Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold47G17597 Striga asiatica HOM05D006878 ORTHO05D008579 9.7e-144 513.5 258 100.0
Migut.K01467 Erythranthe guttata HOM05D006878 ORTHO05D008579 2.8e-106 389.0 248 77.4
SalBow7G1076 Salvia bowleyana HOM05D006878 ORTHO05D008579 2.6e-104 382.5 261 75.9
MSTRG.3257 Avicennia marina HOM05D006878 ORTHO05D008579 2.0e-101 372.9 246 77.2
Oeu005107.2 Olea europaea HOM05D006878 ORTHO05D008579 7.3e-99 364.4 289 69.6
Dinv33333 Davidia involucrata HOM05D006878 ORTHO05D008579 3.4e-96 355.5 245 75.1
Rhsim08G0042400 Rhododendron simsii HOM05D006878 ORTHO05D008579 1.7e-95 353.2 247 73.3
Peaxi162Scf00420g00554 Petunia axillaris HOM05D006878 ORTHO05D008579 1.2e-93 347.1 249 72.3
Nitab4.5_0002050g0060 Nicotiana tabacum HOM05D006878 ORTHO05D008579 2.7e-93 345.9 248 71.4
GSVIVG01033083001 Vitis vinifera HOM05D006878 ORTHO05D008579 3.5e-93 345.5 246 72.4
Nitab4.5_0009844g0010 Nicotiana tabacum HOM05D006878 ORTHO05D008579 1.0e-92 344.0 248 71.0
CAN.G473.102 Capsicum annuum HOM05D006878 ORTHO05D008579 1.3e-92 343.6 247 72.5
Actinidia05902 Actinidia chinensis HOM05D006878 ORTHO05D008579 2.3e-92 342.8 247 72.9
MD17G1000600 Malus domestica HOM05D006878 ORTHO05D008579 2.3e-92 342.8 247 71.7
TWI34G0743 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 3.0e-92 342.4 248 71.0
CSS0033487 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 1.1e-91 340.5 245 71.8
TWI34G1534 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 1.9e-91 339.7 248 70.6
Prupe.3G307100 Prunus persica HOM05D006878 ORTHO05D008579 2.5e-91 339.3 247 72.1
PGSC0003DMG400020210 Solanum tuberosum HOM05D006878 ORTHO05D008579 9.5e-91 337.4 248 70.6
CSS0001354 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 1.2e-90 337.0 247 70.9
Cc07_g00890 Coffea canephora HOM05D006878 ORTHO05D008579 1.2e-90 337.0 248 69.8
HanXRQChr14g0450611 Helianthus annuus HOM05D006878 ORTHO05D008579 1.2e-90 337.0 241 72.6
CsaV3_2G034120 Cucumis sativus L. HOM05D006878 ORTHO05D008579 1.6e-90 336.7 244 70.5
MD09G1010100 Malus domestica HOM05D006878 ORTHO05D008579 2.1e-90 336.3 247 70.9
Sopen02g038800 Solanum pennellii HOM05D006878 ORTHO05D008579 2.8e-90 335.9 248 70.6
Solyc02g094170.3 Solanum lycopersicum HOM05D006878 ORTHO05D008579 4.7e-90 335.1 248 70.2
CANSAT64G0355 Cannabis sativa HOM05D006878 ORTHO05D008579 6.2e-90 334.7 249 70.7
Cfa007222 Carpinus fangiana HOM05D006878 ORTHO05D008579 8.1e-90 334.3 248 70.2
COL.COLO4_13265 Corchorus olitorius HOM05D006878 ORTHO05D008579 1.4e-89 333.6 243 71.2
vmacro18351 Vaccinium macrocarpon HOM05D006878 ORTHO05D008579 2.3e-89 332.8 258 68.6
MELO3C008189.2 Cucumis melo HOM05D006878 ORTHO05D008579 3.1e-89 332.4 244 69.7
Duzib147G1327 Durio zibethinus HOM05D006878 ORTHO05D008579 3.1e-89 332.4 249 69.1
Manes.15G161800 Manihot esculenta HOM05D006878 ORTHO05D008579 4.0e-89 332.0 245 69.8
ClCG11G007130 Citrullus lanatus HOM05D006878 ORTHO05D008579 6.8e-89 331.3 245 69.4
DCAR_015107 Daucus carota HOM05D006878 ORTHO05D008579 6.8e-89 331.3 247 70.0
Ciclev10016370m.g Citrus clementina HOM05D006878 ORTHO05D008579 4.4e-88 328.6 237 73.0
Eucgr.I01641 Eucalyptus grandis HOM05D006878 ORTHO05D008579 4.4e-88 328.6 243 69.1
Thecc.04G038000 Theobroma cacao HOM05D006878 ORTHO05D008579 9.9e-88 327.4 235 71.5
Sed0002550 Sechium edule HOM05D006878 ORTHO05D008579 1.3e-87 327.0 244 68.9
