Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold47G17589 Striga asiatica HOM05D008515 ORTHO05D009562 1.7e-232 808.9 399 100.0
SGA_v2.0_scaffold458G51936 Striga asiatica HOM05D008515 ORTHO05D009562 1.4e-186 656.4 352 92.6
SGA_v2.0_scaffold18G08387 Striga asiatica HOM05D008515 ORTHO05D009562 7.4e-42 175.6 267 36.3
SGA_v2.0_scaffold448G51780 Striga asiatica HOM05D008515 ORTHO05D009562 1.7e-41 174.5 267 36.0
SGA_v2.0_scaffold61G21228 Striga asiatica HOM05D008515 ORTHO05D009562 4.8e-41 172.9 310 35.2
SGA_v2.0_scaffold390G50601 Striga asiatica HOM05D008515 ORTHO05D406552 6.3e-41 172.6 347 35.4
SGA_v2.0_scaffold812G53634 Striga asiatica HOM05D008515 ORTHO05D015740 5.0e-38 162.9 333 33.9
SGA_v2.0_scaffold162G37931 Striga asiatica HOM05D008515 ORTHO05D009562 7.2e-37 159.1 213 39.0
SGA_v2.0_scaffold65G22151 Striga asiatica HOM05D008515 ORTHO05D009562 8.5e-30 135.6 324 30.6
SGA_v2.0_scaffold21G09321 Striga asiatica HOM05D008515 ORTHO05D009562 7.2e-29 132.5 265 33.6
SGA_v2.0_scaffold57G20161 Striga asiatica HOM05D008553 ORTHO05D009562 4.1e-24 116.7 263 29.3
SGA_v2.0_scaffold235G43682 Striga asiatica HOM05D008515 ORTHO05D009562 7.0e-24 115.9 280 29.3
SGA_v2.0_scaffold441G51668 Striga asiatica HOM05D008515 ORTHO05D009562 7.0e-24 115.9 191 32.5
SGA_v2.0_scaffold395G50734 Striga asiatica HOM05D008515 ORTHO05D009562 1.0e-22 112.1 283 27.2
SGA_v2.0_scaffold554G52899 Striga asiatica HOM05D008515 ORTHO05D009562 1.0e-22 112.1 283 29.0
SGA_v2.0_scaffold14G06993 Striga asiatica HOM05D008515 ORTHO05D009562 1.5e-21 108.2 230 28.7
SGA_v2.0_scaffold315G48384 Striga asiatica HOM05D008515 ORTHO05D009562 1.6e-20 104.8 201 30.3
SGA_v2.0_scaffold217G42419 Striga asiatica HOM05D008553 ORTHO05D009562 6.1e-20 102.8 217 30.9
SGA_v2.0_scaffold9G04884 Striga asiatica HOM05D008553 ORTHO05D009562 8.0e-20 102.4 195 32.8
SGA_v2.0_scaffold129G34169 Striga asiatica HOM05D008515 ORTHO05D009562 1.4e-19 101.7 211 28.9
SGA_v2.0_scaffold330G48883 Striga asiatica HOM05D008553 ORTHO05D009562 1.8e-19 101.3 196 32.1
SGA_v2.0_scaffold91G27994 Striga asiatica HOM05D008553 ORTHO05D009562 1.8e-19 101.3 221 29.9
SGA_v2.0_scaffold554G52901 Striga asiatica HOM05D008515 ORTHO05D009562 4.0e-19 100.1 276 29.0
SGA_v2.0_scaffold18G08482 Striga asiatica HOM05D008553 ORTHO05D009562 6.8e-19 99.4 206 32.0
SGA_v2.0_scaffold41G15793 Striga asiatica HOM05D008553 ORTHO05D009562 6.8e-19 99.4 215 30.2
SGA_v2.0_scaffold179G39585 Striga asiatica HOM05D008553 ORTHO05D009562 8.8e-19 99.0 191 30.9
SGA_v2.0_scaffold377G50311 Striga asiatica HOM05D008515 ORTHO05D009562 1.5e-18 98.2 183 31.7
SGA_v2.0_scaffold220G42598 Striga asiatica HOM05D008553 ORTHO05D009562 2.0e-18 97.8 196 31.1
SGA_v2.0_scaffold22G09946 Striga asiatica HOM05D008553 ORTHO05D009562 2.0e-18 97.8 179 32.4
