Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold47G17596 Striga asiatica HOM05D006526 ORTHO05D008496 1.8e-187 659.1 326 100.0
Migut.K01466 Erythranthe guttata HOM05D006526 ORTHO05D008496 1.6e-130 469.9 319 74.0
SalBow7G1947 Salvia bowleyana HOM05D006526 ORTHO05D008496 1.8e-123 446.4 369 64.2
MSTRG.3258 Avicennia marina HOM05D006526 ORTHO05D008496 9.1e-123 444.1 324 70.1
CAN.G473.100 Capsicum annuum HOM05D006526 ORTHO05D008496 3.6e-119 432.2 323 69.0
Actinidia05903 Actinidia chinensis HOM05D006526 ORTHO05D008496 2.3e-118 429.5 325 68.0
Dinv33336 Davidia involucrata HOM05D006526 ORTHO05D008496 5.7e-117 424.9 358 62.3
Nitab4.5_0002050g0140 Nicotiana tabacum HOM05D006526 ORTHO05D008496 1.3e-116 423.7 314 69.1
Actinidia36203 Actinidia chinensis HOM05D006526 ORTHO05D008496 2.2e-116 422.9 318 68.9
Rhsim10G0006300 Rhododendron simsii HOM05D006526 ORTHO05D008496 3.7e-116 422.2 326 67.2
Solyc02g094150.4 Solanum lycopersicum HOM05D006526 ORTHO05D008496 1.8e-115 419.9 322 67.4
Sopen02g038780 Solanum pennellii HOM05D006526 ORTHO05D008496 3.1e-115 419.1 322 67.1
Hma1.2p1_1278F.1_g272280 Hydrangea macrophylla HOM05D006526 ORTHO05D008496 4.5e-114 415.2 325 66.5
vmacro05958 Vaccinium macrocarpon HOM05D006526 ORTHO05D008496 1.0e-113 414.1 328 65.5
unitig_88.g27695 Utricularia gibba HOM05D006526 ORTHO05D008496 1.3e-113 413.7 317 66.9
Cc07_g00840 Coffea canephora HOM05D006526 ORTHO05D008496 6.6e-113 411.4 325 66.8
Oeu005097.1 Olea europaea HOM05D006526 ORTHO05D008496 1.9e-112 409.8 287 72.1
Potri.001G330100 Populus trichocarpa HOM05D006526 ORTHO05D008496 2.1e-111 406.4 309 67.3
Peaxi162Scf00420g00560 Petunia axillaris HOM05D006526 ORTHO05D008496 8.9e-110 401.0 311 66.9
GSVIVG01033093001 Vitis vinifera HOM05D006526 ORTHO05D008496 1.3e-108 397.1 298 67.1
COL.COLO4_13261 Corchorus olitorius HOM05D006526 ORTHO05D008496 1.4e-107 393.7 320 63.4
Duzib147G1379 Durio zibethinus HOM05D006526 ORTHO05D008496 1.0e-105 387.5 296 65.2
TWI56G1218 Tripterygium wilfordii HOM05D006526 ORTHO05D008496 1.3e-105 387.1 311 63.0
Eucgr.J02351 Eucalyptus grandis HOM05D006526 ORTHO05D008496 3.0e-105 386.0 321 62.0
Lju41C52G13 Lonicera japonica HOM05D002875 ORTHO05D003215 3.0e-105 386.0 339 60.8
Manes.15G161000 Manihot esculenta HOM05D006526 ORTHO05D008496 3.0e-105 386.0 303 64.7
Thecc.04G036000 Theobroma cacao HOM05D006526 ORTHO05D008496 5.0e-105 385.2 302 64.9
Ciclev10015967m.g Citrus clementina HOM05D006526 ORTHO05D008496 8.6e-105 384.4 298 65.4
Lsat_1_v5_gn_2_93080 Lactuca sativa HOM05D006526 ORTHO05D008496 8.6e-105 384.4 319 61.4
CANSAT64G1234 Cannabis sativa HOM05D006526 ORTHO05D008496 5.6e-104 381.7 297 65.3
CiPaw.03G055600 Carya illinoinensis HOM05D006526 ORTHO05D008496 5.6e-104 381.7 320 63.1
