manes.12G149900 Manihot esculenta HOM05D005305 ORTHO05D006394 9.8e-21 105.1 165 38.8
A06p11170 Brassica napus HOM05D005305 ORTHO05D006394 1.3e-20 104.8 234 35.5
Dinv19341 Davidia involucrata HOM05D005305 ORTHO05D006394 1.7e-20 104.4 278 32.7
BcaC05g25447 Brassica carinata HOM05D005305 ORTHO05D006394 2.2e-20 104.0 190 39.5
C05p13290 Brassica napus HOM05D005305 ORTHO05D006394 2.2e-20 104.0 190 39.5
MELO3C014385.2 Cucumis melo HOM05D005305 ORTHO05D006394 2.8e-20 103.6 231 36.4
CSS0043111 Camellia sinensis var. sinensis HOM05D005305 ORTHO05D006394 3.7e-20 103.2 228 39.0
Medtr2g007870 Medicago truncatula HOM05D005305 ORTHO05D006394 3.7e-20 103.2 160 43.8
ClCG09G014160 Citrullus lanatus HOM05D005305 ORTHO05D006394 6.3e-20 102.4 204 38.2
BolC5t30066H Brassica oleracea HOM05D005305 ORTHO05D006394 8.3e-20 102.1 234 35.0
Lj1C922T21 Lonicera japonica HOM05D005305 ORTHO05D006394 8.3e-20 102.1 241 33.6
SGA_v2.0_scaffold65G22173 Striga asiatica HOM05D005305 ORTHO05D006394 8.3e-20 102.1 70 75.7
BraA06t24297Z Brassica rapa HOM05D005305 ORTHO05D006394 1.1e-19 101.7 228 36.0
PSO730G0002 Papaver somniferum HOM05D005305 ORTHO05D006394 1.1e-19 101.7 179 35.8
Lj6g0020123 Lotus japonicus HOM05D005305 ORTHO05D006394 1.4e-19 101.3 251 35.9
BcaB02g06584 Brassica carinata HOM05D005305 ORTHO05D006394 2.4e-19 100.5 234 34.2
TWI79G0764 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 2.4e-19 100.5 157 45.9
Oeu000200.2 Olea europaea HOM05D005305 ORTHO05D006394 3.1e-19 100.1 196 38.8
QL11p019060 Quercus lobata HOM05D005305 ORTHO05D006394 7.0e-19 99.0 164 37.8
VMungo0540G1828 Vigna mungo HOM05D005305 ORTHO05D006394 7.0e-19 99.0 250 37.6
arahy.Tifrunner.gnm1.ann1.ZL3PAB Arachis hypogaea HOM05D005305 ORTHO05D006394 1.6e-18 97.8 232 34.5
arahy.Tifrunner.gnm1.ann1.I1A2NR Arachis hypogaea HOM05D005305 ORTHO05D006394 2.0e-18 97.4 231 34.6
TPR.G19715 Trifolium pratense HOM05D005305 ORTHO05D006394 2.7e-18 97.1 262 35.9
RcHm_v2.0_Chr7g0223251 Rosa chinensis HOM05D005305 ORTHO05D006394 4.5e-18 96.3 158 40.5
Ca_00097_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 5.9e-18 95.9 236 36.9
Ca_29935_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 5.9e-18 95.9 236 36.9
Dinv02718 Davidia involucrata HOM05D005305 ORTHO05D006394 5.9e-18 95.9 144 43.8
MD15G1420000 Malus domestica HOM05D005305 ORTHO05D006394 5.9e-18 95.9 158 41.1
Psat1g219600 Pisum sativum HOM05D005305 ORTHO05D006394 5.9e-18 95.9 219 36.1
BcaB03g13072 Brassica carinata HOM05D005305 ORTHO05D006394 1.3e-17 94.7 229 34.5
FAN13G2550 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.3e-17 94.7 158 42.4
Actinidia33832 Actinidia chinensis HOM05D005305 ORTHO05D006394 1.7e-17 94.4 162 37.7
A08p31700 Brassica napus HOM05D005305 ORTHO05D006394 1.7e-17 94.4 230 36.5
ECA236G3147 Erigeron canadensis HOM05D005305 ORTHO05D006394 1.7e-17 94.4 157 39.5
Atru.chr4.616 Acer truncatum HOM05D005305 ORTHO05D006394 2.9e-17 93.6 209 34.9
AT1G15190 Arabidopsis thaliana HOM05D005305 ORTHO05D006394 2.9e-17 93.6 232 34.9
Prupe.1G566000 Prunus persica HOM05D005305 ORTHO05D006394 3.8e-17 93.2 224 35.7
Phvul.006G211300 Phaseolus vulgaris HOM05D005305 ORTHO05D006394 1.5e-16 91.3 225 36.9
Lsat_1_v5_gn_7_79481 Lactuca sativa HOM05D005305 ORTHO05D006394 1.9e-16 90.9 205 35.1
Carub.0001s1494 Capsella rubella HOM05D005305 ORTHO05D006394 2.5e-16 90.5 164 39.6
AL1G27270 Arabidopsis lyrata HOM05D005305 ORTHO05D006394 3.2e-16 90.1 239 33.5
Thhalv10009974m.g Eutrema salsugineum HOM05D005305 ORTHO05D006394 3.2e-16 90.1 232 33.6
BraA08t35092Z Brassica rapa HOM05D005305 ORTHO05D006394 4.2e-16 89.7 210 37.1
Aa31LG2G8790 Aethionema arabicum HOM05D005305 ORTHO05D006394 5.5e-16 89.4 189 36.0
