Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold47G17644 Striga asiatica HOM05D000625 ORTHO05D000467 3.5e-67 258.1 124 100.0
Gohir.D03G013100 Gossypium hirsutum HOM05D000625 ORTHO05D000467 4.8e-16 88.2 113 43.4
Gorai.003G013400 Gossypium raimondii HOM05D000625 ORTHO05D000467 1.1e-15 87.0 113 43.4
Duzib147G0259 Durio zibethinus HOM05D000625 ORTHO05D000467 1.2e-14 83.6 112 40.2
CAN.G358.56 Capsicum annuum HOM05D000625 ORTHO05D000467 5.9e-14 81.3 114 46.5
MSTRG.3836 Avicennia marina HOM05D000625 ORTHO05D000467 1.3e-13 80.1 107 49.5
COL.COLO4_22044 Corchorus olitorius HOM05D000625 ORTHO05D000467 1.3e-13 80.1 113 38.9
Thecc.01G032000 Theobroma cacao HOM05D000625 ORTHO05D000467 2.2e-13 79.3 116 41.4
Duzib187G1890 Durio zibethinus HOM05D000625 ORTHO05D000467 3.8e-13 78.6 113 39.8
THA.LOC104820189 Tarenaya hassleriana HOM05D000625 ORTHO05D000467 6.5e-13 77.8 122 39.3
Oeu063198.2 Olea europaea HOM05D000625 ORTHO05D000467 8.5e-13 77.4 114 45.6
PGSC0003DMG400003516 Solanum tuberosum HOM05D000625 ORTHO05D000467 1.5e-12 76.6 109 45.0
CANSAT01G2037 Cannabis sativa HOM05D000625 ORTHO05D000467 1.2e-11 73.6 129 41.1
Gohir.D11G189600 Gossypium hirsutum HOM05D000625 ORTHO05D000467 1.2e-11 73.6 113 35.4
Gorai.007G201800 Gossypium raimondii HOM05D000625 ORTHO05D000467 1.2e-11 73.6 113 35.4
Prupe.7G157600 Prunus persica HOM05D000625 ORTHO05D000467 1.2e-11 73.6 112 41.1
Sopen02g029730 Solanum pennellii HOM05D000625 ORTHO05D000467 1.2e-11 73.6 109 45.0
PGR102G1850 Punica granatum HOM05D000625 ORTHO05D000467 1.6e-11 73.2 112 42.0
RcHm_v2.0_Chr2g0100991 Rosa chinensis HOM05D000625 ORTHO05D000467 1.6e-11 73.2 118 39.0
Manes.01G137600 Manihot esculenta HOM05D000625 ORTHO05D000467 2.7e-11 72.4 117 38.5
TWI09G0793 Tripterygium wilfordii HOM05D000625 ORTHO05D000467 2.7e-11 72.4 109 39.4
Manes.02G096000 Manihot esculenta HOM05D000625 ORTHO05D000467 3.6e-11 72.0 117 38.5
Dinv13499 Davidia involucrata HOM05D000625 ORTHO05D000467 4.7e-11 71.6 102 40.2
MD00G1129800 Malus domestica HOM05D000625 ORTHO05D000467 1.0e-10 70.5 112 40.2
MD15G1257600 Malus domestica HOM05D000625 ORTHO05D000467 1.0e-10 70.5 112 40.2
Potri.007G022600 Populus trichocarpa HOM05D000625 ORTHO05D000467 1.0e-10 70.5 119 37.8
FAN28G1818 Fragaria x ananassa HOM05D000625 ORTHO05D000467 1.4e-10 70.1 116 40.5
Sc03g0003100 Simmondsia chinensis HOM05D000625 ORTHO05D000467 1.4e-10 70.1 111 42.3
GSVIVG01018928001 Vitis vinifera HOM05D000625 ORTHO05D000467 1.4e-10 70.1 100 39.0
FvH4_1g12901 Fragaria vesca HOM05D000625 ORTHO05D000467 2.3e-10 69.3 116 40.5
Sed0026766 Sechium edule HOM05D000625 ORTHO05D000467 2.3e-10 69.3 112 40.2
FAN23G2045 Fragaria x ananassa HOM05D000625 ORTHO05D000467 3.0e-10 68.9 116 40.5
Lj2A456T55 Lonicera japonica HOM05D000625 ORTHO05D000467 3.0e-10 68.9 121 38.0
Rhsim10G0124300 Rhododendron simsii HOM05D000625 ORTHO05D000467 3.0e-10 68.9 105 43.8
Sabra07G0019700 Salix brachista HOM05D000625 ORTHO05D000467 3.0e-10 68.9 121 39.7