MELO3C014888.2 Cucumis melo HOM05D006526 ORTHO05D008496 2.8e-103 379.4 306 63.7
Gohir.D09G036900 Gossypium hirsutum HOM05D006526 ORTHO05D008496 1.4e-102 377.1 287 66.2
PGR042G1209 Punica granatum HOM05D006526 ORTHO05D008496 1.8e-102 376.7 281 66.2
CsaV3_3G027000 Cucumis sativus L. HOM05D006526 ORTHO05D008496 2.3e-102 376.3 306 62.7
THA.LOC104821121 Tarenaya hassleriana HOM05D006526 ORTHO05D008496 4.0e-102 375.6 293 64.8
HanXRQChr14g0450751 Helianthus annuus HOM05D006526 ORTHO05D008496 6.8e-102 374.8 323 59.1
Nn4g22325 Nelumbo nucifera HOM05D006526 ORTHO05D008496 1.2e-101 374.0 323 61.9
Cpa.g.sc171.15 Carica papaya HOM05D006526 ORTHO05D008496 1.5e-101 373.6 285 65.6
Gorai.006G042000 Gossypium raimondii HOM05D006526 ORTHO05D008496 1.5e-101 373.6 287 65.9
Lalb_Chr14g0363401 Lupinus albus HOM05D006526 ORTHO05D008496 2.0e-101 373.2 278 66.2
A01p25030 Brassica napus HOM05D006526 ORTHO05D008496 5.8e-101 371.7 287 63.4
RcHm_v2.0_Chr2g0175561 Rosa chinensis HOM05D006526 ORTHO05D008496 5.8e-101 371.7 330 60.9
BraA01t02414Z Brassica rapa HOM05D006526 ORTHO05D008496 9.8e-101 370.9 287 63.1
Aa31LG5G11040 Aethionema arabicum HOM05D006526 ORTHO05D008496 2.2e-100 369.8 306 61.1
BcaB05g22967 Brassica carinata HOM05D006526 ORTHO05D008496 2.2e-100 369.8 287 63.4
C01p31260 Brassica napus HOM05D006526 ORTHO05D008496 2.9e-100 369.4 287 63.1
Prupe.3G306300 Prunus persica HOM05D006526 ORTHO05D008496 2.9e-100 369.4 327 60.2
BcaC09g49919 Brassica carinata HOM05D006526 ORTHO05D008496 1.1e-99 367.5 287 62.7
BolC1t03065H Brassica oleracea HOM05D006526 ORTHO05D008496 1.1e-99 367.5 287 62.7
Nitab4.5_0010204g0040 Nicotiana tabacum HOM05D006526 ORTHO05D008496 1.4e-99 367.1 297 65.3
Aqoxy3G01551 Aquilegia oxysepala HOM05D006526 ORTHO05D008496 2.4e-99 366.3 276 66.3
Sabra16G0211400 Salix brachista HOM05D006526 ORTHO05D008496 2.4e-99 366.3 309 61.5
ClCG05G013530 Citrullus lanatus HOM05D006526 ORTHO05D008496 3.2e-99 365.9 314 62.1
FvH4_6g53521 Fragaria vesca HOM05D006526 ORTHO05D008496 3.2e-99 365.9 306 62.1
Sp3g00170 Schrenkiella parvula HOM05D006526 ORTHO05D008496 4.1e-99 365.5 288 62.2
AT3G01920 Arabidopsis thaliana HOM05D006526 ORTHO05D008496 7.0e-99 364.8 315 59.4
Carub.0003s0016 Capsella rubella HOM05D006526 ORTHO05D008496 2.7e-98 362.8 279 63.8
MD09G1010800 Malus domestica HOM05D006526 ORTHO05D008496 4.6e-98 362.1 312 60.3
Cfa007227 Carpinus fangiana HOM05D006526 ORTHO05D008496 1.7e-97 360.1 318 60.1
ECA238G1207 Erigeron canadensis HOM05D006526 ORTHO05D008496 2.3e-97 359.8 312 57.7
AL3G10210 Arabidopsis lyrata HOM05D006526 ORTHO05D008496 5.0e-97 358.6 290 62.8
ATR0561G126 Amborella trichopoda HOM05D006526 ORTHO05D008496 6.6e-97 358.2 283 63.3