FvH4_5g29740 Fragaria vesca HOM05D005305 ORTHO05D006394 5.5e-16 89.4 238 35.7
Sp1g13500 Schrenkiella parvula HOM05D005305 ORTHO05D006394 5.5e-16 89.4 228 34.6
Glyma.08G183700 Glycine max HOM05D005305 ORTHO05D006394 7.2e-16 89.0 226 37.2
A02p31660 Brassica napus HOM05D005305 ORTHO05D006394 9.4e-16 88.6 160 38.1
Lalb_Chr15g0090581 Lupinus albus HOM05D005305 ORTHO05D006394 9.4e-16 88.6 216 35.2
HanXRQChr10g0300271 Helianthus annuus HOM05D005305 ORTHO05D006394 2.1e-15 87.4 164 33.5
BcaC07g38772 Brassica carinata HOM05D005305 ORTHO05D006394 2.7e-15 87.0 235 35.7
C08p17050 Brassica napus HOM05D005305 ORTHO05D006394 2.7e-15 87.0 235 35.7
BolC8t49330H Brassica oleracea HOM05D005305 ORTHO05D006394 2.7e-15 87.0 235 35.7
BolC2t10994H Brassica oleracea HOM05D005305 ORTHO05D006394 8.0e-15 85.5 239 31.8
FAN04G1743 Fragaria x ananassa HOM05D005305 ORTHO05D006394 8.0e-15 85.5 222 34.2
FAN08G2621 Fragaria x ananassa HOM05D005305 ORTHO05D006394 8.0e-15 85.5 261 31.8
FAN22G2313 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.8e-14 84.3 157 35.7
Ciclev10001162m.g Citrus clementina HOM05D005305 ORTHO05D006394 2.3e-14 84.0 231 33.3
HanXRQChr11g0337491 Helianthus annuus HOM05D005305 ORTHO05D006394 2.3e-14 84.0 157 37.6
MBI17_g24663_MAGBIO Magnolia biondii HOM05D005305 ORTHO05D006394 2.3e-14 84.0 163 36.8
HanXRQChr10g0294801 Helianthus annuus HOM05D005305 ORTHO05D006394 8.8e-14 82.0 234 31.6
Sp2g12560 Schrenkiella parvula HOM05D005305 ORTHO05D006394 8.8e-14 82.0 192 33.3
CARHR015700 Cardamine hirsuta HOM05D005305 ORTHO05D006394 3.4e-13 80.1 221 33.0
MBI17_g24510_MAGBIO Magnolia biondii HOM05D005305 ORTHO05D006394 3.4e-13 80.1 238 31.5
EL10Ac6g13873 Beta vulgaris HOM05D005305 ORTHO05D006394 1.7e-12 77.8 125 40.0
Lsat_1_v5_gn_5_107520 Lactuca sativa HOM05D005305 ORTHO05D006394 2.2e-12 77.4 250 28.4
TAR381G1643 Trochodendron aralioides HOM05D005305 ORTHO05D006394 2.2e-12 77.4 104 44.2
Atru.chr6.974 Acer truncatum HOM05D005305 ORTHO05D006394 1.4e-11 74.7 205 33.2
ECA234G0387 Erigeron canadensis HOM05D005305 ORTHO05D006394 5.9e-10 69.3 213 26.8
FvH4_2g02450 Fragaria vesca HOM05D005305 ORTHO05D006394 1.3e-09 68.2 164 34.8
FvH4_4g13350 Fragaria vesca HOM05D005305 ORTHO05D006394 1.3e-09 68.2 111 42.3
BraA02t08169Z Brassica rapa HOM05D005305 ORTHO05D006394 6.6e-09 65.9 161 33.5
PGR042G0513 Punica granatum HOM05D005305 ORTHO05D006394 1.1e-08 65.1 210 29.5
FvH4_2g02380 Fragaria vesca HOM05D005305 ORTHO05D006394 1.9e-08 64.3 163 33.7
ATR0311G001 Amborella trichopoda HOM05D005305 ORTHO05D006394 9.5e-08 62.0 227 30.0
THA.LOC104814335 Tarenaya hassleriana HOM05D005423 ORTHO05D006223 2.8e-07 60.5 102 39.2
FAN12G2268 Fragaria x ananassa HOM05D005305 ORTHO05D006394 4.7e-07 59.7 85 40.0
FvH4_4g36540 Fragaria vesca HOM05D005305 ORTHO05D006394 6.1e-07 59.3 85 40.0
Manes.12G138600 Manihot esculenta HOM05D006072 ORTHO05D007363 1.0e-06 58.5 127 33.9
C02p49000 Brassica napus HOM05D005305 ORTHO05D006394 3.0e-06 57.0 99 37.4
FAN02G4273 Fragaria x ananassa HOM05D005305 ORTHO05D006394 3.0e-06 57.0 108 38.0
A06p18470 Brassica napus HOM05D005423 ORTHO05D006223 4.0e-06 56.6 135 35.6
Duzib160G0446 Durio zibethinus HOM05D005423 ORTHO05D006223 4.0e-06 56.6 112 36.6
EL10Ac5g10610 Beta vulgaris HOM05D005423 ORTHO05D006223 6.8e-06 55.8 142 33.1
C08p24310 Brassica napus HOM05D005423 ORTHO05D006223 6.8e-06 55.8 102 38.2
BolC8t50049H Brassica oleracea HOM05D005423 ORTHO05D006223 6.8e-06 55.8 102 38.2
Glyma.08G139000 Glycine max HOM05D006072 ORTHO05D007363 6.8e-06 55.8 131 31.3
CiPaw.03G138500 Carya illinoinensis HOM05D006072 ORTHO05D007363 8.9e-06 55.5 134 32.1


User provided reference genes

Program Settings