Sp7g34170 Schrenkiella parvula HOM05D000625 ORTHO05D000467 3.0e-10 68.9 98 40.8
SGA_v2.0_scaffold47G17646 Striga asiatica HOM05D000625 ORTHO05D000467 3.0e-10 68.9 98 42.9
Aa31LG6G13300 Aethionema arabicum HOM05D000625 ORTHO05D000467 5.2e-10 68.2 116 36.2
FAN19G0391 Fragaria x ananassa HOM05D000625 ORTHO05D000467 6.8e-10 67.8 116 40.5
Potri.005G120700 Populus trichocarpa HOM05D000625 ORTHO05D000467 6.8e-10 67.8 119 37.0
Solyc02g085030.4 Solanum lycopersicum HOM05D000625 ORTHO05D000467 6.8e-10 67.8 109 43.1
CARHR244830 Cardamine hirsuta HOM05D000625 ORTHO05D000467 8.8e-10 67.4 119 33.6
CiPaw.01G044200 Carya illinoinensis HOM05D000625 ORTHO05D000467 8.8e-10 67.4 113 39.8
FAN26G1406 Fragaria x ananassa HOM05D000625 ORTHO05D000467 8.8e-10 67.4 116 38.8
AL7G14550 Arabidopsis lyrata HOM05D000625 ORTHO05D000467 1.5e-09 66.6 118 34.7
Sabra05G0099500 Salix brachista HOM05D000625 ORTHO05D000467 1.5e-09 66.6 125 36.0
BraA01t00223Z Brassica rapa HOM05D000625 ORTHO05D000467 2.0e-09 66.2 110 36.4
Migut.L00023 Erythranthe guttata HOM05D000625 ORTHO05D000467 2.0e-09 66.2 95 48.4
Sc16g0002620 Simmondsia chinensis HOM05D000625 ORTHO05D000467 2.0e-09 66.2 109 38.5
TWI73G0600 Tripterygium wilfordii HOM05D000625 ORTHO05D000467 2.0e-09 66.2 109 39.4
BolC1t00244H Brassica oleracea HOM05D000625 ORTHO05D000467 2.6e-09 65.9 110 36.4
Duzib264G0369 Durio zibethinus HOM05D000625 ORTHO05D000467 2.6e-09 65.9 99 38.4
A01p02350 Brassica napus HOM05D000625 ORTHO05D000467 3.4e-09 65.5 108 37.0
C01p02560 Brassica napus HOM05D000625 ORTHO05D000467 3.4e-09 65.5 110 36.4
CiPaw.02G019900 Carya illinoinensis HOM05D000625 ORTHO05D000467 3.4e-09 65.5 113 37.2
Psat4g094640 Pisum sativum HOM05D000625 ORTHO05D000467 3.4e-09 65.5 112 38.4
Sed0010746 Sechium edule HOM05D000625 ORTHO05D000467 3.4e-09 65.5 112 37.5
AT4G36520 Arabidopsis thaliana HOM05D000625 ORTHO05D000467 4.4e-09 65.1 119 35.3
Cc07_g09800 Coffea canephora HOM05D000625 ORTHO05D000467 4.4e-09 65.1 99 40.4
Dinv40006 Davidia involucrata HOM05D000625 ORTHO05D000467 4.4e-09 65.1 109 35.8
Actinidia19937 Actinidia chinensis HOM05D000625 ORTHO05D000467 5.7e-09 64.7 112 37.5
MELO3C007839.2 Cucumis melo HOM05D000625 ORTHO05D000467 5.7e-09 64.7 112 37.5
BcaNung00727 Brassica carinata HOM05D000625 ORTHO05D000467 7.5e-09 64.3 110 35.5
CSS0010304 Camellia sinensis var. sinensis HOM05D000625 ORTHO05D000467 7.5e-09 64.3 112 37.5
Thhalv10024218m.g Eutrema salsugineum HOM05D000625 ORTHO05D000467 9.8e-09 63.9 111 36.0
Carub.0007s0381 Capsella rubella HOM05D000625 ORTHO05D000467 1.3e-08 63.5 109 35.8
Medtr8g077150 Medicago truncatula HOM05D000625 ORTHO05D000467 1.3e-08 63.5 111 38.7
vmacro12740 Vaccinium macrocarpon HOM05D000625 ORTHO05D000467 1.3e-08 63.5 112 40.2
Actinidia36573 Actinidia chinensis HOM05D000625 ORTHO05D000467 1.7e-08 63.2 112 38.4
ClCG01G019710 Citrullus lanatus HOM05D000625 ORTHO05D000467 1.7e-08 63.2 112 36.6
