Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold47G17642 Striga asiatica HOM05D000034 ORTHO05D000037 9.3e-68 260.0 124 100.0
MSTRG.3282 Avicennia marina HOM05D000034 ORTHO05D001902 6.3e-24 114.4 86 65.1
Migut.L00099 Erythranthe guttata HOM05D000034 ORTHO05D000037 2.7e-22 109.0 86 61.6
Peaxi162Scf00353g00736 Petunia axillaris HOM05D000034 ORTHO05D000037 1.7e-21 106.3 184 36.4
CSS0044788 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.9e-21 105.5 86 60.5
Oeu035072.1 Olea europaea HOM05D000034 ORTHO05D000037 5.0e-21 104.8 86 61.6
Dinv01664 Davidia involucrata HOM05D000034 ORTHO05D000037 6.5e-21 104.4 86 60.5
Cpa.g.sc34.138 Carica papaya HOM05D000034 ORTHO05D000037 1.9e-20 102.8 86 61.6
Atru.chr3.1441 Acer truncatum HOM05D000034 ORTHO05D000037 5.5e-20 101.3 86 55.8
Nitab4.5_0006957g0010 Nicotiana tabacum HOM05D000034 ORTHO05D000037 5.5e-20 101.3 86 58.1
Nitab4.5_0000496g0280 Nicotiana tabacum HOM05D000034 ORTHO05D000037 1.2e-19 100.1 86 57.0
MD00G1159500 Malus domestica HOM05D000034 ORTHO05D000037 4.7e-19 98.2 87 59.8
Sabra19G0011500 Salix brachista HOM05D000034 ORTHO05D003147 1.0e-18 97.1 86 59.3
Hma1.2p1_0296F.1_g116800 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.4e-18 96.7 87 58.6
Sabra19G0001300 Salix brachista HOM05D000034 ORTHO05D000037 1.4e-18 96.7 86 59.3
Haze_19363 Corylus avellana HOM05D000034 ORTHO05D000037 2.3e-18 95.9 86 57.0
Rhsim13G0211600 Rhododendron simsii HOM05D000034 ORTHO05D000037 4.0e-18 95.1 88 58.0
RcHm_v2.0_Chr1g0313091 Rosa chinensis HOM05D000034 ORTHO05D000037 4.0e-18 95.1 87 58.6
Sopen05g034720 Solanum pennellii HOM05D000034 ORTHO05D000037 4.0e-18 95.1 86 54.7
Duzib187G1082 Durio zibethinus HOM05D000034 ORTHO05D000037 5.2e-18 94.7 86 58.1
CANSAT54G1207 Cannabis sativa HOM05D000034 ORTHO05D000037 8.8e-18 94.0 86 55.8
Prupe.7G000100 Prunus persica HOM05D000034 ORTHO05D000037 1.2e-17 93.6 87 58.6
TPR.G40358 Trifolium pratense HOM05D000034 ORTHO05D000037 1.2e-17 93.6 86 54.7
arahy.Tifrunner.gnm1.ann1.Q9J6SI Arachis hypogaea HOM05D000034 ORTHO05D000037 2.6e-17 92.4 86 54.7
arahy.Tifrunner.gnm1.ann1.TW33UK Arachis hypogaea HOM05D000034 ORTHO05D000037 2.6e-17 92.4 86 54.7
FvH4_4g05911 Fragaria vesca HOM05D000034 ORTHO05D000037 2.6e-17 92.4 87 58.6
TWI79G1493 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 3.4e-17 92.0 86 55.8
Ca_25252_v3 Cicer arietinum L. HOM05D000034 ORTHO05D000037 2.8e-16 89.0 86 53.5
EL10Ac4g09713 Beta vulgaris HOM05D000034 ORTHO05D000037 4.5e-14 81.6 83 49.4
QL10p037558 Quercus lobata HOM05D000034 ORTHO05D000037 4.5e-14 81.6 86 52.3
AUR62000585 Chenopodium quinoa HOM05D000034 ORTHO05D000037 5.9e-14 81.3 83 49.4
AUR62006942 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.0e-13 80.5 83 48.2
Lj2g0010408 Lotus japonicus HOM05D000034 ORTHO05D000037 1.9e-12 76.3 62 59.7
PSO170G3831 Papaver somniferum HOM05D000034 ORTHO05D000037 5.5e-12 74.7 62 54.8
PSO017G5821 Papaver somniferum HOM05D000034 ORTHO05D000037 9.4e-12 73.9 62 54.8
Psat1g113840 Pisum sativum HOM05D000034 ORTHO05D000037 2.1e-11 72.8 87 49.4
Sp6g34460 Schrenkiella parvula HOM05D000034 ORTHO05D000037 1.8e-10 69.7 82 45.1
PGR119G0632 Punica granatum HOM05D000034 ORTHO05D000037 9.8e-09 63.9 60 53.3
BcaB08g37260 Brassica carinata HOM05D000034 ORTHO05D000037 2.2e-08 62.8 58 51.7
C09p68570 Brassica napus HOM05D000034 ORTHO05D000037 2.2e-08 62.8 58 51.7
BolC9t59599H Brassica oleracea HOM05D003684 ORTHO05D004428 2.2e-08 62.8 58 51.7
Aa31LG3G18090 Aethionema arabicum HOM05D000034 ORTHO05D000037 4.9e-08 61.6 81 43.2
A10p28310 Brassica napus HOM05D000034 ORTHO05D000037 6.3e-08 61.2 58 51.7
THA.LOC104800545 Tarenaya hassleriana HOM05D000034 ORTHO05D000037 3.1e-07 58.9 85 40.0


User provided reference genes

Program Settings