SGA_v2.0_scaffold112G31626 Striga asiatica HOM05D008553 ORTHO05D009562 4.4e-18 96.7 215 30.7
SGA_v2.0_scaffold250G44980 Striga asiatica HOM05D008515 ORTHO05D399056 4.4e-18 96.7 135 44.4
SGA_v2.0_scaffold39G15341 Striga asiatica HOM05D008553 ORTHO05D009562 4.4e-18 96.7 217 30.4
SGA_v2.0_scaffold268G46202 Striga asiatica HOM05D008553 ORTHO05D009562 7.5e-18 95.9 195 30.8
SGA_v2.0_scaffold6G03400 Striga asiatica HOM05D008515 ORTHO05D009562 7.5e-18 95.9 282 28.0
SGA_v2.0_scaffold112G31596 Striga asiatica HOM05D008553 ORTHO05D009562 1.7e-17 94.7 227 29.1
SGA_v2.0_scaffold8G04277 Striga asiatica HOM05D008553 ORTHO05D009562 1.7e-17 94.7 202 30.2
SGA_v2.0_scaffold35G14096 Striga asiatica HOM05D008553 ORTHO05D009562 2.2e-17 94.4 215 29.8
SalBow1G7207 Salvia bowleyana HOM05D009014 ORTHO05D358742 2.8e-17 94.0 363 24.8
SGA_v2.0_scaffold43G16242 Striga asiatica HOM05D008515 ORTHO05D009562 3.7e-17 93.6 212 30.2
SGA_v2.0_scaffold53G19373 Striga asiatica HOM05D008515 ORTHO05D009562 3.7e-17 93.6 249 26.5
SGA_v2.0_scaffold113G31756 Striga asiatica HOM05D008553 ORTHO05D009562 4.8e-17 93.2 195 30.3
SGA_v2.0_scaffold33G13517 Striga asiatica HOM05D008553 ORTHO05D009562 4.8e-17 93.2 234 28.6
SGA_v2.0_scaffold1254G53882 Striga asiatica HOM05D008553 ORTHO05D009562 3.1e-16 90.5 149 34.9
SGA_v2.0_scaffold112G31559 Striga asiatica HOM05D008553 ORTHO05D009562 2.0e-15 87.8 125 36.0
SGA_v2.0_scaffold33G13435 Striga asiatica HOM05D008553 ORTHO05D009562 2.7e-15 87.4 192 28.6
SGA_v2.0_scaffold34G13605 Striga asiatica HOM05D008553 ORTHO05D009562 3.5e-15 87.0 123 37.4
SGA_v2.0_scaffold540G52799 Striga asiatica HOM05D008515 ORTHO05D009562 5.9e-15 86.3 131 36.6
SGA_v2.0_scaffold26G11277 Striga asiatica HOM05D008553 ORTHO05D009562 2.2e-14 84.3 222 28.8
SGA_v2.0_scaffold27G11510 Striga asiatica HOM05D008553 ORTHO05D009562 2.9e-14 84.0 187 29.4
SGA_v2.0_scaffold145G36007 Striga asiatica HOM05D008553 ORTHO05D009562 6.5e-14 82.8 134 32.1
SGA_v2.0_scaffold263G45982 Striga asiatica HOM05D023376 ORTHO05D009562 6.5e-14 82.8 150 32.0
SGA_v2.0_scaffold350G49636 Striga asiatica HOM05D008553 ORTHO05D009562 6.5e-14 82.8 121 38.8
SGA_v2.0_scaffold103G30017 Striga asiatica HOM05D008515 ORTHO05D009562 1.9e-13 81.3 212 27.4
SGA_v2.0_scaffold194G40740 Striga asiatica HOM05D008515 ORTHO05D009562 7.2e-13 79.3 228 25.0
SGA_v2.0_scaffold1G00568 Striga asiatica HOM05D023376 ORTHO05D009562 7.2e-13 79.3 200 27.5
SGA_v2.0_scaffold17G08048 Striga asiatica HOM05D008553 ORTHO05D009562 2.1e-12 77.8 215 27.4
SGA_v2.0_scaffold59G20614 Striga asiatica HOM05D008553 ORTHO05D009562 4.7e-12 76.6 116 34.5
SGA_v2.0_scaffold216G42410 Striga asiatica HOM05D023376 ORTHO05D009562 8.0e-12 75.9 186 28.5