QL02p071231 Quercus lobata HOM05D006878 ORTHO05D008579 1.7e-87 326.6 283 63.6
Sabra16G0210700 Salix brachista HOM05D006878 ORTHO05D008579 2.9e-87 325.9 249 70.3
TAR629G1805 Trochodendron aralioides HOM05D006878 ORTHO05D008579 2.9e-87 325.9 245 70.6
Lsat_1_v5_gn_2_93161 Lactuca sativa HOM05D006878 ORTHO05D008579 4.9e-87 325.1 236 70.3
Gohir.D07G235800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 8.4e-87 324.3 243 70.0
Gorai.001G271700 Gossypium raimondii HOM05D006878 ORTHO05D008579 8.4e-87 324.3 243 70.0
TAR629G1038 Trochodendron aralioides HOM05D006878 ORTHO05D008579 8.4e-87 324.3 246 69.9
Atru.chr6.2581 Acer truncatum HOM05D006878 ORTHO05D008579 1.1e-86 323.9 246 69.9
Gohir.A07G228800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 1.4e-86 323.6 243 70.4
Aqoxy5G03335 Aquilegia oxysepala HOM05D006878 ORTHO05D008579 5.4e-86 321.6 251 69.3
PGR142G3785 Punica granatum HOM05D006878 ORTHO05D008579 7.1e-86 321.2 245 67.8
Potri.001G329300 Populus trichocarpa HOM05D006878 ORTHO05D008579 1.2e-85 320.5 248 68.1
TAR371G0275 Trochodendron aralioides HOM05D006878 ORTHO05D008579 1.2e-85 320.5 234 71.8
Psat3g178400 Pisum sativum HOM05D006878 ORTHO05D008579 1.0e-84 317.4 251 67.7
TPR.G38297 Trifolium pratense HOM05D006878 ORTHO05D008579 1.3e-84 317.0 241 69.7
Nn3g16452 Nelumbo nucifera HOM05D006878 ORTHO05D008579 8.6e-84 314.3 230 71.3
Glyma.16G056000 Glycine max HOM05D006878 ORTHO05D008579 3.3e-83 312.4 245 68.2
RcHm_v2.0_Chr2g0175731 Rosa chinensis HOM05D006878 ORTHO05D008579 1.6e-82 310.1 283 61.1
FAN09G4559 Fragaria x ananassa HOM05D006878 ORTHO05D008579 3.6e-82 308.9 283 61.8
arahy.Tifrunner.gnm1.ann1.G39TQA Arachis hypogaea HOM05D006878 ORTHO05D008579 1.8e-81 306.6 245 65.3
Phvul.001G093000 Phaseolus vulgaris HOM05D006878 ORTHO05D008579 1.8e-81 306.6 244 66.8
Aa31LG11G14940 Aethionema arabicum HOM05D006878 ORTHO05D008579 4.0e-81 305.4 248 62.5
arahy.Tifrunner.gnm1.ann1.1N9EHH Arachis hypogaea HOM05D006878 ORTHO05D008579 4.0e-81 305.4 245 65.3
VMungo1383G2452 Vigna mungo HOM05D006878 ORTHO05D008579 5.2e-81 305.1 245 64.9
FvH4_6g53600 Fragaria vesca HOM05D006878 ORTHO05D008579 8.9e-81 304.3 282 60.3
FAN14G5463 Fragaria x ananassa HOM05D006878 ORTHO05D008579 3.4e-80 302.4 282 60.3
AUR62029405 Chenopodium quinoa HOM05D006878 ORTHO05D008579 5.8e-80 301.6 256 60.9
Carub.0006s1234 Capsella rubella HOM05D006878 ORTHO05D008579 7.6e-80 301.2 256 62.1
AUR62003439 Chenopodium quinoa HOM05D006878 ORTHO05D008579 7.6e-80 301.2 249 61.8
Sc03g0006490 Simmondsia chinensis HOM05D006878 ORTHO05D008579 1.3e-79 300.4 248 63.3
Thhalv10014409m.g Eutrema salsugineum HOM05D006878 ORTHO05D008579 2.2e-79 299.7 254 62.2
PSO478G0882 Papaver somniferum HOM05D006878 ORTHO05D008579 3.8e-79 298.9 265 63.0
Ah.02g119990 Amaranthus hybridus HOM05D006878 ORTHO05D008579 4.9e-79 298.5 243 63.0
BcaB01g06341 Brassica carinata HOM05D006878 ORTHO05D008579 1.1e-78 297.4 261 60.5
ECA238G1054 Erigeron canadensis HOM05D006878 ORTHO05D008579 1.1e-78 297.4 276 58.7
AL6G24810 Arabidopsis lyrata HOM05D006878 ORTHO05D008579 1.9e-78 296.6 254 61.8
MBI07_g39449_MAGBIO Magnolia biondii HOM05D006878 ORTHO05D008579 2.4e-78 296.2 234 65.8
Sp6g29870 Schrenkiella parvula HOM05D006878 ORTHO05D008579 2.4e-78 296.2 240 63.8
