Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold47G17637 Striga asiatica HOM05D005729 ORTHO05D007026 3.7e-90 335.1 204 100.0
Oeu003419.1 Olea europaea HOM05D005729 ORTHO05D007026 1.2e-64 250.4 206 77.7
SalBow7G1413 Salvia bowleyana HOM05D005729 ORTHO05D007026 1.9e-62 243.0 194 75.8
Actinidia19554 Actinidia chinensis HOM05D005729 ORTHO05D007026 1.4e-57 226.9 206 68.0
Cpa.g.sc9.286 Carica papaya HOM05D005729 ORTHO05D007026 1.2e-56 223.8 199 67.8
Dinv33283 Davidia involucrata HOM05D005729 ORTHO05D007026 7.9e-56 221.1 199 67.8
Migut.K01484 Erythranthe guttata HOM05D005729 ORTHO05D007026 3.3e-54 215.7 189 74.6
unitig_92.g28207 Utricularia gibba HOM05D005729 ORTHO05D007026 5.6e-54 214.9 209 68.4
CiPaw.03G002600 Carya illinoinensis HOM05D005729 ORTHO05D007026 1.6e-53 213.4 193 70.5
ClCG01G007820 Citrullus lanatus HOM05D005729 ORTHO05D007026 1.4e-52 210.3 193 63.2
Dinv25620 Davidia involucrata HOM05D000884 ORTHO05D002127 2.4e-52 209.5 190 74.7
TPR.G10334 Trifolium pratense HOM05D005729 ORTHO05D007026 4.0e-52 208.8 194 66.5
Duzib187G1006 Durio zibethinus HOM05D005729 ORTHO05D007026 6.9e-52 208.0 198 65.7
Prupe.2G125900 Prunus persica HOM05D005729 ORTHO05D007026 6.9e-52 208.0 195 68.2
Manes.04G092600 Manihot esculenta HOM05D005729 ORTHO05D007026 1.2e-51 207.2 199 60.3
DCAR_014472 Daucus carota HOM05D005729 ORTHO05D007026 3.4e-51 205.7 198 69.7
MELO3C005111.2 Cucumis melo HOM05D005729 ORTHO05D007026 5.8e-51 204.9 193 64.2
CsaV3_5G024890 Cucumis sativus L. HOM05D005729 ORTHO05D007026 5.8e-51 204.9 193 64.2
Sed0006238 Sechium edule HOM05D005729 ORTHO05D007026 7.6e-51 204.5 193 64.8
MD05G1139400 Malus domestica HOM05D005729 ORTHO05D007026 2.9e-50 202.6 201 64.2
Lj1g0015500 Lotus japonicus HOM05D005729 ORTHO05D007026 3.8e-50 202.2 196 67.9
THA.LOC104815860 Tarenaya hassleriana HOM05D005729 ORTHO05D007026 3.8e-50 202.2 199 66.3
MD00G1041400 Malus domestica HOM05D005729 ORTHO05D007026 4.9e-50 201.8 201 62.2
CSS0020873 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 6.5e-50 201.4 195 65.6
CANSAT64G2014 Cannabis sativa HOM05D005729 ORTHO05D007026 8.4e-50 201.1 201 64.2
Sed0018343 Sechium edule HOM05D005729 ORTHO05D007026 8.4e-50 201.1 198 63.6
Solyc02g094490.4 Solanum lycopersicum HOM05D005729 ORTHO05D007026 1.9e-49 199.9 198 61.6
CAN.G473.157 Capsicum annuum HOM05D005729 ORTHO05D007026 2.5e-49 199.5 188 72.9
THA.LOC104826200 Tarenaya hassleriana HOM05D005729 ORTHO05D007026 3.2e-49 199.1 188 70.2
Ah.02g128910 Amaranthus hybridus HOM05D005729 ORTHO05D007026 9.3e-49 197.6 194 68.6
Aqoxy5G03167 Aquilegia oxysepala HOM05D005729 ORTHO05D007026 9.3e-49 197.6 193 67.4
EL10As7g23751 Beta vulgaris HOM05D005729 ORTHO05D007026 9.3e-49 197.6 198 67.2
PGR142G3540 Punica granatum HOM05D005729 ORTHO05D007026 9.3e-49 197.6 191 59.7
Lsat_1_v5_gn_2_94961 Lactuca sativa HOM05D005729 ORTHO05D007026 1.6e-48 196.8 188 71.8