Phvul.001G093500 Phaseolus vulgaris HOM05D006526 ORTHO05D008496 1.5e-96 357.1 304 59.9
Thhalv10000573m.g Eutrema salsugineum HOM05D006526 ORTHO05D008496 1.9e-96 356.7 335 58.2
Glyma.19G091200 Glycine max HOM05D006526 ORTHO05D008496 1.2e-95 354.0 299 60.5
PSO478G2106 Papaver somniferum HOM05D006526 ORTHO05D008496 2.8e-95 352.8 325 59.4
PSO017G5829 Papaver somniferum HOM05D006526 ORTHO05D008496 3.6e-95 352.4 288 64.6
arahy.Tifrunner.gnm1.ann1.4N5YWB Arachis hypogaea HOM05D006526 ORTHO05D008496 1.8e-94 350.1 304 58.6
arahy.Tifrunner.gnm1.ann1.C96CVE Arachis hypogaea HOM05D006526 ORTHO05D008496 1.8e-94 350.1 304 58.6
AUR62003516 Chenopodium quinoa HOM05D006526 ORTHO05D008496 8.9e-94 347.8 323 58.5
Atru.chr6.2570 Acer truncatum HOM05D006526 ORTHO05D008496 3.4e-93 345.9 298 60.4
AUR62017828 Chenopodium quinoa HOM05D006526 ORTHO05D008496 3.4e-93 345.9 332 57.2
Lj1g0010270 Lotus japonicus HOM05D006526 ORTHO05D008496 1.3e-92 344.0 280 62.5
Psat3g163920 Pisum sativum HOM05D006526 ORTHO05D008496 1.9e-91 340.1 288 59.7
CDE05G2481 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 5.4e-91 338.6 288 59.7
Os08g0531300 Oryza sativa ssp. japonica HOM05D006526 ORTHO05D008496 2.7e-90 336.3 287 59.6
Ah.03g147500 Amaranthus hybridus HOM05D006526 ORTHO05D008496 1.1e-88 330.9 255 65.5
Zm00001eb175140 Zea mays HOM05D006526 ORTHO05D008496 4.3e-88 328.9 310 56.5
Hund04346 Selenicereus undatus HOM05D006526 ORTHO05D008496 1.6e-87 327.0 358 52.2
CARHR075020 Cardamine hirsuta HOM05D006526 ORTHO05D008496 1.2e-85 320.9 283 58.7
Haze_14876 Corylus avellana HOM05D006526 ORTHO05D008496 1.7e-81 307.0 317 54.9
CDE06G2358 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 1.9e-80 303.5 265 58.9
Pp3c2_22020 Physcomitrium patens HOM05D006526 ORTHO05D008496 1.9e-80 303.5 284 53.2
AagrBONN_evm.TU.Sc2ySwM_228.1921 Anthoceros agrestis HOM05D006526 ORTHO05D008496 2.1e-79 300.1 273 56.4
CSS0009464 Camellia sinensis var. sinensis HOM05D006526 ORTHO05D008496 5.2e-78 295.4 242 64.5
Gohir.A09G035700 Gossypium hirsutum HOM05D006526 ORTHO05D008496 5.2e-78 295.4 287 54.7
MBI11_g23476_MAGBIO Magnolia biondii HOM05D006526 ORTHO05D008496 4.4e-77 292.4 272 57.4
Sed0022734 Sechium edule HOM05D006526 ORTHO05D008496 1.3e-73 280.8 217 63.6
PGSC0003DMG400020254 Solanum tuberosum HOM05D006526 ORTHO05D008496 8.1e-71 271.6 185 71.4
TPR.G14866 Trifolium pratense HOM05D006526 ORTHO05D008496 5.3e-70 268.9 319 48.9
DCAR_000965 Daucus carota HOM05D006526 ORTHO05D008496 1.2e-69 267.7 201 67.2
SMO137G0097 Selaginella moellendorffii HOM05D006526 ORTHO05D008496 2.0e-69 266.9 325 46.2
VMungo1383G1669 Vigna mungo HOM05D006526 ORTHO05D008496 1.0e-65 254.6 221 60.6
FAN09G0514 Fragaria x ananassa HOM05D002875 ORTHO05D003215 5.6e-64 248.8 324 47.2