SpUn0049_0070 Schrenkiella parvula HOM05D006878 ORTHO05D008579 2.4e-78 296.2 240 63.8
A03p06460 Brassica napus HOM05D006878 ORTHO05D008579 4.2e-78 295.4 238 62.6
ATR0561G206 Amborella trichopoda HOM05D006878 ORTHO05D008579 1.6e-77 293.5 266 58.6
Lalb_Chr14g0363461 Lupinus albus HOM05D006878 ORTHO05D008579 3.5e-77 292.4 247 64.4
BcaB01g05305 Brassica carinata HOM05D006878 ORTHO05D008579 4.6e-77 292.0 238 61.3
AT5G14140 Arabidopsis thaliana HOM05D006878 ORTHO05D008579 1.3e-76 290.4 240 62.5
C03p07460 Brassica napus HOM05D006878 ORTHO05D008579 2.3e-76 289.7 239 61.9
BolC3t13247H Brassica oleracea HOM05D006878 ORTHO05D008579 2.3e-76 289.7 239 61.9
THA.LOC104821122 Tarenaya hassleriana HOM05D006878 ORTHO05D008579 1.1e-75 287.3 239 60.3
Os11g0498400 Oryza sativa ssp. japonica HOM05D006878 ORTHO05D008579 1.5e-75 287.0 267 56.2
CiPaw.04G036900 Carya illinoinensis HOM05D006878 ORTHO05D008579 1.9e-75 286.6 219 67.6
Lj1g0011001 Lotus japonicus HOM05D006878 ORTHO05D008579 1.9e-75 286.6 246 64.2
PSO017G0833 Papaver somniferum HOM05D006878 ORTHO05D008579 2.5e-75 286.2 263 62.0
Zm00001eb112900 Zea mays HOM05D006878 ORTHO05D008579 2.5e-75 286.2 288 53.8
CDE05G3687 Ceratophyllum demersum HOM05D000160 ORTHO05D000496 4.0e-73 278.9 222 64.4
CARHR199200 Cardamine hirsuta HOM05D006878 ORTHO05D008579 2.9e-71 272.7 250 56.4
SHI03949 Sapria himalayana HOM05D006878 ORTHO05D008579 4.9e-71 271.9 235 57.9
EL10Ac6g15414 Beta vulgaris HOM05D006878 ORTHO05D008579 2.1e-66 256.5 249 57.0
Medtr7g029090 Medicago truncatula HOM05D006878 ORTHO05D008579 2.8e-66 256.1 187 71.1
Lju41C53T12 Lonicera japonica HOM05D006878 ORTHO05D008579 3.6e-66 255.8 239 60.7
Lalb_Chr22g0360351 Lupinus albus HOM05D006878 ORTHO05D008579 2.3e-60 236.5 179 69.8
Pp3c4_16130 Physcomitrium patens HOM05D006878 ORTHO05D008579 6.7e-52 208.4 256 44.9
SMO367G0946 Selaginella moellendorffii HOM05D006878 ORTHO05D008579 5.7e-51 205.3 222 52.7
Mapoly0041s0098 Marchantia polymorpha HOM05D006878 ORTHO05D008579 1.3e-50 204.1 272 44.5
Cpa.g.sc171.9 Carica papaya HOM05D006878 ORTHO05D008579 5.5e-46 188.7 132 71.2
Haze_14883 Corylus avellana HOM05D006878 ORTHO05D008579 2.2e-42 176.8 257 45.9
HPP92_022669 Vanilla planifolia HOM05D006878 ORTHO05D008579 2.8e-42 176.4 123 68.3
CBR_g26294 Chara braunii HOM05D006878 ORTHO05D008579 1.2e-40 171.0 200 45.0
Ca_22814_v3 Cicer arietinum L. HOM05D006878 ORTHO05D008579 2.2e-39 166.8 257 45.9
Medtr7g029095 Medicago truncatula HOM05D006878 ORTHO05D008579 1.4e-38 164.1 252 43.3
SEGI_11908 Sequoiadendron giganteum HOM05D006878 ORTHO05D008579 2.0e-32 143.7 134 55.2
BraA03t09977Z Brassica rapa HOM05D006878 ORTHO05D008579 1.3e-26 124.4 120 55.0
FAN02G3703 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.8e-25 120.6 151 51.0
PRCOL_00001512 Prasinoderma coloniale HOM05D006878 ORTHO05D008579 1.8e-20 104.0 140 37.1
CDE05G3052 Ceratophyllum demersum HOM05D006878 ORTHO05D008579 3.3e-19 99.8 111 49.5
Medtr7g029065 Medicago truncatula HOM05D004216 ORTHO05D004926 2.4e-17 93.6 108 55.6
FAN23G0458 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.6e-08 64.3 38 81.6
Actinidia36205 Actinidia chinensis HOM05D006878 ORTHO05D008579 1.1e-06 58.2 47 66.0
Pp3c4_16200 Physcomitrium patens HOM05D006878 ORTHO05D008579 1.5e-06 57.8 133 33.1


User provided reference genes

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