Medtr7g083930 Medicago truncatula HOM05D005729 ORTHO05D007026 1.6e-48 196.8 198 63.1
Potri.002G237000 Populus trichocarpa HOM05D005729 ORTHO05D007026 1.6e-48 196.8 204 69.1
Glyma.19G102200 Glycine max HOM05D005729 ORTHO05D007026 2.1e-48 196.4 194 63.4
Ca_08134_v3 Cicer arietinum L. HOM05D005729 ORTHO05D007026 3.5e-48 195.7 193 67.9
Thecc.04G047000 Theobroma cacao HOM05D005729 ORTHO05D007026 3.5e-48 195.7 195 65.1
HanXRQChr14g0451391 Helianthus annuus HOM05D005729 ORTHO05D007026 6.0e-48 194.9 196 68.4
EL10Ac6g13393 Beta vulgaris HOM05D005729 ORTHO05D007026 1.0e-47 194.1 193 67.9
Thhalv10017252m.g Eutrema salsugineum HOM05D005729 ORTHO05D007026 1.0e-47 194.1 206 62.1
Glyma.16G049200 Glycine max HOM05D005729 ORTHO05D007026 1.3e-47 193.7 195 63.1
Lju41C60T1 Lonicera japonica HOM05D005729 ORTHO05D007026 2.3e-47 193.0 205 68.3
Aqoxy5G03273 Aquilegia oxysepala HOM05D005729 ORTHO05D007026 3.0e-47 192.6 195 63.6
MBI07_g07331_MAGBIO Magnolia biondii HOM05D005729 ORTHO05D007026 3.0e-47 192.6 198 66.7
Peaxi162Scf00420g00083 Petunia axillaris HOM05D005729 ORTHO05D007026 3.0e-47 192.6 199 68.3
Ciclev10016760m.g Citrus clementina HOM05D005729 ORTHO05D007026 5.1e-47 191.8 202 63.9
Sopen02g039170 Solanum pennellii HOM05D005729 ORTHO05D007026 5.1e-47 191.8 198 66.2
Sp4g13900 Schrenkiella parvula HOM05D005729 ORTHO05D007026 8.7e-47 191.0 207 65.2
PGSC0003DMG400035897 Solanum tuberosum HOM05D005729 ORTHO05D007026 8.7e-47 191.0 197 67.0
Psat3g093680 Pisum sativum HOM05D005729 ORTHO05D007026 1.5e-46 190.3 196 61.7
Aa31LG5G5560 Aethionema arabicum HOM05D005729 ORTHO05D007026 1.9e-46 189.9 203 66.0
arahy.Tifrunner.gnm1.ann1.33W0XH Arachis hypogaea HOM05D005729 ORTHO05D007026 2.5e-46 189.5 199 61.3
Nn4g22156 Nelumbo nucifera HOM05D005729 ORTHO05D007026 2.5e-46 189.5 186 64.0
TWI34G0826 Tripterygium wilfordii HOM05D005729 ORTHO05D007026 2.5e-46 189.5 196 67.3
Phvul.001G085400 Phaseolus vulgaris HOM05D005729 ORTHO05D007026 5.7e-46 188.3 193 60.1
Potri.014G145600 Populus trichocarpa HOM05D005729 ORTHO05D007026 7.4e-46 188.0 202 56.4
Gohir.D07G239700 Gossypium hirsutum HOM05D005729 ORTHO05D007026 2.1e-45 186.4 194 65.5
ECA238G1999 Erigeron canadensis HOM05D005729 ORTHO05D007026 2.8e-45 186.0 194 67.5
Duzib264G0852 Durio zibethinus HOM05D005729 ORTHO05D007026 3.7e-45 185.7 203 60.1
TAR371G0439 Trochodendron aralioides HOM05D005729 ORTHO05D007026 2.4e-44 183.0 194 61.3
FAN21G1155 Fragaria x ananassa HOM05D005729 ORTHO05D007026 3.1e-44 182.6 199 59.3
QL11p027744 Quercus lobata HOM05D005729 ORTHO05D007026 3.1e-44 182.6 201 60.7
Gorai.001G275800 Gossypium raimondii HOM05D005729 ORTHO05D007026 4.1e-44 182.2 194 64.4
FAN22G1114 Fragaria x ananassa HOM05D005729 ORTHO05D007026 6.9e-44 181.4 199 55.8
Lalb_Chr22g0359961 Lupinus albus HOM05D005729 ORTHO05D007026 6.9e-44 181.4 197 60.4
RcHm_v2.0_Chr5g0049531 Rosa chinensis HOM05D005729 ORTHO05D007026 6.9e-44 181.4 198 56.6