SGA_v2.0_scaffold155G37235 Striga asiatica HOM05D008553 ORTHO05D009562 1.0e-11 75.5 129 31.8
SGA_v2.0_scaffold53G19429 Striga asiatica HOM05D008515 ORTHO05D009562 4.0e-11 73.6 131 33.6
EL10Ac8g20298 Beta vulgaris HOM05D008347 ORTHO05D006373 1.2e-10 72.0 211 27.0
EL10Ac8g20301 Beta vulgaris HOM05D008347 ORTHO05D006373 1.2e-10 72.0 211 27.0
SGA_v2.0_scaffold82G26184 Striga asiatica HOM05D008515 ORTHO05D009562 1.5e-10 71.6 85 36.5
SGA_v2.0_scaffold18G08337 Striga asiatica HOM05D008515 ORTHO05D009562 2.0e-10 71.2 114 35.1
EL10Ac4g08035 Beta vulgaris HOM05D008347 ORTHO05D006373 2.6e-10 70.9 211 26.5
EL10Ac6g13718 Beta vulgaris HOM05D008347 ORTHO05D006373 2.6e-10 70.9 192 28.6
SGA_v2.0_scaffold317G48438 Striga asiatica HOM05D008515 ORTHO05D009562 2.6e-10 70.9 282 22.7
SGA_v2.0_scaffold175G39311 Striga asiatica HOM05D008553 ORTHO05D009562 3.4e-10 70.5 163 30.7
SGA_v2.0_scaffold84G26566 Striga asiatica HOM05D008553 ORTHO05D009562 3.4e-10 70.5 83 43.4
SGA_v2.0_scaffold462G51975 Striga asiatica HOM05D008515 ORTHO05D009562 4.4e-10 70.1 193 25.9
EL10Ac8g20299 Beta vulgaris HOM05D008347 ORTHO05D006373 3.7e-09 67.0 153 29.4
SalBow8G5484 Salvia bowleyana HOM05D015342 ORTHO05D015740 4.9e-09 66.6 150 33.3
SGA_v2.0_scaffold235G43681 Striga asiatica HOM05D008515 ORTHO05D009562 8.3e-09 65.9 111 29.7
SGA_v2.0_scaffold26G11406 Striga asiatica HOM05D023376 ORTHO05D009562 1.1e-08 65.5 237 25.3
SGA_v2.0_scaffold26G11425 Striga asiatica HOM05D008553 ORTHO05D009562 1.1e-08 65.5 82 41.5
AUR62037050 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.4e-08 65.1 146 29.5
SalBow8G5486 Salvia bowleyana HOM05D015342 ORTHO05D015740 1.8e-08 64.7 150 32.7
SGA_v2.0_scaffold291G47339 Striga asiatica HOM05D008553 ORTHO05D009562 4.1e-08 63.5 141 27.0
SalBow1G0900 Salvia bowleyana HOM05D015342 ORTHO05D015740 1.6e-07 61.6 267 22.8
SGA_v2.0_scaffold476G52146 Striga asiatica HOM05D008553 ORTHO05D009562 3.5e-07 60.5 96 34.4
AUR62024387 Chenopodium quinoa HOM05D008347 ORTHO05D006373 5.9e-07 59.7 216 25.5
AUR62036520 Chenopodium quinoa HOM05D008347 ORTHO05D006373 7.7e-07 59.3 216 25.0
SGA_v2.0_scaffold127G33998 Striga asiatica HOM05D008553 ORTHO05D009562 7.7e-07 59.3 125 28.8
AUR62022722 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.3e-06 58.5 216 25.0
SGA_v2.0_scaffold33G13529 Striga asiatica HOM05D023517 ORTHO05D399380 2.9e-06 57.4 119 31.9
AUR62030750 Chenopodium quinoa HOM05D008347 ORTHO05D006373 5.0e-06 56.6 132 26.5
SalBow5G4497 Salvia bowleyana HOM05D015342 ORTHO05D015740 5.0e-06 56.6 108 30.6
EL10Ac3g06751 Beta vulgaris HOM05D008347 ORTHO05D006373 8.6e-06 55.8 216 26.4
EL10Ac9g22462 Beta vulgaris HOM05D008347 ORTHO05D006373 8.6e-06 55.8 216 26.4


User provided reference genes

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