TAR629G1757 Trochodendron aralioides HOM05D006526 ORTHO05D008496 9.6e-64 248.1 232 58.2
Sc16g0003120 Simmondsia chinensis HOM05D006526 ORTHO05D008496 1.3e-63 247.7 201 60.7
QL02p071425 Quercus lobata HOM05D006526 ORTHO05D008496 2.8e-63 246.5 186 65.6
Ca_12965_v3 Cicer arietinum L. HOM05D006526 ORTHO05D008496 1.1e-62 244.6 214 58.9
HPP92_001419 Vanilla planifolia HOM05D005553 ORTHO05D008496 1.1e-62 244.6 219 59.4
FAN05G0398 Fragaria x ananassa HOM05D002875 ORTHO05D003215 8.7e-57 224.9 257 51.0
BcaB05g22970 Brassica carinata HOM05D006526 ORTHO05D008496 8.7e-49 198.4 164 57.3
Glyma.16G056500 Glycine max HOM05D006526 ORTHO05D008496 1.5e-45 187.6 181 55.2
Cre01.g015950 Chlamydomonas reinhardtii HOM05D006526 ORTHO05D008496 8.5e-44 181.8 275 40.4
Medtr7g034590 Medicago truncatula HOM05D006526 ORTHO05D008496 2.3e-41 173.7 130 64.6
MCO14G032 Micromonas commoda HOM05D006526 ORTHO05D008496 5.9e-37 159.1 246 36.6
ECA236G2817 Erigeron canadensis HOM05D006526 ORTHO05D008496 2.7e-34 150.2 163 49.1
QL02p071428 Quercus lobata HOM05D006526 ORTHO05D008496 1.4e-30 137.9 124 59.7
Glyma.16G056450 Glycine max HOM05D006526 ORTHO05D008496 5.9e-29 132.5 101 63.4
CDE05G0752 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 1.6e-26 124.4 89 67.4
FAN02G2201 Fragaria x ananassa HOM05D002323 ORTHO05D002470 2.0e-24 117.5 166 41.6
CSS0005086 Camellia sinensis var. sinensis HOM05D006526 ORTHO05D008496 7.4e-24 115.5 97 62.9
Medtr6g045607 Medicago truncatula HOM05D006526 ORTHO05D008496 3.7e-23 113.2 72 68.1
CDE05G3548 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 2.2e-20 104.0 73 68.5
EL10Ac8g19274 Beta vulgaris HOM05D006526 ORTHO05D008496 4.7e-18 96.3 68 70.6
BcaB05g22969 Brassica carinata HOM05D006526 ORTHO05D008496 1.2e-13 81.6 59 66.1
Ca_12964_v3 Cicer arietinum L. HOM05D006526 ORTHO05D008496 2.0e-13 80.9 68 60.3
BraA06t24956Z Brassica rapa HOM05D006526 ORTHO05D024464 5.9e-13 79.3 113 45.1
Medtr6g045617 Medicago truncatula HOM05D006526 ORTHO05D008496 1.0e-12 78.6 56 66.1
CSS0022358 Camellia sinensis var. sinensis HOM05D006526 ORTHO05D008496 1.7e-12 77.8 75 54.7
CSS0047032 Camellia sinensis var. sinensis HOM05D006526 ORTHO05D008496 1.1e-11 75.1 75 52.0
C08p24000 Brassica napus HOM05D006526 ORTHO05D024464 9.4e-11 72.0 83 50.6
CDE04G1482 Ceratophyllum demersum HOM05D006526 ORTHO05D003215 3.0e-09 67.0 63 55.6
BcaC07g39377 Brassica carinata HOM05D006526 ORTHO05D024464 1.5e-08 64.7 68 54.4
BolC8t50022H Brassica oleracea HOM05D006526 ORTHO05D024464 2.8e-07 60.5 55 56.4
A06p18730 Brassica napus HOM05D006526 ORTHO05D024464 1.8e-06 57.8 94 41.5
QL06p007766 Quercus lobata HOM05D006526 ORTHO05D008496 4.1e-06 56.6 41 63.4


User provided reference genes

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