FvH4_4g34010 Fragaria vesca HOM05D005729 ORTHO05D007026 1.5e-43 180.3 199 55.3
Carub.0004s1273 Capsella rubella HOM05D005729 ORTHO05D007026 2.0e-43 179.9 203 63.1
FAN12G1178 Fragaria x ananassa HOM05D005729 ORTHO05D007026 2.0e-43 179.9 199 55.3
FAN17G0918 Fragaria x ananassa HOM05D005729 ORTHO05D007026 3.4e-43 179.1 199 56.3
CARHR125040 Cardamine hirsuta HOM05D005729 ORTHO05D007026 1.3e-42 177.2 197 58.9
HPP92_011631 Vanilla planifolia HOM05D005729 ORTHO05D007026 1.3e-42 177.2 200 64.5
BcaC02g07982 Brassica carinata HOM05D005729 ORTHO05D007026 2.2e-42 176.4 203 60.6
C04p61110 Brassica napus HOM05D005729 ORTHO05D007026 2.2e-42 176.4 203 60.6
BolC4t27596H Brassica oleracea HOM05D005729 ORTHO05D007026 2.2e-42 176.4 203 60.6
TAR629G2671 Trochodendron aralioides HOM05D005729 ORTHO05D007026 5.0e-42 175.3 194 64.9
Eucgr.G01937 Eucalyptus grandis HOM05D005729 ORTHO05D007026 2.5e-41 172.9 199 56.8
BcaB01g04046 Brassica carinata HOM05D005729 ORTHO05D007026 4.2e-41 172.2 203 62.1
Nitab4.5_0002172g0090 Nicotiana tabacum HOM05D005729 ORTHO05D007026 4.2e-41 172.2 199 62.3
A04p24280 Brassica napus HOM05D005729 ORTHO05D007026 5.5e-41 171.8 196 60.7
BraA04t17947Z Brassica rapa HOM05D005729 ORTHO05D007026 5.5e-41 171.8 196 60.7
FAN25G1272 Fragaria x ananassa HOM05D005729 ORTHO05D007026 5.5e-41 171.8 199 57.3
Atru.chr6.2652 Acer truncatum HOM05D005729 ORTHO05D007026 7.2e-41 171.4 205 64.9
TAR628G1373 Trochodendron aralioides HOM05D005729 ORTHO05D007026 7.2e-41 171.4 194 64.4
AL4G26660 Arabidopsis lyrata HOM05D005729 ORTHO05D007026 9.3e-41 171.0 204 59.8
Sc07g0003710 Simmondsia chinensis HOM05D005729 ORTHO05D007026 1.2e-40 170.6 190 64.7
Gohir.A07G232500 Gossypium hirsutum HOM05D005729 ORTHO05D007026 3.6e-40 169.1 194 61.3
AT2G31410 Arabidopsis thaliana HOM05D005729 ORTHO05D007026 6.1e-40 168.3 205 60.0
BraA03t11026Z Brassica rapa HOM05D005729 ORTHO05D007026 1.3e-39 167.2 203 61.6
Cfa007167 Carpinus fangiana HOM05D005729 ORTHO05D007026 1.8e-39 166.8 199 63.3
A03p17590 Brassica napus HOM05D005729 ORTHO05D007026 2.3e-39 166.4 194 63.9
Cfa016824 Carpinus fangiana HOM05D005729 ORTHO05D007026 5.1e-39 165.2 199 63.8
Haze_19869 Corylus avellana HOM05D005729 ORTHO05D007026 1.5e-38 163.7 200 63.5
C03p20700 Brassica napus HOM05D005729 ORTHO05D007026 1.9e-38 163.3 193 63.2
BolC3t14453H Brassica oleracea HOM05D005729 ORTHO05D007026 1.9e-38 163.3 193 63.2
ATR0559G324 Amborella trichopoda HOM05D005729 ORTHO05D007026 5.7e-38 161.8 209 52.2
Haze_14943 Corylus avellana HOM05D005729 ORTHO05D007026 7.4e-38 161.4 199 62.8
Zm00001eb183750 Zea mays HOM05D005729 ORTHO05D007026 7.4e-38 161.4 201 50.7
CSS0008758 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 1.8e-36 156.8 135 70.4
AUR62036639 Chenopodium quinoa HOM05D005729 ORTHO05D007026 1.2e-35 154.1 197 59.4