Nitab4.5_0007490g0010 Nicotiana tabacum HOM05D000625 ORTHO05D000467 1.7e-08 63.2 114 40.4
TAR381G1253 Trochodendron aralioides HOM05D000625 ORTHO05D000467 1.7e-08 63.2 109 35.8
unitig_88.g27755 Utricularia gibba HOM05D000625 ORTHO05D000467 1.7e-08 63.2 99 40.4
Atru.chr3.621 Acer truncatum HOM05D000625 ORTHO05D000467 2.8e-08 62.4 114 37.7
BcaNung00726 Brassica carinata HOM05D000625 ORTHO05D000467 3.7e-08 62.0 92 35.9
CSS0033645 Camellia sinensis var. sinensis HOM05D000625 ORTHO05D000467 3.7e-08 62.0 111 37.8
CSS0045130 Camellia sinensis var. sinensis HOM05D000625 ORTHO05D000467 3.7e-08 62.0 111 37.8
Lsat_1_v5_gn_3_75961 Lactuca sativa HOM05D000625 ORTHO05D000467 3.7e-08 62.0 115 39.1
Nitab4.5_0000178g0290 Nicotiana tabacum HOM05D000625 ORTHO05D000467 3.7e-08 62.0 114 38.6
CsaV3_6G046420 Cucumis sativus L. HOM05D000625 ORTHO05D000467 4.9e-08 61.6 112 36.6
Nn1g04932 Nelumbo nucifera HOM05D000625 ORTHO05D000467 4.9e-08 61.6 97 35.1
Carub.0005s0489 Capsella rubella HOM05D000625 ORTHO05D000467 6.3e-08 61.2 92 39.1
TPR.G24117 Trifolium pratense HOM05D000625 ORTHO05D000467 8.3e-08 60.8 117 35.0
Haze_15065 Corylus avellana HOM05D000625 ORTHO05D010258 1.8e-07 59.7 113 38.1
TAR628G0252 Trochodendron aralioides HOM05D000625 ORTHO05D000467 1.8e-07 59.7 102 36.3
Ca_22292_v3 Cicer arietinum L. HOM05D000625 ORTHO05D000467 3.1e-07 58.9 123 34.1
Ca_22322_v3 Cicer arietinum L. HOM05D000625 ORTHO05D000467 3.1e-07 58.9 123 34.1
Ah.02g125030 Amaranthus hybridus HOM05D000625 ORTHO05D000467 4.1e-07 58.5 116 38.8
arahy.Tifrunner.gnm1.ann1.GIVS0W Arachis hypogaea HOM05D000625 ORTHO05D000467 5.4e-07 58.2 112 36.6
arahy.Tifrunner.gnm1.ann1.9VM2YS Arachis hypogaea HOM05D000625 ORTHO05D000467 9.2e-07 57.4 112 35.7
vmacro21661 Vaccinium macrocarpon HOM05D000625 ORTHO05D000467 1.2e-06 57.0 99 33.3
Actinidia16035 Actinidia chinensis HOM05D000625 ORTHO05D000467 1.6e-06 56.6 93 37.6
Cpa.g.sc6.145 Carica papaya HOM05D000625 ORTHO05D000467 1.6e-06 56.6 112 38.4
HanXRQChr16g0530651 Helianthus annuus HOM05D000625 ORTHO05D000467 1.6e-06 56.6 110 37.3
Peaxi162Scf00366g00623 Petunia axillaris HOM05D000625 ORTHO05D000467 3.5e-06 55.5 121 33.1
ECA246G3280 Erigeron canadensis HOM05D000625 ORTHO05D000467 5.9e-06 54.7 118 34.7
Glyma.01G172200 Glycine max HOM05D000625 ORTHO05D000467 5.9e-06 54.7 119 35.3
Lj2g0024909 Lotus japonicus HOM05D000625 ORTHO05D000467 5.9e-06 54.7 92 39.1
Hund13995 Selenicereus undatus HOM05D000625 ORTHO05D000467 5.9e-06 54.7 83 42.2
CSS0035707 Camellia sinensis var. sinensis HOM05D000625 ORTHO05D000467 7.7e-06 54.3 96 35.4
CSS0045735 Camellia sinensis var. sinensis HOM05D000625 ORTHO05D000467 7.7e-06 54.3 96 35.4
AUR62004083 Chenopodium quinoa HOM05D000625 ORTHO05D000467 7.7e-06 54.3 109 37.6
Phvul.003G255200 Phaseolus vulgaris HOM05D000625 ORTHO05D000467 7.7e-06 54.3 114 33.3


User provided reference genes

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