Nitab4.5_0000519g0260 Nicotiana tabacum HOM05D005729 ORTHO05D007026 5.9e-35 151.8 157 69.4
CSS0019060 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 1.0e-34 151.0 135 68.9
PSO478G2072 Papaver somniferum HOM05D005729 ORTHO05D007026 3.2e-33 146.0 193 47.2
Zm00001eb246070 Zea mays HOM05D005729 ORTHO05D007026 4.2e-33 145.6 201 45.3
Os02g0595400 Oryza sativa ssp. japonica HOM05D005729 ORTHO05D007026 1.2e-32 144.1 201 51.7
PSO017G0758 Papaver somniferum HOM05D005729 ORTHO05D007026 2.7e-32 142.9 193 57.5
Cc07_g01230 Coffea canephora HOM05D005729 ORTHO05D007026 1.0e-31 141.0 202 59.4
Rhsim08G0039300 Rhododendron simsii HOM05D005729 ORTHO05D007026 1.8e-31 140.2 143 65.0
RcHm_v2.0_Chr6g0252241 Rosa chinensis HOM05D005729 ORTHO05D007026 5.7e-30 135.2 169 49.7
Pp3c11_25830 Physcomitrium patens HOM05D005729 ORTHO05D007026 2.2e-29 133.3 188 47.3
RcHm_v2.0_Chr7g0240621 Rosa chinensis HOM05D005729 ORTHO05D007026 1.8e-28 130.2 169 48.5
Sabra02G0180500 Salix brachista HOM05D005729 ORTHO05D007026 3.4e-27 125.9 186 46.2
RcHm_v2.0_Chr2g0115461 Rosa chinensis HOM05D005729 ORTHO05D007026 4.5e-27 125.6 169 47.3
COL.COLO4_13365 Corchorus olitorius HOM05D005729 ORTHO05D007026 5.9e-27 125.2 118 61.9
AUR62034632 Chenopodium quinoa HOM05D000604 ORTHO05D004512 6.5e-26 121.7 120 56.7
CDE06G2057 Ceratophyllum demersum HOM05D005729 ORTHO05D007026 1.4e-25 120.6 124 59.7
RcHm_v2.0_Chr5g0057561 Rosa chinensis HOM05D005729 ORTHO05D007026 4.2e-25 119.0 160 53.1
RcHm_v2.0_Chr2g0117931 Rosa chinensis HOM05D005729 ORTHO05D007026 7.4e-22 108.2 131 51.9
RcHm_v2.0_Chr6g0272931 Rosa chinensis HOM05D005729 ORTHO05D007026 1.3e-21 107.5 130 52.3
RcHm_v2.0_Chr1g0315821 Rosa chinensis HOM05D005729 ORTHO05D007026 3.7e-21 105.9 130 50.8
Mapoly0127s0012 Marchantia polymorpha HOM05D005729 ORTHO05D007026 6.3e-21 105.1 188 51.1
RcHm_v2.0_Chr5g0026441 Rosa chinensis HOM05D005729 ORTHO05D007026 8.2e-21 104.8 130 50.8
Haze_19868 Corylus avellana HOM05D005729 ORTHO05D007026 3.5e-19 99.4 99 59.6
Hma1.2p1_0033F.1_g021130 Hydrangea macrophylla HOM05D005729 ORTHO05D007026 2.9e-18 96.3 104 73.1
RcHm_v2.0_Chr6g0295141 Rosa chinensis HOM05D005729 ORTHO05D007026 3.2e-17 92.8 111 58.6
Psat4g074560 Pisum sativum HOM05D005729 ORTHO05D007026 4.7e-16 89.0 128 43.8
Sc14g0008230 Simmondsia chinensis HOM05D005729 ORTHO05D007026 4.7e-16 89.0 114 49.1
Atru.chr5.655 Acer truncatum HOM05D000598 ORTHO05D000480 4.8e-13 79.0 143 56.6
Solyc03g083260.1 Solanum lycopersicum HOM05D005729 ORTHO05D007026 1.4e-12 77.4 90 50.0
Psat4g074600 Pisum sativum HOM05D005729 ORTHO05D007026 6.5e-10 68.6 85 47.1
CBR_g4589 Chara braunii HOM05D005729 ORTHO05D007026 1.9e-09 67.0 178 41.6
EL10Ac1g01380 Beta vulgaris HOM05D005729 ORTHO05D007026 2.5e-09 66.6 69 55.1
Atru.chr6.2684 Acer truncatum HOM05D005729 ORTHO05D007026 5.2e-07 58.9 46 67.4


User provided reference genes

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